Basic Information

Insect: Tenthredo amoena
Gene Symbol: Gzf1
Assembly: GCA_963966615.1
Location: OZ016491.1:4424946-4426991[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.18 19 6.5 0.4 1 23 402 424 402 424 0.95

2 7 5.9e-06 0.00062 20.6 0.9 1 23 438 460 438 460 0.98

3 7 0.0044 0.46 11.6 0.1 2 23 467 489 466 489 0.95

4 7 0.0067 0.71 11.0 2.5 1 23 503 525 503 525 0.98

5 7 0.0001 0.011 16.7 4.1 1 23 531 553 531 553 0.99

6 7 7.7e-06 0.00081 20.2 0.1 1 23 559 581 559 581 0.98

7 7 8.1e-05 0.0085 17.0 2.5 1 23 587 610 587 610 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.18	19	6.5	0.4	1	23	402	424	402	424	0.95
2	7	5.9e-06	0.00062	20.6	0.9	1	23	438	460	438	460	0.98
3	7	0.0044	0.46	11.6	0.1	2	23	467	489	466	489	0.95
4	7	0.0067	0.71	11.0	2.5	1	23	503	525	503	525	0.98
5	7	0.0001	0.011	16.7	4.1	1	23	531	553	531	553	0.99
6	7	7.7e-06	0.00081	20.2	0.1	1	23	559	581	559	581	0.98
7	7	8.1e-05	0.0085	17.0	2.5	1	23	587	610	587	610	0.97

Sequence Information

Coding Sequence: ATGGAGAACATCATTCTAGACACTGACTTACAAGATAATTATCAAGCCACGATGAAAGGGATAAAATCTAATGGAGCTAATATATATGGACCAATTAAAACAGAAATCAAAGTAGAGCATTTCACAGAAATAGGAGAGGATTATTTTCACGCATTTATAGAAAACATAACATGTGAGGAGACAAAGATAGCTGCAGGGTGTCAACCCATATTATCGGAAATATACGAAATTCCAATATCTAAACAGAATTTGGAGATCTCTAAAGCGTTATTGCAGTTGGATGAAGTTAAATCTTTGCCATTGTTATGTAGACTTTGCGCAACTCAAGCCAATGATATGACATATATATTTGGCTCGACCGAACTACAAAAGAAAATTGCAAACAAAATTAAACACTGCCTACCTATTGCGGTGAAGCAGACCGATACTCTACCAAAACAAGTATGCAGCTTGTGCCTAGAGAAATTAGAACTGTGTTTTCAATTCCATGAAACTGTAACACAGGCTGAAAAGCAGCTTCTCATGTTCGATGAACAAACGTCAGGCAGATTTGAGGAAACAAGAGAACATTATCCAACTTCACCGCAATGTAATGGACAACACGTTATAAACGATGCAGGAAAATTAAACACCGCCTACAATGGGGACGGAAATAATAGCGCGTCGTGTAGTATTCTTGAGAAACTTTTGACAATAGATGAAACTATGGATAACAACATTACTTCAttcaatttaaagaaaaattcaaaggaaCTCAATAATCCAAACGGAAAAAATATCAGAAGGAGAAGTTCAAGCCATAAATCTCGAAGCGCAGATTCATTCAAGGAAGGGGTCAATCTCGGCAGAACATCAGCACCCCAAATAGAACGGAAAATATCTCAATCTGCACCGAATAATCCTGTAGGCGAAACACATACAAGAGAAAAGTCTAAATCCGATGAAGATGTGTCTACAGATTCAGCACTATATTCTCCTCCAGTTACCAGAAGCCATAGGACCTCTAATTGCCTGAGAGAAGAAGCCAACAGAGATAGGAGTCATGATAATATTCCGCTCTCTGGCAAAGAGGCCGTTGAGCATCATACTTCGACTGGTCAAAGCGTCGTTGGcaaatcaataaattgtcGGATTTGCCGAGAACCTCTTCAGACCGCTAAACAATGCTATATTCATGGCAGCATTCATGCTTCGACAAATTACTATCCCTGTTGTTTATGCGATGAAATTCTTAGGACTGAAAAAGATTGGAATGAGCACTGGACACAGCATGATACAGAGCGTAGAATGTCTACAAGAAGAACAGCAAAGTACCGGTGTGATGAATGTGGAGAGAAATTTGCGAATAAAGTCAAACTCAAGTCTCATAAACTTTCTCATAAGTCTCGCAGCGCTAAGCCTTGTGAGAAGTGCGGTGAAATTATGGATTCGGAGGAATCACTAAAAAAGCATATGCTAGTTGCACATAGACAAGGCAAGAAGTCTTCcgataagatgaaaaaaacgtATTCTTGCTTTATTTGTAGAAAGGAATTGAGAGAGAAAGCAAATCTGAATTGTCATATGCGAATTCACACCGGAGATCGACCCTTTAAATGTGACTTCTGCACGAAGACGTTCATCACTAAGCAAAGTAGAAAAGAACATCTTAGAACGCATACGGGTGAACGCCCCTTCGAATGTCCTATCTGTGCAAAGACTTTCACCACGGCCCGGGTATTGAGACGACACGCAAACGTTCATTCAGAGGATAAATCCTTTAAATGTTCTATGTGCGATAAATCATACAAGAATTTGTACTCAAGAACAGTGCACATGGCCAAATTTCATGCGTAG
Protein Sequence: MENIILDTDLQDNYQATMKGIKSNGANIYGPIKTEIKVEHFTEIGEDYFHAFIENITCEETKIAAGCQPILSEIYEIPISKQNLEISKALLQLDEVKSLPLLCRLCATQANDMTYIFGSTELQKKIANKIKHCLPIAVKQTDTLPKQVCSLCLEKLELCFQFHETVTQAEKQLLMFDEQTSGRFEETREHYPTSPQCNGQHVINDAGKLNTAYNGDGNNSASCSILEKLLTIDETMDNNITSFNLKKNSKELNNPNGKNIRRRSSSHKSRSADSFKEGVNLGRTSAPQIERKISQSAPNNPVGETHTREKSKSDEDVSTDSALYSPPVTRSHRTSNCLREEANRDRSHDNIPLSGKEAVEHHTSTGQSVVGKSINCRICREPLQTAKQCYIHGSIHASTNYYPCCLCDEILRTEKDWNEHWTQHDTERRMSTRRTAKYRCDECGEKFANKVKLKSHKLSHKSRSAKPCEKCGEIMDSEESLKKHMLVAHRQGKKSSDKMKKTYSCFICRKELREKANLNCHMRIHTGDRPFKCDFCTKTFITKQSRKEHLRTHTGERPFECPICAKTFTTARVLRRHANVHSEDKSFKCSMCDKSYKNLYSRTVHMAKFHA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01412641;
90% Identity: iTF_01412641;
80% Identity: -