Tdis006232.1
Basic Information
- Insect
- Tenthredo distinguenda
- Gene Symbol
- -
- Assembly
- GCA_947538915.1
- Location
- OX384532.1:17317816-17318421[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-12 1.2e-09 38.5 0.0 2 41 12 51 11 54 0.93 2 2 9.3 1.1e+04 -3.0 0.0 24 36 174 187 174 193 0.65
Sequence Information
- Coding Sequence
- ATGGCCGAGAAAAGAAAATATCGGTTGTGGTCAGAAAATGATATGGCGCGAGCAATTTCGGCGTGTAAAAATGGAGACTTCGGGCTCAATGAGGCGTCTAGAAGATATGATATCCCGAAACCAACGTTGAAGCGTCATCTGGATGAGAAAAATGCATTTGCAAACAACGACTCCAAGTTTGCTGGTCGACCACCGATTTTCTCTGATGATATCGAGAATGAACTAGTAGAACACATTTTACATATGAATACAAAAATGTTTGGATCGACGATAATGGAAGTAAGAAAATCGGCGTTTCAAATTGCTGAAAGTAATAACATACCGCATACGTTCAATCAGTCAAAAAGGATGACTGGAAAAGACTGGTACTACAAATTCATGGCTCGACATCCGAATTTGAGTTTTAGACAGCCTGAGAACACGTCAATGACTCGGGCCAAGGGTTTTAACAAACAGAACGTTAATGAATATTTAGATATTCTGGAAAATATATGTGATGAACATACTCTCGATGGCACAAGAATTTTCAACGTCGCCGAATCGGGGTTTTCAACTGTGCGAAAAGAGGCGAAAAGGTCGTCGCCCGAAAAGGATGTAAACAAGTAG
- Protein Sequence
- MAEKRKYRLWSENDMARAISACKNGDFGLNEASRRYDIPKPTLKRHLDEKNAFANNDSKFAGRPPIFSDDIENELVEHILHMNTKMFGSTIMEVRKSAFQIAESNNIPHTFNQSKRMTGKDWYYKFMARHPNLSFRQPENTSMTRAKGFNKQNVNEYLDILENICDEHTLDGTRIFNVAESGFSTVRKEAKRSSPEKDVNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -