Basic Information

Insect: Tenodera sinensis
Gene Symbol: -
Assembly: GCA_030765045.1
Location: CM060970.1:134006274-134028041[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 2.9e-06 0.0011 21.5 8.3 1 23 97 119 97 119 0.97

2 7 1.2e-05 0.0048 19.5 1.5 1 23 125 147 125 147 0.99

3 7 4.2e-06 0.0017 21.0 0.3 3 23 155 175 153 175 0.96

4 7 3.1e-05 0.012 18.3 1.7 1 23 182 204 182 204 0.97

5 7 4.4e-05 0.017 17.8 0.7 1 23 210 232 210 232 0.97

6 7 0.00011 0.044 16.5 5.2 1 23 238 260 238 260 0.98

7 7 8.9e-07 0.00035 23.1 1.0 1 23 266 288 266 288 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	2.9e-06	0.0011	21.5	8.3	1	23	97	119	97	119	0.97
2	7	1.2e-05	0.0048	19.5	1.5	1	23	125	147	125	147	0.99
3	7	4.2e-06	0.0017	21.0	0.3	3	23	155	175	153	175	0.96
4	7	3.1e-05	0.012	18.3	1.7	1	23	182	204	182	204	0.97
5	7	4.4e-05	0.017	17.8	0.7	1	23	210	232	210	232	0.97
6	7	0.00011	0.044	16.5	5.2	1	23	238	260	238	260	0.98
7	7	8.9e-07	0.00035	23.1	1.0	1	23	266	288	266	288	0.99

Sequence Information

Coding Sequence: ATGGATGTGcaacagaagaagaaggagaaccTGGAGAATGTTCCTGTCACTGTCTATAGGATAATTGGCGTACCTTCCAATATTCAAGGGCTTAACAACACGACAATACAGATAGTGCCCAAGTTGGAGGATGACGATGACCTGGACAATTTAGGAGACTCGGAAAAGCAGGACAATGTAACTTACGCATCATTTGTGTTAGAAGAAGATGGAGAGACGTCAGATCATAATCAACCAACACCACAGGTGATATGGACAACAAAACGGGACAAGTCGATGTTGTATCCATTTGCCTGCACGATGTGCCCCAAAAGGTTCAAACACCATAGTCACCTGAAACGACATATCAACACCCACACAGGAGAAAGGCTTTATCGCTGTGATACCTGCAACAAGACGTTTCTGGATGCTTCTACTCTGTCTCGGCATCGCAGGATTCACTCTGGAGACAAGCCCTGGGCATGCAAGGTGTGCCAGAAAAGTTTTGGGACGTTGGGCTCATTACGTCGCCATATGACAATCCATAATCAGGAAGGCCGGCCTTTCCAGTGCGACGTATGTCTGAAACGTTTCCCAGATAACAGCAGCTTCCAAAAGCACAGGTTTATCCACACAGGTATAAAGCCACACGTTTGTGAGCAGTGTGGCAAGGCATTTGTGCACATCGGGGACTTGAACGGGCATCGCAAGATCCACGTGGAGGTAAAGCCCTACAACTGTCAACACTGTCACAAGGACTTTGCCAAGTATAGCAACTATGCTCGACACTTGCAGATACACGAGGGTGAACGTGAGTACACATGCACCCTCTGTGGCGTGAGCTACAACTATCAGAGCTCTCTGACTCGCCACCTGCTCACACATGTCCATCGCGGCAACAAGGCGCTACTTGAGGCCACTAAAAAGGCTGCCACTGAACAAGACACCAACGTAAATACACCCTTATCAGGTAAGGACCTCTTTATCCTTCCCGATGATCCTTCCATCATAGCCAAGCACATAAAAGTTACGAGAACAAGAATGAAACATCGTATGATCGAGCATTTAAAGAAAACTTGCATGAAAACTGGTAGTGAAATTGCAAAAGAAACTTTAGACACTGAAGCCGTGAGTAAAGACACTTTAAATGATAAATCAAAAGAAGAGGTCGCTTCAGAAACGGTTAATTCAACGTCATTGGTGGATGTTCTGAAAAACAATGGCATAGAAGTTCCTCAAAGTGCTGCTGTGATGATACTGAACAGTGCCTCTACAGTTGTTCTGTCAGTGGACTCGTCAACGCAGGAACAAGCTGATCCGACAGTTCTACCCCCAGAGGATGAGACTGTTTCACGCCTCTCCACAACTGAAGATGTCCAGCTCTTGTTGTACTCGGCAGAAAACTTTGGTTCAACAAAAGACTTTTCAGAGCCTCTGCTGCCTCCGCCGGcatcgtcgtcgtcatcttcGGAACCTTTGCTAGCCTTGTTGTCACACCCCATTGATGAAGTCGGAGAGATGGAGGTGTCTCATGTAGCTGACGATGCTGTGCCCAGCACTTCCAAGGCGTTTGACTGTGGCTTTCAAGCCCCTGAGGCTGATTCTGAAGCAGTTGTTAAAACTGAGAATGTTGAACTTTCTGTAGAGCCTAGTACCGGGAAAGTGTTGGCAACTTTATCAAATGTCAGTGACCCAGAGTGCATGCTGCCATTGAATGCTTAA
Protein Sequence: MDVQQKKKENLENVPVTVYRIIGVPSNIQGLNNTTIQIVPKLEDDDDLDNLGDSEKQDNVTYASFVLEEDGETSDHNQPTPQVIWTTKRDKSMLYPFACTMCPKRFKHHSHLKRHINTHTGERLYRCDTCNKTFLDASTLSRHRRIHSGDKPWACKVCQKSFGTLGSLRRHMTIHNQEGRPFQCDVCLKRFPDNSSFQKHRFIHTGIKPHVCEQCGKAFVHIGDLNGHRKIHVEVKPYNCQHCHKDFAKYSNYARHLQIHEGEREYTCTLCGVSYNYQSSLTRHLLTHVHRGNKALLEATKKAATEQDTNVNTPLSGKDLFILPDDPSIIAKHIKVTRTRMKHRMIEHLKKTCMKTGSEIAKETLDTEAVSKDTLNDKSKEEVASETVNSTSLVDVLKNNGIEVPQSAAVMILNSASTVVLSVDSSTQEQADPTVLPPEDETVSRLSTTEDVQLLLYSAENFGSTKDFSEPLLPPPASSSSSSEPLLALLSHPIDEVGEMEVSHVADDAVPSTSKAFDCGFQAPEADSEAVVKTENVELSVEPSTGKVLATLSNVSDPECMLPLNA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00821241;
90% Identity: -
80% Identity: -