Basic Information

Insect: Tenthredo mesomela
Gene Symbol: -
Assembly: GCA_943736035.1
Location: CALSEY010000094.1:101086-113593[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 3.6e-06 0.00074 21.2 1.7 1 23 319 341 319 341 0.98

2 9 3.4e-08 7.1e-06 27.5 1.6 3 23 349 369 347 369 0.98

3 9 0.00026 0.055 15.3 0.4 1 23 375 397 375 397 0.98

4 9 1.5e-06 0.0003 22.4 1.5 1 23 403 425 403 425 0.99

5 9 2.6e-05 0.0053 18.5 1.7 2 23 829 850 828 850 0.96

6 9 3.3e-09 6.9e-07 30.7 1.6 1 23 856 878 856 878 0.98

7 9 0.0014 0.29 13.0 0.4 3 23 886 906 884 906 0.97

8 9 9.9e-05 0.021 16.6 1.4 1 23 912 934 912 934 0.99

9 9 0.022 4.6 9.2 0.8 1 23 940 964 940 964 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	3.6e-06	0.00074	21.2	1.7	1	23	319	341	319	341	0.98
2	9	3.4e-08	7.1e-06	27.5	1.6	3	23	349	369	347	369	0.98
3	9	0.00026	0.055	15.3	0.4	1	23	375	397	375	397	0.98
4	9	1.5e-06	0.0003	22.4	1.5	1	23	403	425	403	425	0.99
5	9	2.6e-05	0.0053	18.5	1.7	2	23	829	850	828	850	0.96
6	9	3.3e-09	6.9e-07	30.7	1.6	1	23	856	878	856	878	0.98
7	9	0.0014	0.29	13.0	0.4	3	23	886	906	884	906	0.97
8	9	9.9e-05	0.021	16.6	1.4	1	23	912	934	912	934	0.99
9	9	0.022	4.6	9.2	0.8	1	23	940	964	940	964	0.95

Sequence Information

Coding Sequence: ATGGCGCTCTCCAGCCGAAATGAGTCTACGTCATATGTGAACCTGTATTATTCTATTGTCCAGCGTGCGGCAACTCGTTACTTTAAGGAATATTACAATTCCGACACAGGCCCCCCATACGTGTTGTATAAAGATAATATGGAGAGAGCCCAGGGGCAGTGGGGTCCGGGGCCGGGATCTCTCcaggatggtggattgtacgcccaacaacaacaacagcagcaacagcagcagcaacagcaacaacagcaacaacaacaacagcagcaacaacaacaacaacaacagcagcagcaaggttcctcgtcgtccggtagcccgcagcaGGCTTGTGGCCCTCCAGTTGAGGGGGAGAGTGGACCTCCGCCCTCGCTAGCCTCCCCAGTCCCCTCACCGTACCCTTCGGCACCTCCCGAGCCTCAGGCCCTGACCCCATCCGATGACGACATCCAGTCTAGCCAAACTACACCTcaacagcagcagacgcagcagcagcagcaagttcagcaacaagttcaacaacaacagcaacaggctcagcagcaacaacaacagcaacaggctcagcaacaacaacaacaacagcaggctcaacaacaggggcattcgccacagcaacaacttacaccgcacgaagttgaacgcggtgatAATTGTTTTCCAGGCAGCGGTGATTTGCAACAATATCCACAACACTACTTCAAAGAAAGTAGACCGCACCCCTCGCCATCCATGCCTTCTCACATGCTGACACCTGGAGGTTTTTCGGCGTTGCATTACCTCAAGCAACCCGGAGTTATGCTGACGTCGCTTGGCCAGGCGGTAGACGGTGGGGCGACCCTAGAAGGTCATCAATACACGGGTCCAGGAGGTCCTAACATGTCGACGGGTTTACCGGACATTGTACAACAGAACGGGAAATCGTCGAAGGGGGCGAACAGCGATCTTAGATTGTTCAAgtgcttgacatgcggtaaagatttcaagcagaagtctaccctgctgcaacacgagaggattcatacggatagcaggccttacgggtgcccggagtgtggaaagcggtttaggcagcaatcgcatcttacccagcatcttcgcatacacgccaacgagaagccctacgcttgcgtttactgcgaacgaaccttcaggcaacgggccatactcaaccagcatctacgcatccactcgggtgagaagccataccaatgtccggagtgcggaaaacactttcgtcagaaggcgatcctgaatcagcacgtccgcacacaccaaggcgagcatttctctctgcctcccagactcccagagggcgtccaccaccgccacaaccacaaccacaaccacaatcacacTGACCATACAACATCACCCTTCACGGCCACCAATGCTTACTTATACAATAACAACAACAACAACAACAACAACAACAACAATAACGACGACGACGACGACGACAACGACGACAACGACAACGACGACGACGACGACGACAACGACGACAACGACAACGACGACGACGACGACGACAATTACAGCTACAACTACAGCTACAACTACAACTACAACTACAACAATAACTACAGTCACAATAATCACAATCACGATCACAGTCACAGCGACACTAACATCCAGGAATTCATTACCTGCCCCGAACCCGAGTCCTTCCTCGCCAACAACCTTGATCACCTGCCCGACGCCCTGTGTCAAATCAGTAAGATCCGGTCCCGCTTGAATGGTTCAATTAGTAGAGGTAGAAAATTGCCAAACGGATACGGTAGTAAGACGGGGCTCGGTTTAAAAAAAAGAAATTCAGGCAGCCGGAGGGTAAGAACGGTTGAGCTGGACGCGAGGGCGCTGGTGAGCTGTGAGATTGGAGAGGAACCTCCCACCTCTGTTTTACCTCTACCTCTACCTCTACATAATCTACCCCTGTCCTCGCCCGTCCTCGAACCACGTCCCTGCAGCGATCCTTCGTATTCCTATTCAAACGCACTCTGCAAGGCTATATCCGCCGCCCTTCCGAGCCTCACCATCACCCCCGTACTACAACCTCAACTAATATCGAACAGACCTCCGCACTCTCCTCAGATTGATCCTTCCGTCAAGGTGGAGGAGGTGGACCTCAGCCTATCATCAGACAATGTGAGTCCGCATCTGATATTTAAGAATGGAATGACGCCGACCCTCTGGCCCCAGGACGTGCCGTTCCCACCGGATCAGGAGGGTGGAAAGGGCGGCAGTGGCGACGCCTCGTCAAACTTCGGTGATTCGGGGGCCTTCAGTCCTACACCGGACTCGGGTTCGATTCAGTATCCAGCGTACTTCAAGGACCCCAAGGGAGGAAATCACGCGGTATTCGGTGCCGGTGGTCCGAGCAGCTTCGGCGCGTTACAATACATAAAGCAGCAGGGCGGTGGCAAGGGATGCCTGCCCGACGTTATACAGCACGGTCGTTcggcgggtatgcccctctatgttagatgcccgatttgtcagaaggaatttaaacagaagtcaacgctgctacaacacggttgtatacacatcgagtccagaccctatccgtgccccgaatgcggcaagagatttcgccagcagtcgcacctcacccaacacctgcgtatccatacgaacgagaaaccttacggttgcgtttattgcgggcgtaattttcgccaacgaacgatcctcaatcaacacgtgcgcattcataccggcgagaagccgtacaagtgccaacagtgcggcaaggactttcgccagaaggctatactcgatcagcacacgcggacccatcaaggagacaggccgttttgctgcccgatgccaaactgcaggcggcgattcgccacggagccagaagtcaagaagcacatcgataaccatatgaatccgcacgctgctaaggtCAGGAGAAACTCTAGCGGTGATACTAAACCGCCGAGTAGTACGCCCACGGGTATTGGTGCCGTGTCGGTACCGCGTGGCATAACGCCTACCGTAGTTAAACCGGAACTATATTTTCCCCAGTGTTACGCCCCAGCCTTTAACCATCAGCCACCAGTGTCGACGGCACAGTTCCCGGTACAGGCGAACGGGGTTTCGGGTGTTACAGGTGAATTCAAACCCCCGTCCGGTATACCACCGCAGTGA
Protein Sequence: MALSSRNESTSYVNLYYSIVQRAATRYFKEYYNSDTGPPYVLYKDNMERAQGQWGPGPGSLQDGGLYAQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQGSSSSGSPQQACGPPVEGESGPPPSLASPVPSPYPSAPPEPQALTPSDDDIQSSQTTPQQQQTQQQQQVQQQVQQQQQQAQQQQQQQQAQQQQQQQQAQQQGHSPQQQLTPHEVERGDNCFPGSGDLQQYPQHYFKESRPHPSPSMPSHMLTPGGFSALHYLKQPGVMLTSLGQAVDGGATLEGHQYTGPGGPNMSTGLPDIVQQNGKSSKGANSDLRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPYACVYCERTFRQRAILNQHLRIHSGEKPYQCPECGKHFRQKAILNQHVRTHQGEHFSLPPRLPEGVHHRHNHNHNHNHTDHTTSPFTATNAYLYNNNNNNNNNNNNNDDDDDDNDDNDNDDDDDDNDDNDNDDDDDDNYSYNYSYNYNYNYNNNYSHNNHNHDHSHSDTNIQEFITCPEPESFLANNLDHLPDALCQISKIRSRLNGSISRGRKLPNGYGSKTGLGLKKRNSGSRRVRTVELDARALVSCEIGEEPPTSVLPLPLPLHNLPLSSPVLEPRPCSDPSYSYSNALCKAISAALPSLTITPVLQPQLISNRPPHSPQIDPSVKVEEVDLSLSSDNVSPHLIFKNGMTPTLWPQDVPFPPDQEGGKGGSGDASSNFGDSGAFSPTPDSGSIQYPAYFKDPKGGNHAVFGAGGPSSFGALQYIKQQGGGKGCLPDVIQHGRSAGMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCVYCGRNFRQRTILNQHVRIHTGEKPYKCQQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHAAKVRRNSSGDTKPPSSTPTGIGAVSVPRGITPTVVKPELYFPQCYAPAFNHQPPVSTAQFPVQANGVSGVTGEFKPPSGIPPQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00939814; iTF_01414413; iTF_00938959; iTF_01411761;
90% Identity: iTF_00939814;
80% Identity: -