Tsin012999.1
Basic Information
- Insect
- Tenodera sinensis
- Gene Symbol
- pnr
- Assembly
- GCA_030765045.1
- Location
- CM060962.1:138786900-138832384[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.012 1.8e+02 4.1 0.4 20 29 210 219 202 221 0.81 2 2 1.5e-18 2.2e-14 55.0 3.7 1 35 386 419 386 420 0.98
Sequence Information
- Coding Sequence
- ATGGGGAAGTGCAGCAAAGATGCATATGGGTTAAAAGCAGTAGACCATCTGCATGATTTAGGCAATGGAACAGGGGCACCTGGAGGGGGAGAGGCCAGCAATCTTCTGAGAACGCTCATCTCCTGTAGAAAACTTGGCATTTCTCCCAATGAAGCAGCAGCAAACAATCATGTTATTCCTTCCCTTCAGCATTCTCTAAAATCTCGTAGTAGATTATACCGTGCAATCTTGCCTGCACCAGAGGAGCCTCACTCAGCTGCAGTTTTGGGAAACAGAACAAATCTACTATCATCTGTGGAGGTACCATCAACATTGATTGCTGTGGCGATATCTGGCAATACTCCTCCTGTCAAGCAGGATGGTAATAGAAGGAAACAAAGTTGTCCTTCAAAAGCTGCTTCAGAAGTGTCCTCACCCCCATATATGCGTGGGGAGACTTACATACCAGATTTCACTGGCAATAGCCCTTGGTGTAATATTTCTGCGGTCAAGACAGGAAGGGGAACCAATTTACCTGAATATATCTTCTGTGGATACGAGTGCGCCGCAGTTCGCCCGTATGTCCCGAACCCGATGCGCTGCTTTCAGTGTCAGAGGTTCGGGCGTACTAGGAGCTCGTGTACCCATCCTGCCCTTTGTGAACGTTGTGGCTTGGCAGCACATGAAGACACGGCTTGTACTCAGGACCCGCACTGCGTAGACTGTGGAGGGAATCATCCATCGAGTTCCCGGCAGTGTGCGCAGTATTCAGACGAGAAGCGAATACAGGAGTTGCACCACGACGGCGCTTCGAGCAACTTAAAACCAGCTAACACCATCGGTTACGCGTCAGCTGCACGCCGCCCTCCTGTGGCCACTGTCGGCTTGCAGCATGTGCCAGTTTCGGATGCCTCCATCCAAACCTTCTGGTCAGGTCGCCCTACTACTCCTGCGACTGTATCTACCGCAGTACAAGCGCCAGCTCTCGAACCGTCCCCATATGCCACCACTTCTCAGGATAGACCTCGTTCTAGGCATATTGTTCGGGCCAACAGTCCTACgtcctcaatgaagtcccgctccgcgagccgtggGGGATCTTCCGACTCCCGGACATCCGAGGAGTCCCTGAGGACggattggtcccaaCTAGCAGCCAGGCGAATAGATATGTCCTGCAGTAATTGTGGTACAATGACCACTACCATTTGGAGACGAAATCCAGAAGGAGAGATGGTGTGTAATGCGTGTGGATTATACTACAAATTACATGGTGTAAACCGTCCTGTAACAATGCGGCGAGACACTATCCATACAAGGCGCAGACGTCCTAAAGGTGAAAAGGCAAATAGTCGACATAGAAACAAATCTGGAAACAGTGGGAGCAGTAATGAAGATCCTGTAGACATGTTGGCAGCCTTGCGAAGACAGATTCAGCCTCACCTTATGTTAGCATTACAATCAAATGCTGAAAACAAAAACACTGCCTCAGAAGGAACATCATGCACAAATCCAGCAGCAATGTCAGGAGGAGTGGCAGTTTCTGGTGGAAGCTATTCCATGGTACAGGTAAAGAGAGAACTAGTAGAATCTGACGCTGAAGAGGATGAAGAGGAGAATATGGCTGATCTGCCACTGAACCTGGTAGCTACATCACTGGCAGAACATCCAACTACACCACAGTGA
- Protein Sequence
- MGKCSKDAYGLKAVDHLHDLGNGTGAPGGGEASNLLRTLISCRKLGISPNEAAANNHVIPSLQHSLKSRSRLYRAILPAPEEPHSAAVLGNRTNLLSSVEVPSTLIAVAISGNTPPVKQDGNRRKQSCPSKAASEVSSPPYMRGETYIPDFTGNSPWCNISAVKTGRGTNLPEYIFCGYECAAVRPYVPNPMRCFQCQRFGRTRSSCTHPALCERCGLAAHEDTACTQDPHCVDCGGNHPSSSRQCAQYSDEKRIQELHHDGASSNLKPANTIGYASAARRPPVATVGLQHVPVSDASIQTFWSGRPTTPATVSTAVQAPALEPSPYATTSQDRPRSRHIVRANSPTSSMKSRSASRGGSSDSRTSEESLRTDWSQLAARRIDMSCSNCGTMTTTIWRRNPEGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKANSRHRNKSGNSGSSNEDPVDMLAALRRQIQPHLMLALQSNAENKNTASEGTSCTNPAAMSGGVAVSGGSYSMVQVKRELVESDAEEDEEENMADLPLNLVATSLAEHPTTPQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -