Basic Information

Gene Symbol
snpc-4_1
Assembly
GCA_943736035.1
Location
CALSEY010000214.1:477113-479872[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.072 1.9e+02 3.6 0.0 14 43 250 284 243 287 0.76
2 5 5.2e-10 1.4e-06 29.7 0.1 1 45 293 339 293 340 0.96
3 5 7.9e-10 2.1e-06 29.1 0.2 3 43 350 394 348 396 0.96
4 5 5.2e-11 1.4e-07 32.9 0.0 1 45 403 448 403 449 0.92
5 5 4.1e-10 1.1e-06 30.0 0.2 1 41 453 493 453 494 0.97

Sequence Information

Coding Sequence
ATGAGCGAATCAGAGGATCAAGATGTAATTCTCGACGAGATAAAAGCGTTGCAGGCAGTTTTAACCCAGAAACAAACAGCTAAAGTAAAATTAGAGGTAAGACCGGAAGATAAAATATCGGTTGAACCTAACCTATGCGAACCATCAACATCTAAAATCGGCGATATCTACCCTTCAACGTCTAATACGATTGAAAATTTAGTCAATTTCGAAGCAGAAGAAAGTGACAATGAATGTTCGTCCGAAATCGAAGAGGATGAAGATGATCTATCGGCTTTATCTGACCCCGAAGTTGCGTTAAATTTGAATAAAAAAATCATCAGTCTTCTATCGACGGCTCAAAGTCGACTTCATCTCTTATTAAAAGAATGTAAAAGACGACAAGCACTAATAGACCAAAAAATATGTAAAAGAACGTCCGATCCCCTGACTAGAACGCTTCTAACAATAGCTGGAATTCCTTATTTTAAAGACAAGCAACAATTTCCAGCGCCAAAGAATGAAGATGCTAAATTAAAGGCGAGCCGTGGAGAGTTACAGATTATTGAATTGCCTTGTCCTCTGCGGTGGACATTAAAAGACAGGAATACATTATGGGAAGCAATTTCATGGAACGCTACAGTAATTTCTCACCAAGAAACAAAACTTAAGGATCCCAATGGTTACGATAGCGCGGAGGATCCTCTCAGGCTGGATCATAAATATAGGGACAAAAAGTTACCCGAAGAAATGATTAGGAATATCAAACATTTGGTCGGTCCATTGGGAAGCAAGGAATTCGATTGGTTGAAAATAGCGGCTACAGATTTCAACGGAAGACATTCTGCCAACGAATGTAGGGCAATGTGGAACGTATTTTTACATCCTGATATAAACAAGGGAAAATGGAAAAAGACAGAAGATTCTAATCTCAAATCATTAGCCGAAGAATATAACTTTCAAAATTGGGACGCGGTCGCCAGTAGATTGAGAACTGGGCGAAGCGGATATCAATGCTTTATTAGATTTAATACAAATTTCAAAAACAATATGTTTAGCAGAAGTAGTTCGTGGTCAAAGGAAGAGGATCAGAAACTTACGGACACTGTAAACGCGTTGAGAACTGGTAATTTCATTCCATGGGGAGAAGTAGCTAAAGAAATGGGAAACAGAAGGAAACAACAGATTTATATGCGGTGGAATTACAGCATAGCACCTAACTTGAAAAAGGGCAGATTCACAGAGGAAGAGGATAGGCTGTTACTCGAAGGAGTTGCTAAGTTCGGATCTAACTTTACTAAAATTTCTGTCCTTCTATTGCCACAGAGAAATACTGCGCAGTTAAACGATCACTACAGAACTCTTATGAATGAGAAAAAGAACGATTGGAATTGCGAGGACGACATGAAGCTGGTCAAGTTATACGACAAGTTTGCGAACAATTGGTCCGCTATTGCTAAGGAGTTTTCAAACAAGTCTAGAGTCCAAGTCAGACATCGTCATACCGCGATTATCAGATATCTTAGCAGAGGCCTTTCGATAAGGACTATACCTAGGTGGGGTACAAAGACGGAAGAGGAATTTACTCCGGAAGATATATTGACCCGTGGAGAAAAGATGTTGAATGAGATGAGCGAGATGATAAGAATACAGCAGAAGAAGAAAGAGGCTGCGAAGAGAGACGCTATGCCTAAGATAGACCAGGAACTAAAAGATTATTTCAAAGCGATGTATCAATCTGCCTCTAAGCCCGGAAGACACAAAAAATTTTATTCTGCTCAAGAGGTTGACGAAAAAACTCAGAAGCTTAACGTCATTTTGAATATGTTGAAAGCTGATATTAATATTCCTGATGATTTAACGGAGGACATATTCTTGACGGAGAAAGACAAGCAGCTACTCATTTCTTTGAAAGAATATTCAAAAAGTGAGAGCTTAACGTCTGAGGAGCGACCAAAATACATTGAATACATCAGGCGGAAGATGTTCGGATCTTCAATGCCGTCGACTGGTGATGTTCGTTTCATACCGCCATTACCATTCGATGGAAAAGTACAAAGGACTAAGAGAAGAAAGCTCGTAGGAATTGACTATCGTCCTAGCGGAGATAAATGTCTCGCCGAAATACCTCAAGAATTTGATACATCAGATACAATTATATCGTTGCTCGGCGGATGGGAAATTGAACTAGAATTTCGAAATATGGAGAAGCTATTTATTTCCAAGACTGAACAATCCAGAGAAAATAAGACTAGGAAATGGCGCAATTTGATCGATACTATTGATCAAAATGCCCCAAGTACTTCAGGTATTGTTACCAATGAAAGTAGTAACGTTGGGGCTGAAATTCCATCAAGACCAGATCAATTATCTCCTCAAATACTCAGAAGAATGTCTAAATATTATCCGGAAGTTTTTATACCACCAAACTATGTGACGTTGTTAGGTTTTCGCGGACTATTATTATCCAAACATATTCTTGAGGCAGAGGCTCCGGATGAAGACGAATACGAAGAAAAAGAATGCGCAATGACGCCAGAGGGAGAAAAAGTTTTGGAATTATTTGAGGAACGTCTGGTTAAACTATTCAAATTTCCTATAGAATTATCAGAAGTAGCACCGCCTCTGTTACACTCATTACAAAATGGGGAATTACTTGATTCCGACGATGATGTTCGCGCGAAAAAACGTAAATCAAGTAAAAAAAACTCTGGCCCAGCAGCTAAGAGAAACCCAAAATTCGAAAGAGTTAATATTAAAGAAAATCCCGAGGCTCAATAA
Protein Sequence
MSESEDQDVILDEIKALQAVLTQKQTAKVKLEVRPEDKISVEPNLCEPSTSKIGDIYPSTSNTIENLVNFEAEESDNECSSEIEEDEDDLSALSDPEVALNLNKKIISLLSTAQSRLHLLLKECKRRQALIDQKICKRTSDPLTRTLLTIAGIPYFKDKQQFPAPKNEDAKLKASRGELQIIELPCPLRWTLKDRNTLWEAISWNATVISHQETKLKDPNGYDSAEDPLRLDHKYRDKKLPEEMIRNIKHLVGPLGSKEFDWLKIAATDFNGRHSANECRAMWNVFLHPDINKGKWKKTEDSNLKSLAEEYNFQNWDAVASRLRTGRSGYQCFIRFNTNFKNNMFSRSSSWSKEEDQKLTDTVNALRTGNFIPWGEVAKEMGNRRKQQIYMRWNYSIAPNLKKGRFTEEEDRLLLEGVAKFGSNFTKISVLLLPQRNTAQLNDHYRTLMNEKKNDWNCEDDMKLVKLYDKFANNWSAIAKEFSNKSRVQVRHRHTAIIRYLSRGLSIRTIPRWGTKTEEEFTPEDILTRGEKMLNEMSEMIRIQQKKKEAAKRDAMPKIDQELKDYFKAMYQSASKPGRHKKFYSAQEVDEKTQKLNVILNMLKADINIPDDLTEDIFLTEKDKQLLISLKEYSKSESLTSEERPKYIEYIRRKMFGSSMPSTGDVRFIPPLPFDGKVQRTKRRKLVGIDYRPSGDKCLAEIPQEFDTSDTIISLLGGWEIELEFRNMEKLFISKTEQSRENKTRKWRNLIDTIDQNAPSTSGIVTNESSNVGAEIPSRPDQLSPQILRRMSKYYPEVFIPPNYVTLLGFRGLLLSKHILEAEAPDEDEYEEKECAMTPEGEKVLELFEERLVKLFKFPIELSEVAPPLLHSLQNGELLDSDDDVRAKKRKSSKKNSGPAAKRNPKFERVNIKENPEAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01414102;
90% Identity
-
80% Identity
-