Tdis006362.1
Basic Information
- Insect
- Tenthredo distinguenda
- Gene Symbol
- -
- Assembly
- GCA_947538915.1
- Location
- OX384532.1:17789302-17792593[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-10 1.3e-07 32.0 0.0 1 38 20 57 20 62 0.95 2 2 6.8 7.9e+03 -2.5 0.0 16 22 137 143 134 143 0.80
Sequence Information
- Coding Sequence
- ATGCCCCGAAAATATACTAGGAGAAACACTGAAGCCGCTGCCAAACGAGGGCAGTGGACTGAAGAGAATCTGCGGGAGGCTATAATAAGGATAGATGCTGGAGAAATAGGTGTCAATGAGGCATCAAAATACTACGGCATACCCTCGCGAACTTTACGTCGTCGAAAAAGTTCCGGCATTCTCGAAAAACTTCCACTAGGGCCACAAGGAACACTAGGTACGGAGAACGAAAGCCGTTTGGTAAGGCATATACAACGACTTGAATCTTGTGGATTTGCACCAGATAGACAGACTGTTCGACGTCTTGCCTATCAATTTGCTGAGAAACTTGGCATCCGTCACAAATTTAATAAAGAAACGCAGTGTGCAGGGCGCGATTGCCTAGTTTCTTTTTTGGAAAGAAACAGAGAATTGAGTATCAGACAAGCCGAGGGTTTGTCTGTAGCACGTGGTCAGGGCATGTCTAGAGATGAAGTGAACGGATTTTTCGACTTGCTGTTTCAAATTTACACTCAATATGATTTCTTGCATAAGCCTGGGAGCATATACAATATGGACGAATCTGGCCTACAATTGAATCCCACGGaaaaacatcgtagatgtaaagaaagccgccaagtacctacacagaaatcacaattgccttataagcagaacgtttcgccaggctctgtcgttgaatcaagaaaaaagccaagtatcgaacgtacccctgcgatctctcagcaagtctacgtcgtgaaggcgagtttcgtGTTTCGCGATACCCTGGAAGGCGGAAATATCTGCATGTGGACCGGTGGACCAGGCCGGTATGAGACAGATGGAAAGGGGAGCGGGATATTCTTGGAGATGGGAAGATCTTTGTGCAGCGCGCTTCCAGGCGTATCTCAGGATATGATGAGCTTGGCCGCCCCGGCTACTGACTCTGAGGCTTCCAGGTGA
- Protein Sequence
- MPRKYTRRNTEAAAKRGQWTEENLREAIIRIDAGEIGVNEASKYYGIPSRTLRRRKSSGILEKLPLGPQGTLGTENESRLVRHIQRLESCGFAPDRQTVRRLAYQFAEKLGIRHKFNKETQCAGRDCLVSFLERNRELSIRQAEGLSVARGQGMSRDEVNGFFDLLFQIYTQYDFLHKPGSIYNMDESGLQLNPTEKHRRCKESRQVPTQKSQLPYKQNVSPGSVVESRKKPSIERTPAISQQVYVVKASFVFRDTLEGGNICMWTGGPGRYETDGKGSGIFLEMGRSLCSALPGVSQDMMSLAAPATDSEASR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -