Tsin081707.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tenodera sinensis
Gene Symbol
-
Assembly
GCA_030765045.1
Location
CM060973.1:97241895-97256639[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 3.2 4.8e+04 -3.7 0.1 3 7 44 48 43 50 0.64
2 16 0.026 4e+02 3.0 0.1 6 18 108 120 107 122 0.83
3 16 0.037 5.7e+02 2.5 0.0 6 14 126 134 125 141 0.80
4 16 0.05 7.7e+02 2.1 0.0 6 15 144 153 143 158 0.77
5 16 0.085 1.3e+03 1.3 0.0 6 14 162 170 161 176 0.81
6 16 0.085 1.3e+03 1.3 0.0 6 14 180 188 179 194 0.81
7 16 0.085 1.3e+03 1.3 0.0 6 14 198 206 197 212 0.81
8 16 0.085 1.3e+03 1.3 0.0 6 14 216 224 215 230 0.81
9 16 0.085 1.3e+03 1.3 0.0 6 14 234 242 233 248 0.81
10 16 0.085 1.3e+03 1.3 0.0 6 14 252 260 251 266 0.81
11 16 0.085 1.3e+03 1.3 0.0 6 14 270 278 269 284 0.81
12 16 0.085 1.3e+03 1.3 0.0 6 14 288 296 287 302 0.81
13 16 0.085 1.3e+03 1.3 0.0 6 14 306 314 305 320 0.81
14 16 0.085 1.3e+03 1.3 0.0 6 14 324 332 323 338 0.81
15 16 0.085 1.3e+03 1.3 0.0 6 14 342 350 341 356 0.81
16 16 0.076 1.2e+03 1.5 0.0 6 14 360 368 359 374 0.79

Sequence Information

Coding Sequence
ATGGTGTCTACCAGTCCACATATGGATAATGCAGAATATACGTACATCATGGTGTCTACCGGTCCAAATGTGATACAGGGAAACAGCCCACAGAAAGTACAGAATATACATCATAGTATCTATCAGTCAACATGTGGTACAAGGGAACAACCATTAAGGTACAGTATAAACACCAGTCCAGATGTGGTACAAAGGAACCCACATAAGATGCAGCATACATATACACAATGGATCTACCAGTCCTCGAAATGTGATGCAGAGGAACAACTCACACACAAAGGGTCTACCAGGCCCTTACATGGGATAGGCGATATCGAAGACACCGCAAAGAGTTCCCTCTGGCGGAACCGAGAAGTGGGCGGTCCTTACTCCGGTTCAGAAAACacttccctctggcggaacctAGAAGTGGACGGTCCTTACTCCGGCTCAGAAGACacttccctctggcggaaccgAGAAGTGGACGGTCCTTTCTCCGGCTCAGAAGACacttccctctggcggaacctAGAAGTGGACGGTCCTTTCTCCGGCTCAGAAGACacttccctctggcggaacctAGAAGTGGACGGTCCTTTCTCCGGCTCAGAAGACacttccctctggcggaacctAGAAGTGGACGGTCCTTTCTCCGGCTCAGAAGACacttccctctggcggaacctAGAAGTGGACGGTCCTTTCTCCGGCTCAGAAGACacttccctctggcggaacctAGAAGTGGACGGTCCTTTCTCCGGCTCAGAAGACacttccctctggcggaacctAGAAGTGGACGGTCCTTTCTCCGGCTCAGAAGACacttccctctggcggaacctAGAAGTGGACGGTCCTTTCTCCGGCTCAGAAGACacttccctctggcggaacctAGAAGTGGACGGTCCTTTCTCCGGCTCAGAAGACacttccctctggcggaacctAGAAGTGGACGGTCCTTTCTCCGGCTCAGAAGACacttccctctggcggaacctAGAAGTGGACGGTCCTTTCTCCGGCTCAGAAGACacttccctctggcggaacctAGAAGTGGACGGTCCTTTCTCCGGCTCAGAAGACacttccctctggcggaacctAGAAGTGAACGCACCTTACTCCGGCTCAGAAAACACTTCCCTCTAG
Protein Sequence
MVSTSPHMDNAEYTYIMVSTGPNVIQGNSPQKVQNIHHSIYQSTCGTREQPLRYSINTSPDVVQRNPHKMQHTYTQWIYQSSKCDAEEQLTHKGSTRPLHGIGDIEDTAKSSLWRNREVGGPYSGSENTSLWRNLEVDGPYSGSEDTSLWRNREVDGPFSGSEDTSLWRNLEVDGPFSGSEDTSLWRNLEVDGPFSGSEDTSLWRNLEVDGPFSGSEDTSLWRNLEVDGPFSGSEDTSLWRNLEVDGPFSGSEDTSLWRNLEVDGPFSGSEDTSLWRNLEVDGPFSGSEDTSLWRNLEVDGPFSGSEDTSLWRNLEVDGPFSGSEDTSLWRNLEVDGPFSGSEDTSLWRNLEVDGPFSGSEDTSLWRNLEVNAPYSGSENTSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-