Tdis009585.1
Basic Information
- Insect
- Tenthredo distinguenda
- Gene Symbol
- -
- Assembly
- GCA_947538915.1
- Location
- OX384530.1:18312577-18319257[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 33 1.2 1.7e+02 3.8 1.5 3 23 109 130 107 130 0.86 2 33 0.00014 0.02 16.1 5.2 1 23 136 159 136 159 0.96 3 33 0.0016 0.22 12.8 1.7 1 23 252 274 252 274 0.98 4 33 1.9e-06 0.00026 22.0 2.0 1 23 280 303 280 303 0.96 5 33 1.1 1.4e+02 4.0 4.1 1 23 310 333 310 333 0.94 6 33 0.0049 0.67 11.3 1.6 1 23 339 361 339 361 0.95 7 33 0.065 9 7.8 2.1 2 23 367 389 366 389 0.89 8 33 0.0011 0.15 13.4 2.7 1 23 396 418 396 418 0.98 9 33 9.1e-07 0.00012 23.0 0.8 1 23 422 444 422 444 0.98 10 33 0.8 1.1e+02 4.3 1.6 3 23 452 472 450 472 0.73 11 33 3.3e-05 0.0045 18.1 0.8 1 23 478 501 478 501 0.97 12 33 0.0013 0.18 13.1 1.6 1 23 638 661 638 661 0.97 13 33 0.00046 0.063 14.5 3.5 1 23 667 689 667 689 0.98 14 33 0.0022 0.3 12.4 5.6 1 23 698 721 698 721 0.96 15 33 0.0042 0.58 11.5 1.8 1 23 727 749 727 749 0.92 16 33 5.3e-05 0.0073 17.5 2.3 1 23 754 777 754 777 0.96 17 33 0.0025 0.34 12.2 0.6 1 23 783 805 783 805 0.98 18 33 1.1e-05 0.0014 19.7 1.5 1 23 809 831 809 831 0.99 19 33 0.0012 0.16 13.2 4.1 1 23 837 859 837 859 0.99 20 33 0.00015 0.02 16.1 2.3 1 23 865 887 865 887 0.97 21 33 0.0011 0.15 13.3 1.1 1 23 1017 1039 1017 1039 0.96 22 33 0.04 5.4 8.4 2.4 1 20 1108 1127 1108 1130 0.94 23 33 0.02 2.8 9.4 2.0 1 23 1139 1162 1139 1162 0.95 24 33 0.021 2.9 9.3 0.7 1 23 1175 1197 1175 1197 0.96 25 33 1 1.4e+02 4.0 3.6 2 23 1208 1230 1207 1230 0.94 26 33 0.018 2.5 9.5 3.1 1 23 1267 1290 1267 1290 0.97 27 33 0.033 4.5 8.7 2.0 1 23 1307 1330 1307 1330 0.95 28 33 3.7e-06 0.00051 21.1 1.3 1 23 1336 1359 1336 1359 0.96 29 33 0.037 5.1 8.5 0.8 3 23 1366 1387 1364 1387 0.94 30 33 0.00048 0.066 14.5 0.4 1 23 1392 1415 1392 1415 0.97 31 33 5.3e-08 7.3e-06 26.9 0.4 2 23 1422 1443 1421 1443 0.97 32 33 1.4e-07 1.9e-05 25.6 0.4 1 23 1449 1471 1449 1471 0.98 33 33 4.8e-07 6.6e-05 23.9 0.3 1 23 1477 1499 1477 1499 0.98
Sequence Information
- Coding Sequence
