Basic Information

Gene Symbol
ct
Assembly
GCA_943736035.1
Location
CALSEY010000018.1:4324996-4338263[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.3e-27 1.3e-23 84.2 0.0 2 72 394 465 393 470 0.95
2 3 2.3e-32 2.2e-28 99.4 0.0 2 77 803 879 802 881 0.96
3 3 1.3e-30 1.2e-26 93.8 0.0 3 75 1036 1109 1034 1113 0.95

Sequence Information

Coding Sequence
ATGAGACTTGAACAGATCAGTCAGTTGGGTGAAGAAGTGACGAGACTACAACAGAGTATTCAACGGCTTCAAGAGACCAGTGCCCAAGCTACGGCCCGCCTAGAAGAAGAGCTTGAATTGCGCAGACAACACATAAACAGACTGGAAGCTAGACTCGAGAGACAAAGAGACTATGATGACTTGAAACGCGAAATTAGCGTTTTGAGATCGGTGGATTTCTCCCAAATACCAACCGGGGAGCCGGGAAAAAGCCTCGAACATCTTCTCATTGAAAGAACGAAAGCTCTTCAACAAACCGAGAGCTTGAAGCCACCCACAACGCCGGACGCACTTGGTGGCCTTGCTTCCCCCTTGCAGCGAGCCGCGACCTCCTCGCCCCACGGCGGCAACGCGCTACCCTCAGCATCCCAACCACCACCACCGCCACCACCACCACCACCTTTACCAGCCCCGACCCGTTCTACCCCGACCCCTTCTTCGGCGACCTCTTCGTCCTCCTTACTGTTCCATCCGCCGCTCCAAAACGTGGAGACGTTCGGCTCATTCCTCGGCGAGGAGATCGTCGCCAACTGGAGGCGGTCCCTGGAGAGGTCTATCATGAGTCAGCAGCATCCCCAAGTCTCGCAAAGCCAGCCTCAGCTGTTGCACGGGCCCTCGTTAAACCATCTTCCGTCACCGACAGATTCGACGAACACTGCACCGGCAAAGTCAAACACACCACTGGGTAGCGGTTTGGATGCTTCGGAAAAAGCACCGACGCCAATTCCTGGCCTGGAGATACCAGCACCACCTACACCATCTTCGACAGCCGGTCTGACGTCACCACCCAGCCTTCAACCACCCCCTGTCGTAATTGAGCAGCAGCAGCAGCAGCAGCAACAGCAGCCACCACCACCGTCCATGAACGGCATACCGCCAAAGAGTCCAGTGGAGGAGTCCTGCCACAACAACAACAACTCACATCATTTGACCAACAACAATATCGGCGGTGGTCTTAGCGTACTGGACACCCTGAAGAGCCCGTTTCGTTTCGACGACCACAGGGCGCATTTTCGATTCGCTGACGAACTCGGGGCTGCTGGTATGGCCGGACGTCTCGGAGAATCGCTGATTCCAAAAGGTGACCCGATGGAGGCTAGACTGCAGGAAATGCTCCGTTACAATATGGACAAGTACGCCTCGCAGAATCTTGACACTCTTCATATAGCGAGGAGAGTCAGAGAGCTTTTGTCGATACACAATATTGGACAGAGACTCTTCGCCAAGTACGTACTCGGACTTAGCCAAGGGACCGTAAGCGAACTTCTTAGCAAGCCAAAGCCATGGGACAAGCTGACTGAGAAGGGGAGAGACAGCTACAGAAAGATGCACGGCTGGGCTTGCGACGACAACGCCGTTATGCTGCTCAAATCTCTGATCCCCAAAAAAGAGTGTGTTGCAGGCAAGGAGCAGGGGATGCCGACATTTGCCCGAGGACCCCAAGACGGTGGTCCTCAGGATATGAGCGACGAACGTTTGGCCCATATGCTGTCAGAGTCCGGACACCTGCAGATGCGTAGCGAGCACGACACCTCGAATGATGCCGACAGCAAGAGTCCGCATCGAGTCGGGTGCCCTAGCCCCTTCAGCAAGGAAAGAATGGATAGTCTAAACAGGAGAGTTAAGAAGTACGAAAACGACGACATTCCTCAAGAGAAAGTTGTGAGGATCTACCAAGAGGAACTCGCCAAGCTTATGGGACGCAGAGTCGATGATCTTCGCGGACCCAGAGACTTCCCTCCGAGCGCGATGTTTCCTCCCTTTTTCAGCGGCGCCCAGGGTATGCAAGGGATGGATCGTACGCAGGAGGACATCCGCCTAGCCCTCGATGCGTATCACCGTGAATTACAAAAATTGAACTCTGGTCCGGGGCAGAATCCTGCCTTAGCTGGACTCCCCGGTCTACCAGGACTTCCGAGTCTTCTAGCTCTACAGCAACAGGCTCTTCAGCAACATCACCTCGCTACCAATGGGGGCGTAGTACAAGACCTCAGCCTCGTCAAAGTAGACCCAAGGAATAAAATGATGAACGGTGTATCGGATGAAGAAAAGGAGAAGATGGAGGAGGCGATGAGACATGCAGGAAGTGCTTTCTCCTTGGTACGACCCAAGCAGGAACAACCCATCGGCCCACAGTCTACCCCGGGTGGTTCAAGCGCCAGTTCACCTCTAGGTAACTCGATTTTACCGCCAGCTATGACGCCGAACGAAGACTTTCCTGGTGCCGCGGCAGCCAGTCCTCTACAAAGAATGGCGTCCATCACCAATAGCTTAATAAGCCAACCGTCCACTCCCACACACCATTCGCCGAATCAAAGACCATTGAAAGCGGTTTTGCCTCCGATAACACAGCAGCAATTCGACATGTACAACAATTTGAATACCGAAGATATCGTCAAAAGGGTGAAGGAGCAGCTCTCCCAGTACTCGATCTCTCAGCGTCTATTCGGAGAATCTGTCTTGGGCCTTTCCCAAGGCTCGGTATCGGACCTATTGGCCAGACCAAAGCCATGGCATATGCTGACGCAAAAAGGTCGCGAGCCTTTCATCAGAATGAAGATGTTCCTTGAGGATGACAACGCGGTACATAAACTCGTCGCGAGTCAGTACAAGATCGCGCCGGAGAAGCTCATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCCTGCGGAACCCCAATGAAACCAATGCCACCAACGAAACTAGTTCAAGAACAACTCCAAAATGCTGCAAAGGCCCAGGCTGCTGCACAAGCCGCGGCTCAAGCGGCGGCACAACACCAACAGGAGACTCAAATGCAGCTTGGACCACCTCAACCGAGTCCGCAGCATCCGCAGCATCCACAACACCCACAACACCCACAACCACCACCACCGATGATTTTAACTCCTCCCGGCCCTCATCATCCTCACGCTCAACTTAGCATGCAGGAACTTCAGAAGAAGCAACAACAGATGAGCCTTCACTCGCCTCATCATCAAATGGCTCCTTCTCCGCTGCGTGGACTTCACCCTCACATTTCACCAAGTGTTTATGAGATGGCTGCGCTAACTCAGGACCTTGATACCCAAACGATAACGACAAAAATCAAGGAGGCTTTGTTGGCGAACAATATTGGACAGAAGATATTTGGCGAAGCGGTACTTGGTCTGTCTCAAGGTTCGGTTAGCGAATTATTGAGCAAACCTAAGCCGTGGCATATGCTCAGTATCAAGGGACGCGAACCGTTCATAAGAATGCAGTTGTGGCTCTCAGACGCCCACAATGTAGATCGACTTCAAGCCCTGAAGAACGAACGACGAGAGGCAAATAAAAGACGAAGAAATAGCGGACCCGGTCATGACAATAGCTCCGACACATCGAGCAACGACACTGCCGAGTTTTATCACGCCGCATCTCCAGGCCCTGGTCCTGCATCGGCGAAAAAACAACGTGTTTTATTTTCCGAGGAGCAGAAGGAGGCTCTCCGACTCGCCTTCACCCTTGACCCATACCCGAACGTTGCTACGATAGAGTTCCTAGCCGGTGAACTCGCCCTTTCCTCACGAACGATAACAAACTGGTTCCACAACCACAGGATGCGGCTTAAGCAGCAGTCACCACACGGTCCACAGGAAGCACAGTCACCCAGGGAACCTGGCCAGCCTTTTGACCCTGTGCAATTCAGACTTCTCCTCAACCAAAGATTACTTGAAATACAGAAGGAAAGGCTGGGACTCGGCAACGTCCCGATTCCTTACCCGCCCTACTTCAACACGAACCTTGTTGCCCTCGTCGGTAGTGCCCTCAAGGAGCAATGCTCGGGTCTTGACCTTTCCATGGGCGCCTTGAAGAGGGAACCCAACCAAGAGTTCGAGGACGACGACGGTGATGACGCGATGAGTAATCTTGGTAGCGAGGATTCAGACGGTTCCGGTGGTAGCATAAAACGTGAACCAACGGAGACTCCAGCCCCAGCAATGGTTCGATCAAATAGAAGAAAGCCGGCAGCACCACAGTGGGTAAACCCGGAATGGCAAGAACCAGCCAGAGCTGGTGACGAGGTGATAATAAACGGAGTATGTGTCATGCAAACGGACGATTATGGGGTTAAAAGGGAAGCGGAGGAAACTGTACGCGTAGAACCCACCCCCGTTCAAGACAGATACGAAGAGGACGCGGCGAGTGATTCTTCATCAGCATCAGGTACGGGACAAGGATTACAGGACCGAGATAGTCCCATGCCTAGTCCTAAGTCTGGTCAACATAGTCCGATAACTTCCCCAAGACCACCTTCAGAACAGATCAGTATGCAACAGCAGTCAATGCATCAGGATGAGAATATTAAGGATGTTGTTAAAAACGAACCAGACGAATCCTGGGACTATTAG
Protein Sequence
MRLEQISQLGEEVTRLQQSIQRLQETSAQATARLEEELELRRQHINRLEARLERQRDYDDLKREISVLRSVDFSQIPTGEPGKSLEHLLIERTKALQQTESLKPPTTPDALGGLASPLQRAATSSPHGGNALPSASQPPPPPPPPPPLPAPTRSTPTPSSATSSSSLLFHPPLQNVETFGSFLGEEIVANWRRSLERSIMSQQHPQVSQSQPQLLHGPSLNHLPSPTDSTNTAPAKSNTPLGSGLDASEKAPTPIPGLEIPAPPTPSSTAGLTSPPSLQPPPVVIEQQQQQQQQQPPPPSMNGIPPKSPVEESCHNNNNSHHLTNNNIGGGLSVLDTLKSPFRFDDHRAHFRFADELGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDDNAVMLLKSLIPKKECVAGKEQGMPTFARGPQDGGPQDMSDERLAHMLSESGHLQMRSEHDTSNDADSKSPHRVGCPSPFSKERMDSLNRRVKKYENDDIPQEKVVRIYQEELAKLMGRRVDDLRGPRDFPPSAMFPPFFSGAQGMQGMDRTQEDIRLALDAYHRELQKLNSGPGQNPALAGLPGLPGLPSLLALQQQALQQHHLATNGGVVQDLSLVKVDPRNKMMNGVSDEEKEKMEEAMRHAGSAFSLVRPKQEQPIGPQSTPGGSSASSPLGNSILPPAMTPNEDFPGAAAASPLQRMASITNSLISQPSTPTHHSPNQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQHQQETQMQLGPPQPSPQHPQHPQHPQHPQPPPPMILTPPGPHHPHAQLSMQELQKKQQQMSLHSPHHQMAPSPLRGLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRNSGPGHDNSSDTSSNDTAEFYHAASPGPGPASAKKQRVLFSEEQKEALRLAFTLDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQSPHGPQEAQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPIPYPPYFNTNLVALVGSALKEQCSGLDLSMGALKREPNQEFEDDDGDDAMSNLGSEDSDGSGGSIKREPTETPAPAMVRSNRRKPAAPQWVNPEWQEPARAGDEVIINGVCVMQTDDYGVKREAEETVRVEPTPVQDRYEEDAASDSSSASGTGQGLQDRDSPMPSPKSGQHSPITSPRPPSEQISMQQQSMHQDENIKDVVKNEPDESWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01394913;
90% Identity
iTF_01200041;
80% Identity
iTF_01413001;