Tmes026486.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tenthredo mesomela
Gene Symbol
-
Assembly
GCA_943736035.1
Location
CALSEY010000408.1:355109-357647[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.6e-10 1.3e-07 32.6 0.0 1 36 17 52 17 61 0.87

Sequence Information

Coding Sequence
ATGAATGGGAAAAGGAAGAGTGATCGACCATACAAACGGTTCCGATATTCAGAAGATGACTTGAAAAAAGCTTTGGAAGCTGTTCGTCACGGACTAATCTCAgctaataaagcatccaaagaatatcatattccaaaaggtactttgatcaacaaattacacgaaactgttccgagtgagaggaaaatgggaccacccacagtgcttacgaacgatgaagaaaagcgtataaagaattggataattgataaagcgaaagttggttaccctatgcatgctgaggaagtcaaggacgcagtacaaaaaattttaaaagacaccaagaaagaaaatccttttcatgatgatcgcccagggaaaaaatggatcgaactatttctcaaacggcatccggatattcgggcaaaaaatacagaaattatatctaaaggcagagcatccgtaaccgaaaaaaagattcgtgattggttttctgaaattaaggaatttctcgattctgtaaatgcgacagacatcctagacgatcctagacgaatatttaattctgatgaaacaggcgtacagctgtgtccgaaatctggaaagctgcttggtcctaagtcgtataaaaatttacatgaagttgctgcagggtccgaaaaagagtgcgtaacagtgttatgtacattttctgcgaacggtgaatctgtcgaccctctaatactctacccatataagagaattccagcagcgatagcacagacaattcctgacggagtcgcgatcggaagaagcgatagtggctggatgattagctctactttctatgagtatatctcgaacgttttttatctttggttgatcaaagaaggtgtacaattaccggtcctgtttttccaagacggtcacaaatcacatattaatctggaaactgccgagttctgtgccgcaaaacaaatccatctggtttgcttatatccaaatgccacccacattcttcaaccctgtgacatagcaatttttcggcccttgaaAGTAGAATGGAAGAAAGTAGTGAGATCCCACAAGCAATCGTCATCCAAGAATATAACTAAAGGATCTTTCGCATCTTTCTTTATTAAAGCCTATAAGACAGCAATTAAAGAGACCACGATCAGAAATGAATTTAGAATTTGCGGCTTGTATCCTTTCAATCCCGACAACGTTGACTATTCGAAATGTATGGCAAACAGATGGAAAGAATTGTCCAAAAGTCAAGAAGTATTCAATAATGATGACATGGTCGCCAACGAACCCTTCTTCAATAAATTAGAATCATTCATGCCATCCGATGTTTTGAATAATTTTCGAGAAATGCATCAAGCACGGACGATGCCCGCTAGTGACAAGATCTTGTTTGGAATTTGGAAAAACTGTCAGAGTAGTGTTAGCGACATTGCATACACTGATGCAGCAGGTACCGAGGAACCCGCGGGTGCAGGGATTAGTATCGATAATATCGGAACAAACGTCTTCGCAGAGAATCAGCCCTTCCATATCCAAGATGCGCGGGTTCTTCCAGGTTGCGAACAGATTTTTGATACGCCAAATGATCTCACCTCATCTACACATCGAGGAGACGACGACATCCCACAGCCACGAGAAATAATTTTTGAATCAGCACCAGAAATAACTGACGCAATAATTATCACTACGGTTGATGATATGGAAACGGAAGGATTTGTGATTGATTTTCCTTTCAACGAGTTGACACAACTAGAAAATGAGATAGAAAATGAGATGGCTCGCAAAGATGATGGTCTTAACATTTTAGAGATAAATGACCTACCAATTATTCCTTCAGAATACACTATAAACAGCATCGTTCCTGCGGAAGACGCTTCAAACGAGGCCGTTCCTTGTGAAAAAAACTACAATCATCTTCCTTCGAAAGATGCTCTGAACGACGCCGTTCCTCTGGAAAAAGCTACAAACGACATCGTTTCTTCGGAAGACGCTACGACGGCTAGAATTGACGTGTCGACTAGATGTAGCGATAGCATCAATATGAAAAAACAACGGTTAACTGAACATATCGACCGCGATGTATGGAGAAAGCACTTGCACTTTCCAAAACAGGATTCTAAGAAACAGGAGAAGCGGGAAACTATAAAGACTCCGTTCGCCATTTCGTCAACTGAATACCGACGACAGTGTTCTGAAAAAATAAGAATTCAAACTGAGAAAGATGAGAAAAAAGAAAGAATGAAACTAGAAGGCGCAGAAAAACGAGAACAAAAACAAAAATTGCTTGACGAAAAGCGTAAACAGAAAGCAGAAGATGCACTGAAAAGAGCAGAGGTTGCGCTAAAGAAAGCGGAGGATGCCAGAAGGAAGGCAGAGGATTTGCAAGCGAAGAAGGATCAGCCCACGAAAGTTATTACAAAGAAATGTAGAAAAGGTGATTCAAATAACATTGAAAATCAGTCTCCTAACAAGAAAAAGAAAACTGATATCTAA
Protein Sequence
MNGKRKSDRPYKRFRYSEDDLKKALEAVRHGLISANKASKEYHIPKGTLINKLHETVPSERKMGPPTVLTNDEEKRIKNWIIDKAKVGYPMHAEEVKDAVQKILKDTKKENPFHDDRPGKKWIELFLKRHPDIRAKNTEIISKGRASVTEKKIRDWFSEIKEFLDSVNATDILDDPRRIFNSDETGVQLCPKSGKLLGPKSYKNLHEVAAGSEKECVTVLCTFSANGESVDPLILYPYKRIPAAIAQTIPDGVAIGRSDSGWMISSTFYEYISNVFYLWLIKEGVQLPVLFFQDGHKSHINLETAEFCAAKQIHLVCLYPNATHILQPCDIAIFRPLKVEWKKVVRSHKQSSSKNITKGSFASFFIKAYKTAIKETTIRNEFRICGLYPFNPDNVDYSKCMANRWKELSKSQEVFNNDDMVANEPFFNKLESFMPSDVLNNFREMHQARTMPASDKILFGIWKNCQSSVSDIAYTDAAGTEEPAGAGISIDNIGTNVFAENQPFHIQDARVLPGCEQIFDTPNDLTSSTHRGDDDIPQPREIIFESAPEITDAIIITTVDDMETEGFVIDFPFNELTQLENEIENEMARKDDGLNILEINDLPIIPSEYTINSIVPAEDASNEAVPCEKNYNHLPSKDALNDAVPLEKATNDIVSSEDATTARIDVSTRCSDSINMKKQRLTEHIDRDVWRKHLHFPKQDSKKQEKRETIKTPFAISSTEYRRQCSEKIRIQTEKDEKKERMKLEGAEKREQKQKLLDEKRKQKAEDALKRAEVALKKAEDARRKAEDLQAKKDQPTKVITKKCRKGDSNNIENQSPNKKKKTDI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01413040; iTF_01413044; iTF_01303259; iTF_01303256; iTF_01303257; iTF_01303258;
90% Identity
iTF_01413044;
80% Identity
-