- ATGTCGACGTCAAACAGCTTCTCAAAATTCTCAAGACAGAGATTTCAAAGACACATAAAGTACCGGGCTACTTCTTACTCTGTCCCAGATTCTCTAATATTTCATCTGCAACAGTTGGACGAATATGGAGAAAAGAGTTTAAAAGTTCAACTGCGGAATAGCGAGAAGACCGAGAGGACGGTGGTGAGAAAAGGAGCTTTGTGCCATAGACTGTTGAAAGGAGAATCTGGGAAAAAAGATCGAGGAATGAACGAGGTGACTAAAAAATATCAGACGTATGGAAAAGCGAGATCCTTGAAGCGTAAAAATAAGGAAAAAGTCTGCTGCGACATATGCAAAGTCAGTTTCAACGTCAAAGGATCAGAGTACAATAAACACATGCTGAAGCACAGCAATTTGTACGCATTTCAGTGCGACGTTTGTTCGAAAAAGTTCAAACACAAAAACAACATGAAAAGACATAAGATCAAAGTACACGGGGAAGCTCCTGTCTACAGGTCAGACGGCAGCGCTCAACAACCCGAAGAAAATCTCTCCAAGGCGAGCCGTGCTTTGAATAAGTTGAGGAAGCCGAAGATAAGGACGAAAAGGCAATTTGAAAGAACATCTAGAGCCAGCCAATCATCTCAAGAATCTTCTCCCGATTCAGAGAATTGTGAAAACGGAGATACGCTGTTATCCAGAAAGAGAGCTGGTCCCAGCGACGAAGATGATCCTTTGAGAACTGACGAGGACACGAAACGGAGGAAAGATTACACTTGTCATGTTTGTGATGTTTCTTTCAAGCTGGGAGGATTGTACAAGAAACACATGGTCAAACACAGCGATCTGCGAGCGTTTAAATGCAAAGTGTGCGGTAAACAGTTCAAGTATAATTCTGGCTTGAAAAAACATGCCAGAGAACAGCATGACGAATCCGCGCCGCTGTATTCTTGCAGAATATGCGAATTTTCTACAAAACATTACCCCTAcctgcaggaacatttcacccgcaagcacacagacgattataaatacaaatgcaccttttgtaagaaacaattcaaggtagaaacagactataaggtccacgtagccgaccatgaggctggcttgtgtgtctgtgatgtctgcggattgacctatccgaacaagagctcgctttacttccacagaaactacaaacacacgaataagacaaagtccttcgagtgcaaggtctgcaaaaagaaacttcagaacgaaaagaatctagaaattcatatgcagcatcacgacgagacttatatgtgcgaggaatgcggtatgaagtttgccagaaaatatggcctcactaaacaccgtcgcatacacaccagagagaagtcccacttatgtccggtatgtggcaaagccttcgcctgcatggctactcaaagagtgcatttcctaactcacgccggcgttagaccttacatctgcaacgtatgtggctctaaattcacccagagatcttcgctaatgatacactggaagaaacaACATCCCGAAGCCAGCGAACCTCCCCCACCGGTTACCCTGACCAACATACTTGAGACTATAAAGAAATCACGTAACCATTTAAATAAGGACATCGGGAGCAAGGAAGTGAACGGTAGATATCTGAGGCTCAAATCAAACTGTGAATACCTCGATTCTCGCGGCTCCACCCTGCCGGTCGTGAGAAAGTTGGAATCTAATAAAATATTGCAAAAGTTACCTCCGAGGATTGTCCGGAAATTAAAAGAGAAAAGAAGCTGTAAACCCCTTTTGGCAACAGACAAACTCAAAGTCAAGGATCTTCCAACAGCTGAAAGAATTGCCTCTGAACCCGAGAGGACAAGCCTTCAATCATCCCTGGAGGAGGAAATCAAGCCTAAAGGCGTTCTCTACAAGAAGTTAACGGACGGAAATTACACCTGCGATATATGCAACTCAAAGTTTGAACAAAAGAGTAAAATAATGCGCCACATAACTAGCAAGCACAGTTTTCACAGGCCTTTcaaatgcgctacttgctcaaaggcttttaagtacaaatgcgatctgaaagcccacaagctggttcacgaagctatagactctagcatgctgcaccgctgcgacaaatgcgactaccgaaccaaaacgaagaacaatttgaagtcacattacatcaggaagcatacggacgattataaattctcatgcgagcactgtggcaagagattcaagatggaatgggacctgaaatttcatgtcggtacccacggcagctctcaacacatgtgcgatatatgcggacgattttacaccagcagttactccctctacaagcatagaaaggtcgcgcatctcaacgaatacaagtaccaatgcagcgtctgtaacaagaggcttctcactcaggagaatctcgacaatcacatgctgcagcacaaccagacttacacctgcaaagaatgcgccaaagtatttgcctctaagagatatctctctactcatatgaccactcacaccggagtaaaaccctatacctgccaggtctgcgaaaagaacttccgaacctcacacatgagaaatacgcatctgcttacacattccgccgaacgtccacatatttgtgatctttgtggccaggctttcaagagaagatactacatgatcgaacacagaaggaaacatcctgactctcaccTATCTTCTCCACCTGTCCTTTTAGGCAGGAATAGAAATAACGCGGGAAATAGCTGTGCCGGTCTTAGAATAACAAGAACCGATTCCGCTGGCCGGTTCATCGTGGGCAAGAATTCAGTGCCTATGGAACTGTGGCAGAGATCAAACCCAAAGGGAAGACCCTCGTATTCTCTGGTGCCTGTTGTCGGACGGAGCTTAACCAACAGAAGGACTTCTAAGGACGAATTGATACCGGCCAACGAAATCAAGGTCGAAATCAACGAGGAAATAGCTGGTGTAAGATGCTCGGTGGAAACTATCCCAGAATCCACTCCCTGTGAGGAGAGCAGATACCAAGAGTCACTTGCCCACTTATGCCAAGTTATGGTGGAATTTCACCCGTGCGATAAATGCGGGATGAAATTCCCTGTCGAGAATATGCTCAAGAGACACAAAATTAGACACATGCGGAAGTACAGTGGTTGCGACTTTAAATTTGGGAAGAAAGATCGTCGTAATTCTCTTAACATATGGAGGCATAGGGTAGAGGAGAAAAATGTCCTTTATCTTTGCAGTTTCTGCGATTTTAAATGCCACAAAAGAACTAAATTAACATCTCACGTTAGCAGAAGACACAAGAGACGGAAGACCGCGGATCGTTCGAAACTGTACCGCTGCGGTAGTTGTGACTACAAGTGTGTAAAGAAGGAGAATTTTAATGCCCACATATGGAGGCACAAGGATGATCGAAGGGAGTCTAACTTTCCCTGTAAGATGTGCGATTTCAAGTCAAAAAAACGGAGCACGTTAGCGTCTCATGTTACAAGGAAACACAAGCTTTACAAGAAAGGAGAAAAGGAGAAGGAGGAATATCGCTGCGACTCATGTGATTACAAGTCCTTTGAGAAGGAGAAGCTCCAGGCCCATGTTAGAGGGCATAAGGAGAATCCGGAGAAAGGTGTATCCCTGTCCTGTACCTCCTGCGATTTTAAATGCAAGAAGCGTGGAACGCTAGCCTCCCACGTAACAAGGAAGCACAAAGTGGCCGGGGAGTGCAGCTGCAACGTCTGCGACTTCAAATGTTTTAAGATGAGCACAATGTACTCTCACAAGCGAACGCACAAGGCGGAGAGCGAGGGCAAGGTCTACAATTGTAACGAGTGTAACTTCAAAACGATAAAAAAGACTTCCCTTTACTCTCACATCAAGAGGAAGCACAAGGTTCAAGCCAAGGGTGGTTCTGGCCTCGAGCAAGTCACGGAATACTTTTACTgcaatcagtgcgactacaagaacaaaaataagtacgaactgaaggtacacgtcgccaggaaacacactgacgattttaaattctcctgtgagacatgcggcaagaaattcaaggtcaaaggcgacctcactaatcatataaggttcaatcacaaagagggacctgtgatttgcgacgtatgcggcaaaacttgcctaaacagcaactctctttacgttcatcaaaagtttgcccattataaggctaaatacgaatgcagaatttgcaagaggcgacttgtaacccaggagaacttggacgagcacatgctacgacagcacgaaaaacgtgagaacgttgtgtgcgaggaatgcggaaaaacattctcccgcaacagccgtctcaaagttcacatgagaattcacacaggggataaaccttacacttgtaacatttgcggcaagtcttttgccagacgaactgccctgaaacaacaccttctgatacacacaggcatgagaccctatgtgtgcgatatttgcggtaaatcatttacgcagaagcctgggctcatcagccatcggaaatcacatcctggatcccatccccctctGCCTAGGGTTCTCATTGATCATATACTCAACGATGTCATGAACAACTGA
- Protein Sequence
- MSTSNSFSKFSRQRFQRHIKYRATSYSVPDSLIFHLQQLDEYGEKSLKVQLRNSEKTERTVVRKGALCHRLLKGESGKKDRGMNEVTKKYQTYGKARSLKRKNKEKVCCDICKVSFNVKGSEYNKHMLKHSNLYAFQCDVCSKKFKHKNNMKRHKIKVHGEAPVYRSDGSAQQPEENLSKASRALNKLRKPKIRTKRQFERTSRASQSSQESSPDSENCENGDTLLSRKRAGPSDEDDPLRTDEDTKRRKDYTCHVCDVSFKLGGLYKKHMVKHSDLRAFKCKVCGKQFKYNSGLKKHAREQHDESAPLYSCRICEFSTKHYPYLQEHFTRKHTDDYKYKCTFCKKQFKVETDYKVHVADHEAGLCVCDVCGLTYPNKSSLYFHRNYKHTNKTKSFECKVCKKKLQNEKNLEIHMQHHDETYMCEECGMKFARKYGLTKHRRIHTREKSHLCPVCGKAFACMATQRVHFLTHAGVRPYICNVCGSKFTQRSSLMIHWKKQHPEASEPPPPVTLTNILETIKKSRNHLNKDIGSKEVNGRYLRLKSNCEYLDSRGSTLPVVRKLESNKILQKLPPRIVRKLKEKRSCKPLLATDKLKVKDLPTAERIASEPERTSLQSSLEEEIKPKGVLYKKLTDGNYTCDICNSKFEQKSKIMRHITSKHSFHRPFKCATCSKAFKYKCDLKAHKLVHEAIDSSMLHRCDKCDYRTKTKNNLKSHYIRKHTDDYKFSCEHCGKRFKMEWDLKFHVGTHGSSQHMCDICGRFYTSSYSLYKHRKVAHLNEYKYQCSVCNKRLLTQENLDNHMLQHNQTYTCKECAKVFASKRYLSTHMTTHTGVKPYTCQVCEKNFRTSHMRNTHLLTHSAERPHICDLCGQAFKRRYYMIEHRRKHPDSHLSSPPVLLGRNRNNAGNSCAGLRITRTDSAGRFIVGKNSVPMELWQRSNPKGRPSYSLVPVVGRSLTNRRTSKDELIPANEIKVEINEEIAGVRCSVETIPESTPCEESRYQESLAHLCQVMVEFHPCDKCGMKFPVENMLKRHKIRHMRKYSGCDFKFGKKDRRNSLNIWRHRVEEKNVLYLCSFCDFKCHKRTKLTSHVSRRHKRRKTADRSKLYRCGSCDYKCVKKENFNAHIWRHKDDRRESNFPCKMCDFKSKKRSTLASHVTRKHKLYKKGEKEKEEYRCDSCDYKSFEKEKLQAHVRGHKENPEKGVSLSCTSCDFKCKKRGTLASHVTRKHKVAGECSCNVCDFKCFKMSTMYSHKRTHKAESEGKVYNCNECNFKTIKKTSLYSHIKRKHKVQAKGGSGLEQVTEYFYCNQCDYKNKNKYELKVHVARKHTDDFKFSCETCGKKFKVKGDLTNHIRFNHKEGPVICDVCGKTCLNSNSLYVHQKFAHYKAKYECRICKRRLVTQENLDEHMLRQHEKRENVVCEECGKTFSRNSRLKVHMRIHTGDKPYTCNICGKSFARRTALKQHLLIHTGMRPYVCDICGKSFTQKPGLISHRKSHPGSHPPLPRVLIDHILNDVMNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -