Tmes010340.1
Basic Information
- Insect
- Tenthredo mesomela
- Gene Symbol
- -
- Assembly
- GCA_943736035.1
- Location
- CALSEY010000098.1:53406-55337[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-08 5.1e-06 27.5 0.0 5 41 23 60 20 63 0.85 2 2 3.5 1.7e+03 0.2 0.1 11 26 375 389 373 389 0.92
Sequence Information
- Coding Sequence
- ATGCCAAGAAAATACAACAAAAAAGTTACCGACGTCTGCACGCGGGGACAGTGGTCTGCAGCAGATCTCAAAGAGGCTGTCCGAAGATTGGATGCTGGCGAAATAGGTGTCAATGAGGCTTCTAGGTATTACGATATACCTAAACGGACGCTCTGCCGAAGAAGAAAATCTCAAAACTTGGAAAAACGGTCATTAGGGCCACAAGCGTGCTTGGGTTTTGATAACGAAAAACGCCTTGTTGCACATATACAAAGACTCGAAAAATGTGGCTTCGCACCCGATCGGAAAGCGGTGCGCTGTTTGGCGTTTCAGTTCGCCGAGAAACTTGGTATTAAACACAGGTTTAATAGAGAGAAACAGTGCGCAGGATACGATTGGCTGCTGTCATTTTTAGAAAGAAACAAAGAACTCACGATAAGACAGTCAGAAGGTTTGTCAGTGGCACGTGCGCAGGGATTCTGCAGAGAAGAAATCCAGCAAttttttgacttactactcaaaatttacacagagcacgactttttcaataaaccagagaatatatacaatatggacgaatccggcctacaactcaacaacaaaccaggaaaagtgatcgcaactaaaggcgctaaggatgttcacgtcgttacatctgctgaaagaggagaaaacgttactgttatcgcgtgctgtaatgctgaaggtgcatttctccctccagtccttataatgaaaggaaaacgacaaaagccagaattttcggatggactaccgcccggttctaaaatatatatgaacgaaaagtcatcgtacgtcaactcggaattatttttaacatggttaaaggaacatttcgtgcccagaaaatctcccggaaaagttattttgctactagacggacacacgtcccataccaccgccttagacatgctcgaatttgcagacgccaatgacataatattattatgtttaccTAGTCACACCACCCAAGCCCTACAGCCGCTGGACAGAGCGTTTTTTAAGCCGTTGAAGGATTACTTCAGAGGAGCTACCCAAAACTGGATGCTACATAACGCCCAACGAAAAATAACTAGATTACAAGCAGGACAGCTCATCGGACAGGCTTGGATAAAAGCAACCTCTGTGCAGACAGGGATTTCCGGTTTCAAGGCAGCGGGAATATATCCCTACGATCCGCAAGCGATACCCGATCACTTTTTCGCCATTTCAGATATCTCCCAAAGTGCCAATGAACTAGTCAGGCAGAACTTGAAGCCTACAGAACTTGAAGAAACAGACCCTGTAGAATCCGTTCCTGGACCTTCCACCGTTCCTAACTCTCAGGGCGCAGGTGGAAAATCATCGATGACTGTTGAACCTGAAAGAGACATAGTATCACCTACCGAACAGTTGATGGAAATCCTACCATTACCACGAATTCCGATACCATTCAATAAAAGACGTAAGCAGTCTGCTGAAATATTGACTACAGCTGAGAAAATTCAAGAGCAACGATCGAAGCTAGCTGAAAAACTCGACCAAAATTCAACGAAACCAGCTCCCAAAGAAAAAAAGGTTGACAAATTGAAAGTAAAAAATAATCGAAATACGCCAAAAAGGAACGCGGGGAAAGAAAATGCACTACCTAAGATAAAAGTAAAAAAAGAAAATACCTCAGCCAAGAGAAAGTCTTACAAAGGAAAAAATAAAACGACAACGAAATCTTCTGCAGATGAAAGCGATTTGGAAACATCTTCTCATTCTATAAGCGACTATGAAGATTATTGCGTAGAATGTTTGGAAAAGTATACCGAGACAAAACAGAAGGTGGATTGGGTGCAATGTCTCAAATGTGAAGAATGGATGCACGAAACGTGCACCATTTATAAAGATAAGTGCAATGCCTGCGGACGTCAGGAAAAACGTACCAAAGTTGTTAAGAAACATTAG
- Protein Sequence
- MPRKYNKKVTDVCTRGQWSAADLKEAVRRLDAGEIGVNEASRYYDIPKRTLCRRRKSQNLEKRSLGPQACLGFDNEKRLVAHIQRLEKCGFAPDRKAVRCLAFQFAEKLGIKHRFNREKQCAGYDWLLSFLERNKELTIRQSEGLSVARAQGFCREEIQQFFDLLLKIYTEHDFFNKPENIYNMDESGLQLNNKPGKVIATKGAKDVHVVTSAERGENVTVIACCNAEGAFLPPVLIMKGKRQKPEFSDGLPPGSKIYMNEKSSYVNSELFLTWLKEHFVPRKSPGKVILLLDGHTSHTTALDMLEFADANDIILLCLPSHTTQALQPLDRAFFKPLKDYFRGATQNWMLHNAQRKITRLQAGQLIGQAWIKATSVQTGISGFKAAGIYPYDPQAIPDHFFAISDISQSANELVRQNLKPTELEETDPVESVPGPSTVPNSQGAGGKSSMTVEPERDIVSPTEQLMEILPLPRIPIPFNKRRKQSAEILTTAEKIQEQRSKLAEKLDQNSTKPAPKEKKVDKLKVKNNRNTPKRNAGKENALPKIKVKKENTSAKRKSYKGKNKTTTKSSADESDLETSSHSISDYEDYCVECLEKYTETKQKVDWVQCLKCEEWMHETCTIYKDKCNACGRQEKRTKVVKKH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01413062;
- 90% Identity
- iTF_01413062;
- 80% Identity
- iTF_01413063;