Tamo011596.1
Basic Information
- Insect
- Tenthredo amoena
- Gene Symbol
- -
- Assembly
- GCA_963966615.1
- Location
- OZ016487.1:847317-850356[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-08 2.7e-05 24.3 0.0 11 40 1 29 1 34 0.86
Sequence Information
- Coding Sequence
- ATGATTCGCAATGGAATGTCAACTCTCAAAGCTAGTCAACAGTACAAAATCCCTCGTACAACTTTGCGGAATAAGCTCAAAGGTAAAGCGCCTGAGACGTCCGGCAGATGTGGGCCAGAATGTATACTTGGTCGTGctaccgaagaaaaattagaaaactgGCTGCTAGAAACTTGCCGCATGGGATTTCCTATCAACAAAGATTGCCTAATCTACTCAGTTAAACAGCTTGTCGAAGCAGAAAAATTGCCGAATGTATTTAAAAACAACCTTCCGGGACGGAAATGGTTTGAGGGGTTTTTGCGTCGCCACCCACGAGTAGCTCATAAAAAATCCGAGCATTTGAGTAAAGCCAGAGCTATTCTCACTGAGCATCGCATCCGATTGTGGTTTGCAGATATCGCTATGCAACTcgaaggaaaaattgaaatcttcCAGGACCCACGAAGAATCTTCAATATGGATGAAACGGCAGTTTATCTTTCACCAAGTGGAGGTCTCGTTTTGGCTGAAAAAGGCAAATCAGTGTATGATGTAGCTAGTAACGATAAAGAAAACGTAACGACTCTTTTCACTGTTAACGCTGCTGGAGAGTTTGCCCCTCCATTGACCGTGTACAAGTACGGACGTCTGCCGAGGATTTGCATAGAGTCTGCTCCAAAGCAATGGGGAATCGGGAAGACAGACAGCGGATGGATGACAAGCGAAGCGTTTTATGAGTATTTCACCAATGTCTTCCACCCATTTCTCGAAAAGGTCGATATTCCAATGCCCATCGTCGTGTTCTTAGACGGTCATGTTTCTCACCTGTCGATAGACCTGAGCTCATTCTGCAGAGAAAAACGAATAGAAATATGTTGTTTCCCATCCCATGCAACACACATTCTTCAGTCTCTCGATGTTGCTGTATTTTTTCCCCTCAAAAAGAAGTGGAAAACATTGGTTCCCAATTGGCACGTCAAAAATGAAGGCAGCGATGTCCAAAAACATCAAGTACCAGCATTACTATCGGCGCTTATTCACACGGAAAACTTTACCGAGACTATAAAGAATGGGTTTCGAAGGTGTGGCTTGTACCCTTTTGATGCGAATGCGGTGGACTACTCAAAATGCATTCAGGAAAACAAACAGAGCGATGAAGTTCCATATTCGGAGGGAAGAGGTAGCGAAGTTCGTCAATCTTCTGTCAGTCACCGTGAATACATCGAGAAGAAGATTCCACCGGCAGTTATGCTCCGGTTCAAGCATGTCAAAAATGCCAAAGTAGAATCGGAGGACGGCGACAGGTACGCAGCCCTTTACGATGTCTGGAGCAGCGCCGTTGAGGACGAATCAGCACGAGAAAAGGATACATCGTCTGAcacgtgtgaaaaaaataaaatggagcCGCGAACGTCCATCACGTCTCAACCTGTGGCGAGTCTTTCAGATGAGATTCTTGAACTCGACTTCCCTGAGTTCGAAATGATACCACCGGCAATCAGTTGTGATCAATCTTCAAAGTCCCTGGAGCCCGCTGTTGTAAGAGATACCCATACTTCAATCATAAACTGTGTAGTTATTCCCGgcgaaaatataattgaagatGAGAGTATTGCTAATTCAGATTTGACTTCGAAACTTATTTATGACAATCCAACAGGTTCTACAGATAATACTGATGAATTTTTGGCAACTAATATCCCTTTAGGTCAAAATTTGTCCGAAGAGAGTTTGCAGTGGCCACAACTGGCACTTCAGCTGTCGAAAACCAGTACATTCGATGGCCGCAACTGGTGA
- Protein Sequence
- MIRNGMSTLKASQQYKIPRTTLRNKLKGKAPETSGRCGPECILGRATEEKLENWLLETCRMGFPINKDCLIYSVKQLVEAEKLPNVFKNNLPGRKWFEGFLRRHPRVAHKKSEHLSKARAILTEHRIRLWFADIAMQLEGKIEIFQDPRRIFNMDETAVYLSPSGGLVLAEKGKSVYDVASNDKENVTTLFTVNAAGEFAPPLTVYKYGRLPRICIESAPKQWGIGKTDSGWMTSEAFYEYFTNVFHPFLEKVDIPMPIVVFLDGHVSHLSIDLSSFCREKRIEICCFPSHATHILQSLDVAVFFPLKKKWKTLVPNWHVKNEGSDVQKHQVPALLSALIHTENFTETIKNGFRRCGLYPFDANAVDYSKCIQENKQSDEVPYSEGRGSEVRQSSVSHREYIEKKIPPAVMLRFKHVKNAKVESEDGDRYAALYDVWSSAVEDESAREKDTSSDTCEKNKMEPRTSITSQPVASLSDEILELDFPEFEMIPPAISCDQSSKSLEPAVVRDTHTSIINCVVIPGENIIEDESIANSDLTSKLIYDNPTGSTDNTDEFLATNIPLGQNLSEESLQWPQLALQLSKTSTFDGRNW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00294391; iTF_00251989; iTF_00297468;
- 90% Identity
- iTF_00251989;
- 80% Identity
- -