Basic Information

Gene Symbol
Iswi_1
Assembly
GCA_943736035.1
Location
CALSEY010000499.1:17391-20519[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1e-05 0.03 15.8 0.0 3 41 799 838 798 838 0.96
2 2 0.0046 12 7.4 0.0 3 21 901 920 899 923 0.90

Sequence Information

Coding Sequence
ATGTCAAAACCGGAGGAAAATGTTGACGCTCCAGAGGCGGGTGATAATTCAAACGGATCATCGGCCGAAACTACATCATCAAGGGGTGGTGATTTCGAAACAAAAATTGAAACCGATAGAAGCAAGAGGTTCGATTATCTGCTTAAACAAACTGAGATATTTTCACACTTTATGACAAACAACCAAAAAGACAAATCCGTAAGTCCGTTAAAAGTAAAAGCCGGACGGCCTAGAAAACAGCCCGAATTGCCAGTCAAAGGCGACACGTCGGCAGATCTAAGACACCGTAAAACCGAACAAGAAGAAGACGAGGAATTATTGGCTGAAAGTAACGTAAGCGTAGCGCCAACAACCCGCTTTGAATCATCACCTCATTACATTAAAAATggggaattacgcgactaccaaatacggggtttaaactggatgatttccttatacgaaaatggtatcaatggtatattggcggacgaaatgggtctgggaaagaccctgcagactatttcgctgctgggatacatgaaacattttcgcagtatcccaggacctcatattgtcattgtaccaaaatctacattagccaattggatgaacgaattcaagaaatggtgtccttctttgagagctgtgtgtcttatcggagatgcagaaacgagaaatacatttattagagacgttatgatgcccggggaatgggacgtgtgcgtaacttcttacgaaatggttatcaaggagaaatcagtattcaaaaaatttaattggagatatatggtgatcgacgaagcgcatagaataaagaatgagaaatcaaagttatctgaaatattgagggagtttaaaacagccaatagacttttgctgactggtacaccattgcagaataatctccacgagctttggtcacttttgaatttcttgttgcctgatgtgttcaatagttccgatgattttgactcttggtttaacacaaacagttttcttggcgataattcattggtcgaaagacttcacgctgttcttagaccgtttcttcttaggcgtcttaaggcagaggtagagaaaggccttaagcctaaaaaggaaataaaagtttacattggattgagtaaaatgcagagagaatggtacactaaagtcttgatgaaagatatcgacattgtaaacggcgctggaaaaatcgaaaaaatgagactacaaaacattctaatgcagctgagaaagtgctgcaatcatccttacctattcgacggggctgaaccaggtcctccttacacaacggatgaacatttggtatacaattgtggaaagatggtcattctggataaacttctgccaaaattaaaacagcaggattctagaatcctgattttcagccagatgactagacagcttgatattttagaggactattgccattggagaaactttcagtattgtagattagacggtaacaccgctcacgaagatcgtcagcgtcaaatcaatgaatacaacgctccaggaagcgagaagttcatctttatgttatccaccagagctggaggtctcggtattaatttagcaactgctgacgtcgtgataatatacgactctgattggaatccccaaatggatttgcaggccatggatcgagcccatcgtatcggacagcaaaaacaagtccgagtattcagattcataactgagaatacagtagaggaaaagatcgtcgagagagctgaggtcaagctacgtttagacaagcttgttattcaacaaggaagattagtagatgcaaaacagaccgctttgaacaaggatgaaatgttgaacatgataagacacggggctaacgaagtatttgcctccaaagacagcgccataaccgatgaagacatcgacacgatcctTCAGAAAGGAGAAGCTAAAACAGAGGAAATGAAACAGAAGCTAGAAAACCTCGGCGAATCATCGTTGAGAAATTTTACTGTCGACGCTCCAACCGATTCGGTCTATCAATTCGAGGGCGAAGACTACAGAGAGAAGCAGAAGATATTGGGAATAGGAAACTGGATCGAACCACCGAAACGAGAGAGAAAGGCAAACTATGCCGTCGACGCTTACTTCAGGGAAGCGCTGAGAGTCTCTGAGCCAAAGGCCCCGAAGGCACCAAGACCACCAAAACAGCCGATTGTACAAGACTTCCAATTCTTTCCACCGCGATTGTTCGAGCTATTAGATCAGGAGATTTACTACTTCAGGCAGACCGTTGGATATAAAGTACCGAAGAATCCTGAACTGGGATCTGATGCGGGTAGAATCCAGAAGGAAGAACAAAGGAAGATCGACGAAGCGCAGCCACTCACAGACGAGGAGTTGGCTGAGAAGGAAAAACTACTTACTCAGGGCTTTACGAATTGGACAAAGAGAGATTTCAACCAGTTTATAAAAGCCAATGAAAAATATGGGCGCGATGATATCGAGAATATCGCTAAAGACGTCGAAGGAAAATCACCTGAAGAAGTAATGGAGTATTCTGCAGTATTTTGGGAGCGATGTCACGAGCTTCAGGATATAGACAGAGTAATGGCGCAGATTGAGCGAGGAGAAGCTAAAATTCAGAGGCGAGCTGGTATCAAGAAGGCTCTTGATGCTAAAATGGCGAGATATAGAGCGCCGTTTCATCAGTTGAGAATAGCCTATGGAACTAACAAGGGGAAGAATTATACCGAGGAAGAGGACAGATTCTTAGTATGCATGCTGCACAAGCTTGGTTTTGACAAAGAGAATGTATACGAAGAATTGAGAGCGACCGTAAGATCAGCTCCGCAATTTCGTTTCGATTGGTTTGTCAAGTCTAGAACAGCTCTTGAACTGCAGAGGAGATGTAACACGTTGATAACGTTGATAGAACGTGAGAATCTGGAATTAGAAGAAAGAGAAAGGCAAGAGAGAAGGAAGAAAGGCGGAAGTATTGGATCAAAACCAGCGTCTAAACGAAAGCAAGAGAATCTTCCAGCACCCCAAGACAAGCCTAGAAAGAAGAAGAAATAA
Protein Sequence
MSKPEENVDAPEAGDNSNGSSAETTSSRGGDFETKIETDRSKRFDYLLKQTEIFSHFMTNNQKDKSVSPLKVKAGRPRKQPELPVKGDTSADLRHRKTEQEEDEELLAESNVSVAPTTRFESSPHYIKNGELRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHFRSIPGPHIVIVPKSTLANWMNEFKKWCPSLRAVCLIGDAETRNTFIRDVMMPGEWDVCVTSYEMVIKEKSVFKKFNWRYMVIDEAHRIKNEKSKLSEILREFKTANRLLLTGTPLQNNLHELWSLLNFLLPDVFNSSDDFDSWFNTNSFLGDNSLVERLHAVLRPFLLRRLKAEVEKGLKPKKEIKVYIGLSKMQREWYTKVLMKDIDIVNGAGKIEKMRLQNILMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNCGKMVILDKLLPKLKQQDSRILIFSQMTRQLDILEDYCHWRNFQYCRLDGNTAHEDRQRQINEYNAPGSEKFIFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQQKQVRVFRFITENTVEEKIVERAEVKLRLDKLVIQQGRLVDAKQTALNKDEMLNMIRHGANEVFASKDSAITDEDIDTILQKGEAKTEEMKQKLENLGESSLRNFTVDAPTDSVYQFEGEDYREKQKILGIGNWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPIVQDFQFFPPRLFELLDQEIYYFRQTVGYKVPKNPELGSDAGRIQKEEQRKIDEAQPLTDEELAEKEKLLTQGFTNWTKRDFNQFIKANEKYGRDDIENIAKDVEGKSPEEVMEYSAVFWERCHELQDIDRVMAQIERGEAKIQRRAGIKKALDAKMARYRAPFHQLRIAYGTNKGKNYTEEEDRFLVCMLHKLGFDKENVYEELRATVRSAPQFRFDWFVKSRTALELQRRCNTLITLIERENLELEERERQERRKKGGSIGSKPASKRKQENLPAPQDKPRKKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00305004;
90% Identity
iTF_00983554;
80% Identity
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