Tmes034464.1
Basic Information
- Insect
- Tenthredo mesomela
- Gene Symbol
- -
- Assembly
- GCA_943736035.1
- Location
- CALSEY010000691.1:177585-178892[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-08 1.9e-05 25.6 0.0 1 39 18 57 18 61 0.85 2 2 6.8 3.3e+03 -0.7 0.0 12 23 138 150 136 151 0.75
Sequence Information
- Coding Sequence
- ATGCCTCGTAAATACGCCCGTAAGAGCAACATTCCGGAGCGAGCCTGCTGGACAGAAAATCGATTAGCAGAAGCTGTGACCCTGCTCAAAGATGGATTGATATCTCAAAGAGAGGCTTCGAGACGTTATAATGTCCCAGTGCGAACATTGGTTCGTCGAATGAAAAGTGGGAATCTAATTAAAGGAACTCTTGGACCCCAAGGTTGCTTGGGTGCGGAGAATGAAAAAAGATTAGTGGCTCACATCTTACAGTTGGCAGAGGCTGGCTTCGCTCCGACGAGAGATACGGTACGCACCCTGGCCTATGAATTTGCTGCGAAGCTGAATTTGAACCATAAGTTTTCAGCTGACAATTGTAAAGCTGGAAGAGCGTGGCTGAGATCGTTTTTGGAAAGACACCCTGCACTATCAATACGTCACTCGGAGGGATTATCAGTTGCCAGAGCTCAAGGCATGTGTAGACAAGAAGTTGATCAATATTTCAAACTTTTGGACGAGATACTGCAGAAAAATAATATTTTCGAAAAACCGAAACACATATTCAACATGGACGAGTCTGGTATACAGCTCATAaataaaccagggaaagttataacaaagaaaggtgccaaggacgtccacgttttaactactcgcgaaagaggtgagaatatctccttaatagcttgttgtaacgcagaagggacatttcttcccccggtactcatattgaaaggagtcaacaagaaaccagaatttgccgatggacttccccatggctcagacgtttacatgaataagaaatcatccttcatcaactcagatctattccttcggtggttgaaagaacattttatcccacgtaaacctcctggaaaggtactcttgatcttagacgggcacacttcacataacaatgctattgatatgctcgaacttgcagaacaaaatgatatcatcctactatgcctgccaagtcacactacacaGGCGCTTCAGCCCTTGGATAAAAGTTTCTTCGGTCCTTTGAAAACCTACTTCAATCAGGCAGCACATCGATGGATTCGCAGTCACAGCAACAGAAATCTAACCAGATATCAAGCTGGTCATCTCATCGGGGAGGCTTGGTCAAAAGCAGCATCGGTTGGGAACGGTGTGGCTGCCCTGTTAAAAATTCCAACAGAAATCCGTCAGAAGCTCACAGAATCCTCATGTCAAACTTATGAGAATTTAACAGAATCCTATCCGTTCCATCTGCGACAAATAACCGATGATTGCATTTCAATCCGTGTCTATACGTCTAATATCTGCACAGCCATATATCTTTAA
- Protein Sequence
- MPRKYARKSNIPERACWTENRLAEAVTLLKDGLISQREASRRYNVPVRTLVRRMKSGNLIKGTLGPQGCLGAENEKRLVAHILQLAEAGFAPTRDTVRTLAYEFAAKLNLNHKFSADNCKAGRAWLRSFLERHPALSIRHSEGLSVARAQGMCRQEVDQYFKLLDEILQKNNIFEKPKHIFNMDESGIQLINKPGKVITKKGAKDVHVLTTRERGENISLIACCNAEGTFLPPVLILKGVNKKPEFADGLPHGSDVYMNKKSSFINSDLFLRWLKEHFIPRKPPGKVLLILDGHTSHNNAIDMLELAEQNDIILLCLPSHTTQALQPLDKSFFGPLKTYFNQAAHRWIRSHSNRNLTRYQAGHLIGEAWSKAASVGNGVAALLKIPTEIRQKLTESSCQTYENLTESYPFHLRQITDDCISIRVYTSNICTAIYL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01413072;
- 90% Identity
- -
- 80% Identity
- -