Tdis027038.1
Basic Information
- Insect
- Tenthredo distinguenda
- Gene Symbol
- -
- Assembly
- GCA_947538915.1
- Location
- OX384533.1:6558762-6560631[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.8e-07 0.00021 21.7 0.0 5 44 18 57 16 58 0.90 2 3 7.6 8.9e+03 -2.7 0.0 22 30 89 97 86 97 0.77 3 3 5.5 6.4e+03 -2.2 0.0 5 12 222 229 221 231 0.86
Sequence Information
- Coding Sequence
- ATGCCACGAAGTACAACGGGAAATAAGCGACCACCGATAAACATAAATAATCTAAGAAACGCAATAAGAAGTGTTCTACAAGATGGGTTTTCTGTGTCCAAATCAGGAAAAGTACACAACATTTCGAAAACGACATTACTTCGTCACTTAGCAGTACATCGTAGCAAAAAAAATAACATGTTTGAATACGAATGTAAGCTGGCTCATaaaaaaatatttacaagcgaagaagaagaactattagtcgagtatcttcaaaaagctgctgctatgcactatggactatcaaagaaagatacgaagattttggcttatcagtttgctaaagcgaatggaaagcgggtacctaataactgggatgagaacaaaatagcagggcaagaatggatgcgcggttttctgcaccgtcacccaaccttatcactcagaaagtcagaggcaacaagtctagctagggcgactagttttaacaaagttgacgtcgcaaaatttttcgataatttagagagttgtatgctacgcaataatttcggtccggatagaatttataatctcgatgaaactgctaatacaactgtccacgtaccaccaaaaatattagcaactaaaggcataaaacaagttggtagtgttacatctggagaacgtggtgtcaacgttactatgatcgctgccatcaacgctattggaaatcaagtaccgccaatgccgatatttccaataaaaatttttaaggatcacatgttaaaaggagctccaccaggatgtataggagctgcgaacccatccggctggtctaatgaagaaacatttACCTTGCAAATTAAATATGAGGGGTGTTTTTCGACCTTTGTAACAATAttattgacattaccccctcatacttcacataaaacacaaccactggacagaacggtatttggtccatataaaatattttatcatcaagctgccagtgacaggatgacgtgtaatccaggaaaacctatagcaatttatgatatcgcggaaataattggaaactcgtatccaagagcgttcacgccgcacaatattgttaaaggctttcaagtcacaggaatctggccacttaacaaaaacatctttagcgaggatgaatatttatctgctttcgtgatggaccgATTGGCCCCAGAAGAATCCACTGAAGAAGTGGTGGCTGTTTCTCCCGGAATTGTCCAGACCGATAAAGTGGTACCGTCAAACAGTACAAATACTGGTGCGTGCGTTACTCCGGATAATGTACGACCACTTCCGAAGGCAGCTCCAAGGAAGACATCTTCTCGAGGAAAAAGACGAAGGGGAAAATCCCAAATCCTAACACATAGTCCAGAAAAAAATGAAGTTGAACAACAAAAATCAAAGAAAACCGTAAGCAAAAATCCATCTAAGCCAATGAGAAAAAAAATATGCGTCGACTCAACAGATGCACAAGACAAACCAAACGCAAGATCCAAGATGCACACGAATAGAATAAGTTGA
- Protein Sequence
- MPRSTTGNKRPPININNLRNAIRSVLQDGFSVSKSGKVHNISKTTLLRHLAVHRSKKNNMFEYECKLAHKKIFTSEEEELLVEYLQKAAAMHYGLSKKDTKILAYQFAKANGKRVPNNWDENKIAGQEWMRGFLHRHPTLSLRKSEATSLARATSFNKVDVAKFFDNLESCMLRNNFGPDRIYNLDETANTTVHVPPKILATKGIKQVGSVTSGERGVNVTMIAAINAIGNQVPPMPIFPIKIFKDHMLKGAPPGCIGAANPSGWSNEETFTLQIKYEGCFSTFVTILLTLPPHTSHKTQPLDRTVFGPYKIFYHQAASDRMTCNPGKPIAIYDIAEIIGNSYPRAFTPHNIVKGFQVTGIWPLNKNIFSEDEYLSAFVMDRLAPEESTEEVVAVSPGIVQTDKVVPSNSTNTGACVTPDNVRPLPKAAPRKTSSRGKRRRGKSQILTHSPEKNEVEQQKSKKTVSKNPSKPMRKKICVDSTDAQDKPNARSKMHTNRIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -