Tamo010850.2
Basic Information
- Insect
- Tenthredo amoena
- Gene Symbol
- -
- Assembly
- GCA_963966615.1
- Location
- OZ016486.1:6522124-6530310[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.0012 0.13 13.3 2.0 2 23 1135 1156 1134 1156 0.97 2 14 3.5e-05 0.0038 18.2 0.8 2 23 1194 1216 1193 1216 0.96 3 14 0.16 17 6.7 1.7 2 23 1236 1257 1235 1257 0.96 4 14 1.6 1.7e+02 3.5 4.8 3 21 1351 1369 1349 1370 0.92 5 14 0.00013 0.014 16.4 0.6 1 21 1485 1505 1485 1506 0.96 6 14 0.00077 0.081 14.0 0.1 3 23 1532 1552 1530 1552 0.95 7 14 0.0068 0.72 11.0 0.4 2 23 1575 1596 1574 1596 0.96 8 14 2.1 2.2e+02 3.2 0.3 1 23 1603 1625 1603 1625 0.89 9 14 0.013 1.3 10.1 0.6 1 23 1697 1719 1697 1719 0.97 10 14 0.00073 0.078 14.0 1.2 1 23 1786 1809 1786 1809 0.97 11 14 1.5 1.6e+02 3.6 3.7 1 23 2388 2412 2388 2412 0.93 12 14 0.00034 0.036 15.1 4.1 2 23 2434 2456 2433 2456 0.92 13 14 0.29 31 5.8 0.1 1 23 2474 2497 2474 2497 0.96 14 14 0.0043 0.46 11.6 0.2 1 23 2514 2536 2514 2536 0.99
Sequence Information
- Coding Sequence
- ATGGAATCATCAAGACGCAAGAATGTTAGTCGGAAAGGTAAAACTCGCAAGAACTTGGAAGTAAAAAGTAATTGCGGCAGCCTAAGCGCATTGAACCCTCATGGAAACTTACATTCTTTTCTAAGCAACAGAATTATTGAGGATGAAGATGTGTCCGATAAAGATAGCTGTTATTCTCTCTATAATACCGAAAGTAAAATATTTGATGCTGATTCGAATTTAAACTCCGATTCTGGTGCAACGAGTAATTCAATTTTGACAAGGCAATGCGATGATGAGAATAGTAGTAAATGTGATGGCAATATAGATATGACGTTGTGTAAACCATGTTCTGTGATACTAGAACGTTTGTCTGATGAAGTAGTCCAGAATTTATTGCCGAGGAATAATTTCGGagtaaagaatgaaaagaagagtGATCAGAGAAGTCGGAATTCTGGGTCACTAAAATTCCACCGTGTTCTTAGAAGAAATAATACAagattttggaattttgaaagGACAAAAGAGGTTTCTGATTCAAAGATCAGAAAGAATCGCAATGAAGTTGAAAGCAGTAGTAGTTCAGATAAAACCATTAAATCTGATTGTGAATCTAATGGCAGCTGctcgaatgaaataattattagacCTCATCTTGCATTAGATGAGGATAAAAATAACTCGGAGAATTCTAACTCTAATGAAGTTTATAGCAAAGAGCCTTGTACTACAACTTCACATATTGAACATCTGAACAAACAGGAAAGCAGTGTGATTAGTCCAGAGAATTCGGAGAGTAAATTATCGCTGCCAAAACGTTTCAGCCTTTCgcggaagaagaaaaaaatagctaATAACAAAGAAGATGACGATTGTAGGCAAGATGCTGGCACTGAAATTTTGCCAAGTGATAATTTGAAGGAACTCAAAGACACTGGGATTAATTCTGAGTCTTTTCGAAATACAGTATCATCTCCAAGACGGCTAAGAAGCGTATCTAAGGAGAATATTGCCACTACCAAAGAGCTTGAATCTTATAGGCAAGAtcatcgtaaaaaaattttgcgaagTGGAAACCCAAATGAAATTGAAGGCAGTAGGATTAGCTCGGACAATTCTCAGCCTATAAGATTACCGCAAAAACATTTCAATCTCTCACTCAGACGGAAAAAAActaattccaaaaataatgaagtttCTAGACAAGATCCTCCCAGCATAATCCCAGAGCCAGAAGATTATGATGAAATTATTGCGAGTAGTGAATCGGACGTAAAACACCTCAAGATTTCTATAAAGAGAAAGACAGTTGATACTGAAGATGCTGGATCACCTGTTCCGAAGCTCAACAAATTCGACGACGAACAGGCTGTGACAAATCCCGATGGCAGCAAAGTAGAAGAACTTGGTCCGCTTCATCATGAATCCAGCGCATCCAGACATCCGCATCAACAGGACACACTGCAAGACCCACAAGTACTGGGTAATAGAAGTTGCAAACAAAGGTCTTCCGCTGATCTCGCGAATGACCACATCAACGAGCCTTCCCATGATACATTACAAACTCAGACAGTTCAGATAACGATGAATTTATCACCTAAACATCACAAATCTCCACAAGTCAAAGACCATTCGCCAACTAAAAGTTCGAACGATCCAATAAATGTTGAACAATCTTTCATCGATTTCCCAAATCTGTTGTCGGTCAGTGATTCTGTGGGCGAGCTCTCTCCTCATTCATTACATACTCACACGGTTTTCATAGTAAACAGTTCACCTGTTGAAGGTGACAATCCCCCCCatgtcaaaaaatattcgccaaTTAAAAGTTCGCGAGATCCAATGAATGATGAACAATCGTCCAATGATCTCCCAAATTTGTTGTCGGTCCGTGATAATGTGGACGAACTTTCTCGTGATTCATTACACCCTCCCATAGCAAAGAATTTATCAATCACAGGTCTTAGGTCCCCGCAAGTAGTAAGTAATTCACCAGCTAAAAATACACACGATTCACTAAATCAGAATTTATTTGCGAATACCGGACCAAGGCTTAGGtcaagaaaagagagagaatcaTTGGAAAGCACGAAACGTTTGAAAGACTCTTCTATTATGGATATTGGAAATTTGAATGTCGATCAGAAACTTCCTGGCAAAGATACAAATCTCAAAAAATCCTCTGAGCTAACTCCTAAGTCGCAATCCGTATCCACGAATGACAATAAACTTCGCAAACATTCTTTGGACTCTCGGACTAGCAACAGTCCAAAATCATCTAAGACGTTGAGTCCATTGACGAGGAAAGTAGTTATTTCACCGGAAAAACATACCGTCTTGATCAACCCACCGTCAGAATCAAACGTATCTCAAATGCAGACAAACGACATGAGTAGCAAATCACCTGAAACTAACAAAGTACAAGAACAAAGTGACGCCATACCACGTACGGATAATTCGGAAGAATTGCGTGACGGTAACGAGCTACAAAAAAAGCCAAATGACGAGTCAGTTCTGGACAAGGATTCAAATGTTGCTGCCATACATCAGACAGATAGACATCCAGTTCTTGTATCTGTAATACAATCTCCAATAACAGCGGGAACTCCGAGAAGTCATGTGAAAAAACAGTTACCAagatatcttcctgaaaatAGCATGACAATTTTAAGCCGTGAgatgatagaagaaaaaagctttTGGATAGGATTGGATAATGCCATGGACGACGTTAACAAAGCCACCACAACTGCAGCGGCAAAAGACGATACCGTGCAAAGAAATGAGGCCTCCGAAAATATTCCTCTTGATAATACGGCTAAAGCTACAACTAGAAGATCGTCAACTACCACAAAGAACGTAGAGAATAActattctgaaaatataaatccTGTTAATATCGTGGTAAATGagggagataaaaatttgagagCAGAATCTCGAGACAGCAATacgtttttaacaaaattactCACATCTGAAAGCGCAAAGAGTCTTTCCCCAAAACGCTCTGCTGGcaggaaaattgaaagtaGCTTAGACGAAGAAAACGCATTGACTGTGAGTAAAATGGTACAGAAAAAGCTTGAAGTTGTAGAAGAGCACAGTGATTCAGtttcagaagaagaaaagcttAGGCTGAATATTCCAAGTTCGACACCAATACAACCTGCTGAAGATTCTAGTAGACCGATTACAGTTGAGTGTGATGATCAAGGTACTGAAAAGTCAAACTCTCAAGATGAGTTTGCGGCTGATTCGCAGCAAAATGGTCAGTTGCTTATAGACACAGATGAAAGCGAGTCGGATCCCAGACCGGTAGAAGATGTAATGCCAGGTACATCATCTCCAAGCAGTTCTAATGGCGGAAAAGTTCTACGGGATGGAGAAaccgataaaaataaaggagaatCAAGGGTAAAATGCGTCATCTGCAAGAAGACGTATAGACACACTAGAGGATTAGAGCAACACTTGAAGGTACATGTAAAGCAAACAGATGGTTGTTGCCTTATTTGTGATAAGCCGTTAGATAAAAAACACGCGATTGAACATTATCTTGAACATTGCGGGTGCTCCGAAGATGCTCATACTTTGCCATGTGGAATCTGTAAGATGAAATTCAGCAAACAATCTAGCCTTATAAATCATATGAAGTCAAAACACAATGTTGGAAAAAATCGCGCTAGGGCGAAATTGAATTCGATAAATATGAACCATAACAAATGTGATGTTTGTCAATTGACTTGCGACACCGAAGAAGACTTGTTCTCGCATGTGTTCAAGCACACGGAACAAGAATTGCAAGATGCTTTCAAAGCTGCAATGGCTAAAAGAGCACAAGGGCAGTCAGATAGCGCTACCGTTTGTCAAAATCAAGGTAAAGACGGTCCTGAGAAAGAAAAGACTCAAGATAAAGAACAGCTTCCATCAGAAGTGCCAAAGGCTACTAATACCTCACCGAAATTACTTCCGGCTGTTCCGAATATTGATATATCGATTTGTATATGTCACAAAGATGAGAGATTAGAAATATCTGGAGGCGTGATAATTGAAATTGCACTAGCCTGCTTCCAGTGCAAAACCTTTTTCAAGTCGAAGAAATGCTTCAAAGATCATTACAATAGCACCTCGTGCAAATGGGGAGATGACACTCCAGCCATACCTAAAATGTTTTGCAATAAATGTTGCGTGATTCTAAATAATCTGGAAGAGATGCACAGTCATTTGGCAAAGCATGGCGGGGGTCATATTGACATGAAAATATCGGTACTCTGCAAACATTGCAATATATTCTTCTTCAGCATCGGGTCTTCGTTTTATGCCCACTGGACTAATCACCGAAACAACCCCCTATTTATAGCTGACCATTATTCGTTTCCGAAAAAAATGCAAGTAAAGATCATAGAACCCGGAGGTACGGAGTCTGCTCACGAAGATGAACCCACGGAAAGTCTCTTCGTAGCAGATTATCAGTgccaaaaatgtgaaaaaccgTTTCAAACTGCAAACGACCTTAAAAAACACCTCAATTCACCGAATTCATGcactaaaaaaattgaatctgcATCGAAAATCACTGAGAATTTGAAATCGGGTTTCAATATAATTTGCAGCATATGTAACAAAGAATTTGTGGATAAGTCGACGTTTGATGTTCACATCGAGGAGCACGATACCATCAAAGGTTTTCTTCAAAGACCGCAAGAATCGGACGAATCATTAAGAAATAATCCACTAACTTGCAGTATTTGTAAAACTGAATACGACACGGTATCAAATTACCAAGAACATTTGATTAGACACCAAGTTATTCAAGAGAAATTTGTTTGCAATTATTGCAATCTGATGATGGATAGTGTAGAAGACTTTGAACGACATTCTACAGAACATAAAGGCACACCAGAAAAACCAGTCGCATGTAAAGTTATATTTGCTACAGCTAAGTTTCACTGCAAACCTTGTAAAATATGGTTCGATAGCCAATCCATTTTGGATGAGCACGTCACGTCTCACCCGGCAACGAACGACACTTTGCATTTATCGAGTTCAAAATCACTAGAAAACGGTACAGCTACAATCGCGCCGGCTATCGAGAAGAAAAGTCACGTTTGTGCGACGTGCCAAAAACAGTTCGACGACCAAATCAAACTAGATGCTCACGTTTCTACACACGACAAAGATTCCTCGGAGAAATCGATCGCAGATCCTACCGTGATTCACCTGTCTGATGATTCGAATTCTGCTGATATTGAAATCATTGGAATCGCGAGTAGTGAGGAAAACGAAGAGCCTACTGTAAAAAATACTTTGGTTCAAGAGACTAAAAAACCACCGTTCCTAcgtgttaaaaatttgaaagaattacTACCCTACGCTTGTAGCAAGTGCAAAGCGGAGTTCGACACGCAAGTAAATCTCAGCAAACATGTTTGTACCCCACATGTCAAACCCACACAAGATAAAGGGTTTAGTTACTCTTGTACAATCTGTAAAGACTATAAATGCGACAATGATGCCGATTGGAATCTACACGTATTATCACACTTTCCACTTAGCTGTTCTCAAAAGTTTAGCGAGGCTTGGTATGTTATGATGAAGTTGCGATCTGGGCAGCAGGTTTTTAAGTGCAACATTTGTCCAAGCTTCGATTCCTTGACGGTCCACACGATGCGGCAACATTTTCTAATCAATCATCGAGATATTTATAATCCAATCTTCAAATGCAGAGTTTGTCGTACTTTCAAAACTGAAATGGAACAAGAAATTCGACGACACGAAGCTGCTCATTTTCAGCATCAATCTCCACTTCAACAGTTAACTGCATTGAGCAATCAATTATCAACAGCTGAACCAATTGAATTGCCCAAGAACCTCCAGCAACCACTTTCGATACCACCGCTGATCATGACAGGCAATAATACATCTACAAATAAACcagaaaaattcaacgattcTCAACAATTGGATAATCCAAATAACTTTTCACGACCAGGCCCAAATCCGTCCGTAATAAAATCAAGTAATAATGTAACCTCAGTTCAATCACTGCCTATTTTTACCAATTCCCAAAAACAGGCCCCGACACTTCAACCGGATAATAACTCtaacaattttcaacaatCTGATTCAAATTTACCCGCAACTAGCTCAGGCAACAATTTACCTTCGCTTCGACCGCAACAAAATGTCAAAAACTTTATGCAACCGGGCTCGATGCATAAACAAGATAATAATTCCAACAATTTTCAGCAAGCAATTTTAATTCCAACTACGACTACTACTAACTTGGGTAACAATTTTCCAACACTTCAACTAGTCGATAATCCCAACAAGCAATTTATACGGCCAATTACGTTCCCAGTCGTAACTAACTTGATTCAACCGCTGCAAAATTTTGACAACTCTCAACAACGGGACCCAACGCGTCAATCAGATAATAATTCcaacaattttcaacaatCAATTTCACTACCATCTGTGAGTGATTCAAATAGTAAACTTCCCACACTTCAATCAGCTGACAGTTCCACCACCGTTCGACATACACTCTGGATTCCACCAGTAACTAGTTCAAGCAATAATTTACCCTCCCTTCAGCCAGCGCAAATTTCCAACAACCAGTCGGTTTCAACACTTCCACCAAATGATAATTGCAACAATTTTCGACAGTCAATTTCAATTCCGTCTGTTACCATCTCAGGCAGTAATTTATCGTCAATTCAACAAGTCGATATATCGAACAAATTCCAACCGTCAGCATCAACTCCGGTCGTTACTAGCTCAGGGAATAATTTACCCACTCTACAACCTCTGCATAGTTTCAACAATTCCCAACAACCGGGCTCGACCCTTCAACcatataataattcgaataattttcaacaatcCATTTCAATTCCACCTGTGACCAGCTCGAGTAGCAGTTTATCGTCGTTTCAATCAATGAACAATTCGCAATGGTCAACGGCGACCGcgcaaacttttcaaattcaaatcaacAACGGTACACCGTTTAACAATATGACTAATGTGATGCACACAGTACCCTTGTATGTAACGAATGTGACATACTGTTGTCgcatttgtaaaatttttaaatgctTTTCCGAAGAAGAATTAAAGGCACACGAATCTCTGCACGAGTTCGCTCAATCGACTCAACCTTCGAAGAGATTATTTCGCTGCAAAGTATgcacaaatattttttgccCTACCGAAGATCACTTGAAAATGCACATGGAAATGTATCACAAAGCTGAGAAATCAAACGTATCTCAAAATCAGACGCAGTCTAATGGTACCGATAATCAACTCAAATGCAAGCATTGCCACCAGAGTTTTGCATCTTCAGCTCAATTGACGCGACACGTATATAACAGTCACACACTTCTCGACCAACGAATAAACGATACTCAATTCCGAAACTCATATCCTTATACGTGTGAATTATGCTCGATTGGTTTTTTGAACGAGGCTTTCTTGCAAGCTCATGTACGTCAGATACATCCTGGCGTTAAATTAGCACGTCAGAAGGTAGCCGATACCAATACCTTGTATCAATGTGATACTTGTGGCTTACTCCTTATATCTGAAGCAACGTTGAATTATCACATGAGGTCTCACAATATTATGGGATTAcagtaa
- Protein Sequence
- MESSRRKNVSRKGKTRKNLEVKSNCGSLSALNPHGNLHSFLSNRIIEDEDVSDKDSCYSLYNTESKIFDADSNLNSDSGATSNSILTRQCDDENSSKCDGNIDMTLCKPCSVILERLSDEVVQNLLPRNNFGVKNEKKSDQRSRNSGSLKFHRVLRRNNTRFWNFERTKEVSDSKIRKNRNEVESSSSSDKTIKSDCESNGSCSNEIIIRPHLALDEDKNNSENSNSNEVYSKEPCTTTSHIEHLNKQESSVISPENSESKLSLPKRFSLSRKKKKIANNKEDDDCRQDAGTEILPSDNLKELKDTGINSESFRNTVSSPRRLRSVSKENIATTKELESYRQDHRKKILRSGNPNEIEGSRISSDNSQPIRLPQKHFNLSLRRKKTNSKNNEVSRQDPPSIIPEPEDYDEIIASSESDVKHLKISIKRKTVDTEDAGSPVPKLNKFDDEQAVTNPDGSKVEELGPLHHESSASRHPHQQDTLQDPQVLGNRSCKQRSSADLANDHINEPSHDTLQTQTVQITMNLSPKHHKSPQVKDHSPTKSSNDPINVEQSFIDFPNLLSVSDSVGELSPHSLHTHTVFIVNSSPVEGDNPPHVKKYSPIKSSRDPMNDEQSSNDLPNLLSVRDNVDELSRDSLHPPIAKNLSITGLRSPQVVSNSPAKNTHDSLNQNLFANTGPRLRSRKERESLESTKRLKDSSIMDIGNLNVDQKLPGKDTNLKKSSELTPKSQSVSTNDNKLRKHSLDSRTSNSPKSSKTLSPLTRKVVISPEKHTVLINPPSESNVSQMQTNDMSSKSPETNKVQEQSDAIPRTDNSEELRDGNELQKKPNDESVLDKDSNVAAIHQTDRHPVLVSVIQSPITAGTPRSHVKKQLPRYLPENSMTILSREMIEEKSFWIGLDNAMDDVNKATTTAAAKDDTVQRNEASENIPLDNTAKATTRRSSTTTKNVENNYSENINPVNIVVNEGDKNLRAESRDSNTFLTKLLTSESAKSLSPKRSAGRKIESSLDEENALTVSKMVQKKLEVVEEHSDSVSEEEKLRLNIPSSTPIQPAEDSSRPITVECDDQGTEKSNSQDEFAADSQQNGQLLIDTDESESDPRPVEDVMPGTSSPSSSNGGKVLRDGETDKNKGESRVKCVICKKTYRHTRGLEQHLKVHVKQTDGCCLICDKPLDKKHAIEHYLEHCGCSEDAHTLPCGICKMKFSKQSSLINHMKSKHNVGKNRARAKLNSINMNHNKCDVCQLTCDTEEDLFSHVFKHTEQELQDAFKAAMAKRAQGQSDSATVCQNQGKDGPEKEKTQDKEQLPSEVPKATNTSPKLLPAVPNIDISICICHKDERLEISGGVIIEIALACFQCKTFFKSKKCFKDHYNSTSCKWGDDTPAIPKMFCNKCCVILNNLEEMHSHLAKHGGGHIDMKISVLCKHCNIFFFSIGSSFYAHWTNHRNNPLFIADHYSFPKKMQVKIIEPGGTESAHEDEPTESLFVADYQCQKCEKPFQTANDLKKHLNSPNSCTKKIESASKITENLKSGFNIICSICNKEFVDKSTFDVHIEEHDTIKGFLQRPQESDESLRNNPLTCSICKTEYDTVSNYQEHLIRHQVIQEKFVCNYCNLMMDSVEDFERHSTEHKGTPEKPVACKVIFATAKFHCKPCKIWFDSQSILDEHVTSHPATNDTLHLSSSKSLENGTATIAPAIEKKSHVCATCQKQFDDQIKLDAHVSTHDKDSSEKSIADPTVIHLSDDSNSADIEIIGIASSEENEEPTVKNTLVQETKKPPFLRVKNLKELLPYACSKCKAEFDTQVNLSKHVCTPHVKPTQDKGFSYSCTICKDYKCDNDADWNLHVLSHFPLSCSQKFSEAWYVMMKLRSGQQVFKCNICPSFDSLTVHTMRQHFLINHRDIYNPIFKCRVCRTFKTEMEQEIRRHEAAHFQHQSPLQQLTALSNQLSTAEPIELPKNLQQPLSIPPLIMTGNNTSTNKPEKFNDSQQLDNPNNFSRPGPNPSVIKSSNNVTSVQSLPIFTNSQKQAPTLQPDNNSNNFQQSDSNLPATSSGNNLPSLRPQQNVKNFMQPGSMHKQDNNSNNFQQAILIPTTTTTNLGNNFPTLQLVDNPNKQFIRPITFPVVTNLIQPLQNFDNSQQRDPTRQSDNNSNNFQQSISLPSVSDSNSKLPTLQSADSSTTVRHTLWIPPVTSSSNNLPSLQPAQISNNQSVSTLPPNDNCNNFRQSISIPSVTISGSNLSSIQQVDISNKFQPSASTPVVTSSGNNLPTLQPLHSFNNSQQPGSTLQPYNNSNNFQQSISIPPVTSSSSSLSSFQSMNNSQWSTATAQTFQIQINNGTPFNNMTNVMHTVPLYVTNVTYCCRICKIFKCFSEEELKAHESLHEFAQSTQPSKRLFRCKVCTNIFCPTEDHLKMHMEMYHKAEKSNVSQNQTQSNGTDNQLKCKHCHQSFASSAQLTRHVYNSHTLLDQRINDTQFRNSYPYTCELCSIGFLNEAFLQAHVRQIHPGVKLARQKVADTNTLYQCDTCGLLLISEATLNYHMRSHNIMGLQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01412697;
- 90% Identity
- -
- 80% Identity
- -