Tdis017787.1
Basic Information
- Insect
- Tenthredo distinguenda
- Gene Symbol
- -
- Assembly
- GCA_947538915.1
- Location
- OX384537.1:4187179-4187994[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-09 2.1e-06 28.1 0.0 7 40 8 41 7 46 0.90 2 2 4.5 5.3e+03 -2.0 0.0 33 42 110 119 110 120 0.88
Sequence Information
- Coding Sequence
- ATGGACGACAGAAAATATGGACGTGCCATCGCAGCTGTCCGCAATGGCGACTGTTCCGAAAAACATGCTGCTATGATGTACGGTGTACCAAGACAAACCATGAGGCGATATTTGAAAAATGATAAAACTGCAAAGCTAGGACTGGGGCGGCCATGTGCATTCGGAGTAGAAGCTGAAATGGAGCTCGTAAATTACATAAAAGACCTGTCTAAACATGGATTCTCACTAACTAGGCTGCAAGTAAGATCATTGGCATTCGACTTCGCTGAAAAGCTTCAAATACCGAACAGGTTTAATAAAAATACAAGATTAGCCGGATGGGATTGGCTGTGGGCGTTTATCCGGCGACACCCAGATTTATTTATTGGGAAAGAAGAAAACCTCTCCGTTAATCGTGCTCTATCCATGATGAAAGAAGTGGTTGGTGGATTTATAAATTTACTGGAAGAAAATATTTCATCCTTGAATCTATTGGGTAAACCGGAAAGAATATTCAATATGGATGAAAGTGGCTTCCAACTTAATACCAAACCAGCAAGTGTTATTACTCAAAAAGGTCAAAAAGTAATGCACAGAATCGCACCGAAAGAAAGAGGAGAAACTATTACATTAGTTGCTTCCTTCAATGCTGCTGGAAATTATCTTCCACCAGTGTTGATAATCAAAGGGAAGAGAACCATAATCGGGCTGAAGGAACAGCTTCCACTTGGGGCTGAAGTCTATATGAACCAACAATCTGCTTATATTAATGGTGGTAGCACAAAGGACTCGGTACTCGATAACCATCATATAGACGTGATAAATCTAAAAGTTTAG
- Protein Sequence
- MDDRKYGRAIAAVRNGDCSEKHAAMMYGVPRQTMRRYLKNDKTAKLGLGRPCAFGVEAEMELVNYIKDLSKHGFSLTRLQVRSLAFDFAEKLQIPNRFNKNTRLAGWDWLWAFIRRHPDLFIGKEENLSVNRALSMMKEVVGGFINLLEENISSLNLLGKPERIFNMDESGFQLNTKPASVITQKGQKVMHRIAPKERGETITLVASFNAAGNYLPPVLIIKGKRTIIGLKEQLPLGAEVYMNQQSAYINGGSTKDSVLDNHHIDVINLKV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -