Tmes013749.2
Basic Information
- Insect
- Tenthredo mesomela
- Gene Symbol
- lola
- Assembly
- GCA_943736035.1
- Location
- CALSEY010000142.1:307177-311284[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-08 2e-05 25.6 0.1 9 40 422 454 421 459 0.87
Sequence Information
- Coding Sequence
- ATGGAAGACGACCAAcagttctgccttagatggaataaccaccaaagcacacttatacagaatttcgacacacttctggaaagcggcacattagttgactgcactttggcggcggaggggaaatatttaaaggcccacaaagtagtcctctccgcgtgcagtccttactttgagggcctcctcagcgaacactatgacaagcacccagttttcatactgaaagatgttaaattcaaagagctcaaagccatgatggactacatgtacaggggggaagtaaacatctcccaagaccaattggcagcacttctgaaagccgctgaatctttacaaataaaaggactttcggaaagtaaaagtggcgGAGGTGGAGGAGGTagcggtagcggcagcagttgtaatagtaaaacagaacaaagacaattacaacaacaacaacagcaacaacaacagcagcaacaacaacaacaacaaaaaGTTCCATCGTCTTCACAATCCATAGCACAATCGTTAGACATTCCACATTCGTCTTCCGGTCTCACTATTGAAAAGAACATTAAAGTTCCTAGGCAGAGTCTGTCACAGACGTCGGTAGATCTACCAGAAGATTCTGCCAGCCCACAAATTTCAAGAGGGCTATCCTCCAGGGAAGGCTCGCTAAGTCCAACGTCGTTAAGAAAAAGAAAAAAATTGCGAAGAAGAAGTATCGGGGAAGATAATTCTATCGAAAATCATGAGGCTTCTAATTCAAGCGATATTTCACACTCTATGAGTGTACCCGCACTTGGTATGACCCCTGTTGCAGATGAGAAAGTTCACGCAGATCCTACAGATTCACTTGGACGATCTGCACTCATGCAACAACTTACCAAACCTGCGGACGAAATGCTTCAGATGCCAATTGAGAAACCAGAGCCCAATGACAACTTAATAGAGCCAAAGTCAGAGTACCTGGAGGACCCGGAGGAGAGTGTTGAAGACTTAACACTCGATGACGATATGAATGACCTCAACGAAATGGAACAAGATAATCCTAGAGCTGGCCCATCCCACGACCCCAACCAACACCCTGGTGGGGGGGCGGACATGCCAGTTCGATCGATCGGGGATTCGGGTGGTGCCCTTTGGGCAACGCATTTCCTTGATTATAAAAAAGGGCCTAACGTCCGTCGGCCACGTCCCGACGTAGATGTAGGCGCGTTGCTTAAATCCCTGGCTAACAAACAGGGGAGAAAGTATAGTTTAGATTCGGTTAAAATGTCATTGGAAGCGATTTTGCAACAAGGTGTTAGCACCACTCAGGCTTCTGAAATGTATGGAATAAATAGATCGACGTTACAATTTTATCTGAAAAAATTGAACGTCGTTAGGAGACGGTGGCGACAACCGCAGACATGGGTTCAGTATCGGCAATCATAA
- Protein Sequence
- MEDDQQFCLRWNNHQSTLIQNFDTLLESGTLVDCTLAAEGKYLKAHKVVLSACSPYFEGLLSEHYDKHPVFILKDVKFKELKAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSESKSGGGGGGSGSGSSCNSKTEQRQLQQQQQQQQQQQQQQQQKVPSSSQSIAQSLDIPHSSSGLTIEKNIKVPRQSLSQTSVDLPEDSASPQISRGLSSREGSLSPTSLRKRKKLRRRSIGEDNSIENHEASNSSDISHSMSVPALGMTPVADEKVHADPTDSLGRSALMQQLTKPADEMLQMPIEKPEPNDNLIEPKSEYLEDPEESVEDLTLDDDMNDLNEMEQDNPRAGPSHDPNQHPGGGADMPVRSIGDSGGALWATHFLDYKKGPNVRRPRPDVDVGALLKSLANKQGRKYSLDSVKMSLEAILQQGVSTTQASEMYGINRSTLQFYLKKLNVVRRRWRQPQTWVQYRQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01411637;
- 90% Identity
- iTF_00938856;
- 80% Identity
- iTF_01413468;