Basic Information

Gene Symbol
Arid2
Assembly
GCA_943736035.1
Location
CALSEY010000019.1:2218265-2250676[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.5e-24 4.5e-20 73.2 0.0 1 89 15 101 15 101 0.95

Sequence Information

Coding Sequence
ATGGCCAAATTCCTCAACAAGGACCCTGTCACCTATCAGCGGGAGCGGGACGGGTTCATCAAAGGACTACATCATTTTCACGAGACTCGCGGAACGCCTTTCCGAAGGCCACCTAAAATCAGCGGAAACGAGATAGACTTGTACCTGCTCTACGTACTGGTTACCGCCCATGGAGGATGGATCAAGGTGAACACTAGGAACGAATGGACGTCCCTCTGCGAACAATTTCATTTGCCCACCGAGTGTGTCAACAGCGGTGTTGGCCTCAAACAAATATACCTCAGGTATCTTGACAGGTATGAAAAGGTTCATTTCCTCGGCGAAGATGGACAGCAAGCTGACGACGAGGACGAGGATTCAAGACACCGGAAATGGTCAGCAAGAGCACTTCACTCTGTACCATTGACGtataatcatcatcagcacaatgttgccgAATCTCTGAGGGACTACAACGGTCTTTCTTCGGACTTATACAAACCTTCGAACTACGACAAATTAGCGCTTTCGCTTCTTTCTCCATTGCCTAACGAGCAAGATTTTGCGATAAATGTTTGTACATTGTTATCAAACGAGGGTAAACACTCGCTTCGTCTTGACAAATATCCTCGGCTTGTTAACATACTGTTAGCACACGCTGGTGTATTCGATTCACCCGGTACTCGGCAGCTTTTTATTGAAGTATATTCTAGGGTCAGAAATTATTCAATTAATACATTTTGGTCCGATGTTATCGATTCTCAAGACGCTATTGAACTAACCGACGAAAGAGAGTTTATAAAAAAAGTTATCACAACACCGAATACATTTTCTAGAAGAAAAATTCTCGAAAGAGAAAAGAATAGCAAAATTTTGCTACAAAGTTCAGGAAACGAGGAAAATGTTACACCCATGGAAATTGAGGAGGTAACGGTAACGACGGAATGCTTGCGGCTGGATACCGCGCAGACTGCATCAACAGATAATAAAGATGATAGCGATATATTTCGCGATAAAAATCAGAATACAATAAGATTTGACGATGAGGACAAAGACTTGTTTTGCGTCGGTAGAACATTAGGGACGCAGGATCCATACGGGCAACGGGTACTTCAGATAGCATCAATTCTAAGGAATTTAAGTTTCACACCCGAAAACGTATTGATTTTAGGGAGAAATCGATGTTTCCTAAGATTCGTATTATTATGCGTTAGTGCGAGATGGAGCAATCTGCATCAACTAGGCTTCGACATGTTAGGCAATGTTGCTAATGAAATATTACTCAAAGAAGCTGGTCAAAGGATAACTAACGTTATGCTATCTTCTGTATCTAAAGGCATTGACTCACCCGACAGATTTATCGTCATATCATGTCTCGAAGTTCTTAATAAAATTAGCCAACAAGATAGCAACGAGGAAATTGTTACTCTAGGACTAGACGATACTGCCTACGAAATAATATGCAGGTTTCTTGCCCTAAGTGACATCGCGTTACTTGTCTATACATTAGAGTGTCTATACGCTCTAACATCCCTGGGTGAACGACCTTGTACAAGTGTAGCGCGAGTACGCGGAGCTATAGATACTTTAGTTGCCCTTGTCACAGTAGAGGCACAGAGTTACGGACCAAAAGCTTGCATATTGATGAGAGTCGTGGAGACTGTATCAACTATTGCTATTCCAACAACAGCAGGTGGACAAAGTAATCCTTCGATTCCTGTTGCACCTGTACAGGTCGTTACATCTTCGGTACCAACTATTCCAACTACAATTACTGCCACAACAGCTCCTGTTAGTCCAGCACCATCAAGGCCTACTACTCCAGCTAGTGTTGTCAGCAAACAAGCATCTAAAGCGATAGAAGCCTCGAATACGATACAACAGCAACATGCTCATCAACAAATTATTCAAGAGAATGAACAGTTTGCCCTTAGCTGGCTTAAGGCTACTTTCGAACATTCAACTGGGATTAAAATTGAACAGGAAGAACTTTACAAAAAGTATCTTGGGTGCTGTACTAAGATTGGAAGACGAGGTGTTATCGCACCGCTTCATTTTCCCAGATGTGTTAGATCTGTTTTTGGCGGCACCGTCGGACCTAATCCTATGAAAGGAGAATCGACGGGAACGCAGTACTACGAAGGCATCAGAGTTCGCGCAATGCCAATGACGGTGTCTTATTCAAGCCAAACGTTAACTGCAAGTAATATGATTCATCCGATACCGGCGATCAACACAACTCCAGTAAAGGTGCTTCCCACACAACAGCGAACACTCAAGACCATAAGTCCTGCTCCCGATAGCACAGCCCTAGAAAATTCCATAACTGGTGCACAGAGAACCCCGGCCCCCGCGTCCCCTATTCTCAAAGCGCAGTTGTCTGCCCCGCCAAAACCACCCTCTACGATCCCAAATCAACCCCAGAATCCAGTCACCAAGGTTGACTCCAAAAGTCAGGTGTCAGTGTCGCACCCCCACCTGAGTCAAGCCCTGCTGGCCAGTGGTTCCCAATCTCAACAACAGCAGCAATCCCAAGTACAAGTAACTACGAAGGAAGATCCTCGATGCGGCGCAACATCAAGTTCAATAATAAAAAGCCTACTGGCTACAAAGGTAACGATCAGCGGCGACTGCATGCCCAGCGCCGCTGCCAGTTGTGTGTCTGCCCCTTCTGCCTGCGTAATAAACACTACCGCTAGCATCGCATCCAGCATCAGTGCCAACCAGCTAATAACCAGCAACCAGGTTGCTCAACGTCAACAACAACAAAGGCTACTGCAGGCTCAATTAACCGGAGTTATTCAGCCAGCAGCACCTGCTGCTATCCCGGCAGTAGCTTCACCTAAAATCCAAATAAACACAAAGCAAAAACCTGTGATTGCTGTTACACCTGCTAAGAAGTTCCAGAGGATCAACGGAGCTAAGGTCATCATCCCCAATAATTGCGACAAGACTGAAGTAAACGACATGGAGAATGTCAACCAGATGGTAACGTCCACGACAGTGATTTCGAATCCAACAGAAAACCACATATCTTCTACCGTCAAAGTCTGCCGGCCACCTCCTCTGGTTCCTCTAAGTACAGGGAATAAGACAAATCATCGAACGATTTGTACACCTTTAGCAGAAGACTCGGATTCTACTAATAATTCACTTGCATCTAGCAGCGGAATTGGGGGGAGTAGAGATTATTCGGGTGTTGGAGCTGAAGAAGAGAATTCATTGACTAGTTTTGAGGGAATTCTTTTGAACGGAGCACCTAGTAACTTGGATATCGACGCCCACGATGATGGATCATCAAAAGATTCTTCGAGTATAAGCTCCAAAGATAAACCACTTCAGAGCATGATGCTCGCTGATTTATTGGAGAGAAAAGTAGACAAAGAACCGATAATGAATGGCGTTATGGGTAAGAATTCAATAAACGATAAGGGAATGGACCTTGTAGAAAATCACATTGAAAAAGTATTGAAAGAATCTCCAACGGACATTAAAATAAAATCTGAATTAGACGAGAACAATGTAATGCAGACAGAAGGCTCTGAAGAAACTCTAATCGAAGCTCCTAGAGGTATAAAACGTTCTGCAAATGAGCTTGACGAAGTTGAGTCTAAAAAACCTAAGTATTCAAACGGCACGCGGTCACCGGATCCCGGGGTTGATTCTACGACAGCAGAATCAACAGTCTCGAGTTTGAAATCTGAGGAACAAGACGACGACAAAGATAGCGACAAGGCAACTGTCTCTTCAACAGCAGCAAACCTTTATGCAGCTTTAGCCGCAGACTGTATTGAAGACGAAACCGATCTGGATGACCAAACGGCAATGGTCAAAGAAGAACCCGTACTGAAAGAGGAGCCCCAAATATTTTTAAACCAAGTTGAAACCCAACAACAACAACCGCAGCACCAGCACCAGTTGCAACAACACCATCATCATCATCACCAACATCATCAACAACAACTGATTGTTTCTGCGCCTCGACAAATAGTCGTTCAGCAAGCAATACAGTCGAATAATCAGGTCATCATTCCGACTTCAAACGTGAAAGGAAGACAGCCTCAACAACCGCAAGTCCTGCTGCAACAAGGCGTTGGAGGTCAGCTACAGTACGTAGTTTCCAGCGGCGTACCTGGACAAAATTATGTTCTCGCACAATCGCAGACTGCTTTAGTTCAGGGACAGGCACAAACGGTTCTAGTGGCTCAGACAACGCAGCAACAAGGAACCGGAGCTAAAACTATAATTATTCTGCAACCTCAGTCCGCGGCGCAACCTAGTACGCAGAAAATGGTCGCAGTCACACCTCAAGGGCAACAAGTCGTCGTTACACAAGTTCCAAGACCCATTTTGCAGAGCTCTGCTCTAAGCAATATACCTCCGCCTTTGGTACCGACCTCTGCGACAATCCCACAAGCTTCCATTATCGTTAATAGCTCAGTTGCACAGGCAAATACTAACGCAGTTACAGTCACCATTCCGGCAATGTCTCAGCAAGGATCTCTCACCGCCAGTGTACCCTCAAGAGTCGTTACTCCAACGCCTGCTTCTACTCCTCCACCGACTAGGCCGACAACTCCACATCAAGCAGCCGCTACGCATGGATTGGCTGCTAAACAACCTCTGAAAATAATTAAGACTACTAGTTCCTCAACTTCGACTGAAACAGATTCTAGACCGTCGACTAGTCAACAGCAGCCTGAGACCAAGACTATTACCATTAAAATTGATCCTAATGCTTTTTTGTGCGAATGGCGAGGCTGTTTAAGGCAATTCAAAACGGCGCATGAAGTTTACCTTCACGTATGCGAAGCGCATTGTCCTGTTGGAGGTGAAGAGATTTTATGCTTATGGGCAAGTTGCGACGGACTTAAAAGGCGCAGATTTTCTCTTATGACTCATCTCTACGATAGACACTGTAATTCGGAGACCATGGCACAAAGAAGAAAACAGCTGACCGTTACTGGTAAAACTGAAATTTCAACATCCACACCTGCTACACCACACCATCCTGGATATGCGCCGAACGCCGCATTCCATGCGATAAAAAGGCACGCATTGGAATTTGTCAATCCGAAGGAGTTGATGCAGCAGAGGCCGTGCAAGCCCGCTGCAGCCACTTCGAGCACTTCTTCTCCCAGACCAGGGCAAAATCCTCCACCGGAACAGGATGACAACGAAGGCCCAGTGACCAAAAGTATTCGCCTGACGGCAGCTCTGATTCTCAGAAACCTAGTCATTTACTCCGCACATGGAAGAAGGCATCTCAGGGCGTACGAACCTCATCTAGCAGGAGTTGCACTAAGCAACGTTGAATCATCGAGAACAATAGCACAGGTGTTGTACGACATGAATGACCAGAGTAGCAGCAGTCACAGGTGA
Protein Sequence
MAKFLNKDPVTYQRERDGFIKGLHHFHETRGTPFRRPPKISGNEIDLYLLYVLVTAHGGWIKVNTRNEWTSLCEQFHLPTECVNSGVGLKQIYLRYLDRYEKVHFLGEDGQQADDEDEDSRHRKWSARALHSVPLTYNHHQHNVAESLRDYNGLSSDLYKPSNYDKLALSLLSPLPNEQDFAINVCTLLSNEGKHSLRLDKYPRLVNILLAHAGVFDSPGTRQLFIEVYSRVRNYSINTFWSDVIDSQDAIELTDEREFIKKVITTPNTFSRRKILEREKNSKILLQSSGNEENVTPMEIEEVTVTTECLRLDTAQTASTDNKDDSDIFRDKNQNTIRFDDEDKDLFCVGRTLGTQDPYGQRVLQIASILRNLSFTPENVLILGRNRCFLRFVLLCVSARWSNLHQLGFDMLGNVANEILLKEAGQRITNVMLSSVSKGIDSPDRFIVISCLEVLNKISQQDSNEEIVTLGLDDTAYEIICRFLALSDIALLVYTLECLYALTSLGERPCTSVARVRGAIDTLVALVTVEAQSYGPKACILMRVVETVSTIAIPTTAGGQSNPSIPVAPVQVVTSSVPTIPTTITATTAPVSPAPSRPTTPASVVSKQASKAIEASNTIQQQHAHQQIIQENEQFALSWLKATFEHSTGIKIEQEELYKKYLGCCTKIGRRGVIAPLHFPRCVRSVFGGTVGPNPMKGESTGTQYYEGIRVRAMPMTVSYSSQTLTASNMIHPIPAINTTPVKVLPTQQRTLKTISPAPDSTALENSITGAQRTPAPASPILKAQLSAPPKPPSTIPNQPQNPVTKVDSKSQVSVSHPHLSQALLASGSQSQQQQQSQVQVTTKEDPRCGATSSSIIKSLLATKVTISGDCMPSAAASCVSAPSACVINTTASIASSISANQLITSNQVAQRQQQQRLLQAQLTGVIQPAAPAAIPAVASPKIQINTKQKPVIAVTPAKKFQRINGAKVIIPNNCDKTEVNDMENVNQMVTSTTVISNPTENHISSTVKVCRPPPLVPLSTGNKTNHRTICTPLAEDSDSTNNSLASSSGIGGSRDYSGVGAEEENSLTSFEGILLNGAPSNLDIDAHDDGSSKDSSSISSKDKPLQSMMLADLLERKVDKEPIMNGVMGKNSINDKGMDLVENHIEKVLKESPTDIKIKSELDENNVMQTEGSEETLIEAPRGIKRSANELDEVESKKPKYSNGTRSPDPGVDSTTAESTVSSLKSEEQDDDKDSDKATVSSTAANLYAALAADCIEDETDLDDQTAMVKEEPVLKEEPQIFLNQVETQQQQPQHQHQLQQHHHHHHQHHQQQLIVSAPRQIVVQQAIQSNNQVIIPTSNVKGRQPQQPQVLLQQGVGGQLQYVVSSGVPGQNYVLAQSQTALVQGQAQTVLVAQTTQQQGTGAKTIIILQPQSAAQPSTQKMVAVTPQGQQVVVTQVPRPILQSSALSNIPPPLVPTSATIPQASIIVNSSVAQANTNAVTVTIPAMSQQGSLTASVPSRVVTPTPASTPPPTRPTTPHQAAATHGLAAKQPLKIIKTTSSSTSTETDSRPSTSQQQPETKTITIKIDPNAFLCEWRGCLRQFKTAHEVYLHVCEAHCPVGGEEILCLWASCDGLKRRRFSLMTHLYDRHCNSETMAQRRKQLTVTGKTEISTSTPATPHHPGYAPNAAFHAIKRHALEFVNPKELMQQRPCKPAAATSSTSSPRPGQNPPPEQDDNEGPVTKSIRLTAALILRNLVIYSAHGRRHLRAYEPHLAGVALSNVESSRTIAQVLYDMNDQSSSSHR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2