Tdis003220.1
Basic Information
- Insect
- Tenthredo distinguenda
- Gene Symbol
- TIGD1
- Assembly
- GCA_947538915.1
- Location
- OX384538.1:6879206-6881236[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3e-11 3.6e-08 33.8 0.0 1 38 20 57 20 62 0.95
Sequence Information
- Coding Sequence
- ATGCCCCGAAAGTATACTAAGAGAAACACTGAAGCCGCTGCTAAGCGGGGGCAGTGGACTGAAGAGAATCTGCGGGAGGCCATAAAAAGGATAGATGCTGGAGAAATAGGTGTCAATGAGGCATCAAAATACTACGGCATACCCTCGCGAACTTTACGTCGTCGAAAAAGTTCCGGCATTCTCGAAAAACTTCCACTAGGGCCACAAGGAACTCTGGGTACGGAGAACGAACGCCGTTTGGTAAGGCATATACAACGACTTGAATCCTGTGGATTTGCACCAGATAGACAAACTGTTCGACGTCTTGCCTATCAATTTGCTGAGAAACTTGGCATCCGTCACAAATTTAATAAAGAAACGCAGTGTGCAGGGCGCGATTGGCTAGTTTCTTTTCTGGAAAGAAACAGAGAATTGAGTATCAGACAAGCCGAGGGTTTGTCTGTAGCACGTGGTCAGGGCATGTCTAGAGATGAAGTGAACGGATTTTTCGACTTGCTGTTTCAAATCTACACTCAatatgatttcttccataagcctgggagcatatacaatatggacgaatctggcctacaattgaataacaagccaggaaaagtacttgcaaataaaggtgctaaagatgttcacgtagtaacatcggctgaaagaggagaaaatgtcaccgtaattgcatgctgtaatgcggaaggtactttccttcctccagtaataattatgaagggcaagcggcagaaaccggaattctccgatggactacctccaggatcccaagtttatatgaatcagaaatcttcatacattaattcggaactttttttcacttggttgaaagatcattttttgccaagaaaagtcccaggaaaggttcttctgatactggatggacacatatcccactccaatgcattagatatgcttgagttcgcggacgccaacgatatactccttctgtgcttgcctagccacaCTACTCAAGCCTTACAGCCCTTAGACAGAGCTTTTTTTAAGCCACTGAAAGACTATTTCAAACAAGCAACCGCAAATTGGATGCTGCATCATCAGGACAGAAGAATAACTAGACTGCAAGCAGGATCACTTATTGGAACAGCTTGGATGAAAGCAACCTCTGTTCAGACAGGAAGTTCTGGGTTTCGAGCAACGGGAATCCATCCGTTTGATAGAACAGCGATACCTGATCACTTTTTCGCAATTTCTGATGTTTCTAAACGCATTGATGATCTTCATGAACACAATTGCGAACCGATTTCAGCAATGAAAGAAAGTGGATTAGAAGCGGAACCTACTGCAGGACCATCCAACATTTGTAGTCCCGTATCTGGACTGAAAGCAGTCCTCTCGACTGTCCCTGAAACCCAAGAACAACAAGAAACACCGACAAAACATTTGGTCGAAATCCGCCCGATACCAAAAATCCCCCTGCCGTTAAATAAAAGACGCAAACAGTCCGCGGCACTCCTCACGACGTCGACTGCAATAGATGTAAAACGAATGAAAATTGAGGAAAAAGAGAACAATAACACCGGAAATAAGATCGTCAAAGGCAAAAAAGGATTGAAAATAAAAACACAGGCAGCAACAATGAAGAAAACAAAACAAAAATTGCTTGTGGATGAAAGCGATGTTGATGCAGAATCGTCAGAACCCTCAAGTGACTGTACCAAGACAAAAAAAATAAACACAAAGCCCGTGAAAAAAGGAGCCAAAGTTGCCATAAATAGAGCTCCAAAGCGAGATAAAATAGCGAAAAGTAAGGCAATAAAAAATAAGAAGAAAATGCCACTAGACGAAAGCGATTCTGAAGAAAAATCGTCTGATTCTCTGAATAATTCTTACGAGGATTGCTGTATTGAATGTCTGGTAAATTACTGCGATACAAAGGAAAAGGTAGACTGGTTGCAGTGCATTGACTGTGAAAACTGGATGCACGAAAACTGTACCATGTACTGTGATAGGTGCAATAAGTGTGGAAAGAAAGAAAAACGTGCTCAAAAAAGCGGAACACGTAAATAA
- Protein Sequence
- MPRKYTKRNTEAAAKRGQWTEENLREAIKRIDAGEIGVNEASKYYGIPSRTLRRRKSSGILEKLPLGPQGTLGTENERRLVRHIQRLESCGFAPDRQTVRRLAYQFAEKLGIRHKFNKETQCAGRDWLVSFLERNRELSIRQAEGLSVARGQGMSRDEVNGFFDLLFQIYTQYDFFHKPGSIYNMDESGLQLNNKPGKVLANKGAKDVHVVTSAERGENVTVIACCNAEGTFLPPVIIMKGKRQKPEFSDGLPPGSQVYMNQKSSYINSELFFTWLKDHFLPRKVPGKVLLILDGHISHSNALDMLEFADANDILLLCLPSHTTQALQPLDRAFFKPLKDYFKQATANWMLHHQDRRITRLQAGSLIGTAWMKATSVQTGSSGFRATGIHPFDRTAIPDHFFAISDVSKRIDDLHEHNCEPISAMKESGLEAEPTAGPSNICSPVSGLKAVLSTVPETQEQQETPTKHLVEIRPIPKIPLPLNKRRKQSAALLTTSTAIDVKRMKIEEKENNNTGNKIVKGKKGLKIKTQAATMKKTKQKLLVDESDVDAESSEPSSDCTKTKKINTKPVKKGAKVAINRAPKRDKIAKSKAIKNKKKMPLDESDSEEKSSDSLNNSYEDCCIECLVNYCDTKEKVDWLQCIDCENWMHENCTMYCDRCNKCGKKEKRAQKSGTRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00718482;
- 90% Identity
- -
- 80% Identity
- -