Tmes017537.1
Basic Information
- Insect
- Tenthredo mesomela
- Gene Symbol
- bab2
- Assembly
- GCA_943736035.1
- Location
- CALSEY010000209.1:253936-255854[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.5e-07 0.00012 23.0 0.0 1 39 282 320 282 326 0.91
Sequence Information
- Coding Sequence
- ATGGAATCTGGAAACAATTTACCCACCGCGGATAATTATCCTGGTGACGATCGTcagcaattttgtgtatcatggaattctcatcaatcgaatatgcacaatgcatttccaaaattgttgagctctgaacaatttgttgatgtcacattggcctgcgacggcggttccataaaatgccacaaggttgtactatcagcctgtagcgattatctcgaacgtttactactggatattccatgcactcatccaataatatttctgagggatatgagaatgtgggaacttcaggcattagttgaattcatgtatcgaggagaggtatacgtcgaacaacaacaattggctaagttaatgcaagctgctgaagctttgcagGTGCGTGGTCTGTCGAATCAAGGAAAAGACAATGCAGATTCTAGCCCAGAATCTAGCTCCCAACAATCTAATACTCCTGTGACGCCAACAATACCAATAAAACAAGTATCTACCCAGAATGTGAAGAATGAAGAAGCGCTTGTAATCGATGCAAACAACACAAGCTTCCTTGAATGCACACCGACAATTGTATCACCTCAAACAGTTCCTTCAGCTGCACCAAGCGCAACTCAAAACACTCAAAGTTCAGTAAATATGGAACATACGGAGGCGTTGCATCATCTTGAAAAAGCGTTGAGCGCTTGCGAAGCCACTCTTACCGAGACTCAGGGTCTGGTCAAAATGGAACCTGATGAACAATTTAATCATGATCATAAACCATACTCTATCAGTATGGTTCGCACTACTAATTGCACCCCAGGCAGCCCGTTTCCAGCTATTGAAGGCTACCAAAGACGACAACGGCGTTCTGAAGAAGAACTGAAACAAGCTTCGGACATGGTAGCACGTGGCATGACGTTCCAAGTTGCTTCTGAAAAGTACAACATCCCAATCAGCACGATTCGTTTCTATATGGTACGCAAAGGTATTTTACAAAGGAGAAAACGCGGGCGTGGATCTAACAGCCTTGGTCTAAACAGCCAGCCTGGTAGTCCTGCAAGCCCGCCCTTCCACATGATGAACTACCGATTGCCGGAGAGCCTGAATACCAGTTTACCGTAG
- Protein Sequence
- MESGNNLPTADNYPGDDRQQFCVSWNSHQSNMHNAFPKLLSSEQFVDVTLACDGGSIKCHKVVLSACSDYLERLLLDIPCTHPIIFLRDMRMWELQALVEFMYRGEVYVEQQQLAKLMQAAEALQVRGLSNQGKDNADSSPESSSQQSNTPVTPTIPIKQVSTQNVKNEEALVIDANNTSFLECTPTIVSPQTVPSAAPSATQNTQSSVNMEHTEALHHLEKALSACEATLTETQGLVKMEPDEQFNHDHKPYSISMVRTTNCTPGSPFPAIEGYQRRQRRSEEELKQASDMVARGMTFQVASEKYNIPISTIRFYMVRKGILQRRKRGRGSNSLGLNSQPGSPASPPFHMMNYRLPESLNTSLP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00939742;
- 90% Identity
- iTF_00938883;
- 80% Identity
- iTF_01413495;