Basic Information

Insect: Tenodera sinensis
Gene Symbol: -
Assembly: GCA_030765045.1
Location: CM060967.1:9026664-9040070[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.19 74 6.4 0.4 2 17 262 274 261 279 0.75

2 15 0.041 16 8.4 0.8 3 23 282 303 280 303 0.92

3 15 0.0028 1.1 12.1 0.9 1 23 308 332 308 332 0.96

4 15 4.7e-07 0.00019 24.0 0.5 3 23 340 360 339 360 0.98

5 15 4.4e-06 0.0018 20.9 5.0 1 23 367 389 367 389 0.98

6 15 0.01 4.1 10.3 2.3 3 23 397 417 395 417 0.91

7 15 3.6e-05 0.014 18.0 0.9 1 23 423 445 423 445 0.98

8 15 9.7e-06 0.0038 19.8 6.0 1 23 450 472 450 472 0.98

9 15 4.3e-06 0.0017 20.9 0.6 1 23 494 516 494 516 0.99

10 15 5.4e-06 0.0021 20.6 1.2 1 23 522 544 522 544 0.98

11 15 0.0039 1.6 11.6 0.7 1 23 550 572 550 572 0.97

12 15 4.7e-05 0.019 17.7 3.2 1 23 578 600 578 600 0.98

13 15 5e-07 0.0002 23.9 0.7 1 23 606 628 606 628 0.97

14 15 0.00021 0.084 15.6 1.1 1 23 634 656 634 656 0.98

15 15 0.056 22 8.0 2.0 2 20 663 681 663 683 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.19	74	6.4	0.4	2	17	262	274	261	279	0.75
2	15	0.041	16	8.4	0.8	3	23	282	303	280	303	0.92
3	15	0.0028	1.1	12.1	0.9	1	23	308	332	308	332	0.96
4	15	4.7e-07	0.00019	24.0	0.5	3	23	340	360	339	360	0.98
5	15	4.4e-06	0.0018	20.9	5.0	1	23	367	389	367	389	0.98
6	15	0.01	4.1	10.3	2.3	3	23	397	417	395	417	0.91
7	15	3.6e-05	0.014	18.0	0.9	1	23	423	445	423	445	0.98
8	15	9.7e-06	0.0038	19.8	6.0	1	23	450	472	450	472	0.98
9	15	4.3e-06	0.0017	20.9	0.6	1	23	494	516	494	516	0.99
10	15	5.4e-06	0.0021	20.6	1.2	1	23	522	544	522	544	0.98
11	15	0.0039	1.6	11.6	0.7	1	23	550	572	550	572	0.97
12	15	4.7e-05	0.019	17.7	3.2	1	23	578	600	578	600	0.98
13	15	5e-07	0.0002	23.9	0.7	1	23	606	628	606	628	0.97
14	15	0.00021	0.084	15.6	1.1	1	23	634	656	634	656	0.98
15	15	0.056	22	8.0	2.0	2	20	663	681	663	683	0.93

Sequence Information

Coding Sequence: ATGAGCAGCTGGGAAATATGCAgaatatgtggtggaaatgattGTGAATTAGTTCCAATATATGATGACAATGGCATCACGTTGCAGTTGGAAGAGAAGATAAACCATTACCTCCCAATAACTTTAAAACTGGCACCGTGTCAACCAAACAACACGGCATCCATAACATCAAGAAACGTGCTATCCCCAGAATATGAGGTTTTGGATTTGGACGAGGTGATTGTCATGATGAAGGCCGCTGACACTATTACAGGATGCATTGCTCTACATTACACCCATCGACCAGGCAAACCTAGTATTCCAGAGTTTATAAATTTGTTTGACACCCCAAATCGAAAGTTAATAATTCAACTGGATGCCTTCTTAAATGAAAGAACACACGAGATTTCCAAGTGGACAAAGGAGGCCACGGCACTGACACGAACAAATAATGGAGTTGTTTATGAGAAAGAAAGTGTAGAGGCAAGTATTGTAAAGGATGATAATTTAGAGGAGAGTTGCCAGGAACCAGTGTCTGAGATGGAGGTTTGTGAAGGACTTTATGTAGACGTGAAGGAGGAACAACCTGACAATTGTGTAACATGTGACCCAGAAGCAGACTTGGAAGGCAAGGAGGAAGTTGAGACAACTACAGATATTGTGGAGTTATTGGTTGACAAGGAAGACAAAGATGAGGAGAACGACAGCTCAGAAGACATTAAAGAGGAGATTGCAAAAGGTAATGAAGAAGAGGAAGTAAGGACAATTTTTCTGGTGAATGGTGATAGCGGTGGAGAAAGTTCTGTGTGTAAATACTGTCACCAGACCTTTGAGGACCTGGAATCTCACTTGCAGAGCAGCATTTGTGAATACTGTGGGACACATTTCGCATGTCCAGGAACATTACAGATTCACGAACAGCTGGAACATCAGAAAGAACATTTTAGATGCACGATTTCTGGTTGTTTCAAAAAGTTTCAGGACAAAAACAAGTTGGAAGAACACATTGCTCAGCACAACATGGACCAACCATGGCTCTGTGACGTATGTGGGAAGAGCTTTGTAACAGCGACCAATCTCCGCTCACACTATCGCTCGCATCAGGAGACAGCCAAGGAACACAGATGTGACATGTGTTCCAAGGAGTTTCGCTCTCGTTTCAACTTGCGCAAACATATGATGTCCCACACAGGTGAGAAACCATTCCTGTGCGAATGCTGCTCCAAACGGTTTGCAAGCAAGGAGACCTTGAAGCAACATTTGGTAATACATAGTCGTGAGAAGCCATTTAAATGTACCATGTGTCCATTCAGTACAGTGCGCAGGGGCAACTTGGCAAAGCACTACGAGACACATGCAGATGCTAAATTTGAGTGTAAGATTTGTCACAAGTCATTTGCTACAAGATATGACTTGCAAAGCCATCATTACACCCACTCTGATGAAGAACTCAGCATGATACTGGAACTGGAAGGACCTGGCATGCTTGTCTGTAGGACCTTCAGATGTGAGCAGTGTGGGAAATTCCTGTCTAGCAAGGCTTCTCTTGTAATCCATCAGCGAATGCACTCCGGGGATCGCCCATTTCAGTGTTCACAATGTGGCAAGCGTTTTAGCCAGAAACCGTCACTGGACTATCATGTGCGTCTGCATACTGGTGAGCGTCCACATCAATGTGTCTTTTGTGGACAGGGTTTCAATTCCAAAGCTGCTAAAGAGAGTCACGAGCGTGTGCACACTGGGGAGAAGCCCTATCGTTGCAACACATGCTCTGCCAGATTCCGCAACTGTGCTAATCTCCGTCAGCACCAGCTCATTCATAATGACTCAAGGGAGCATCCCTGTAGTGTGTGTGGAAAGCGGTTCCGCAGGCGTGAGGCCGTTCAAGTTCACATGAGGGTTCACACTGGCGAGCGTCCCTACTCGTGCCCACTGTGCTTGAAGAGGTTTACACAGAAGGGTGACCAACTTAAGCACACTCGTGGGCACATAATGAAGAATGATAGAAGATGTTCATTCTGTACTATAGAATTCCCTAACAGAAGAGAGTTAAAACAACACAAATGTGAGGCAAAGATTATCACTGACAGTCAACATTTTGATACAGTGTTACTGAATCCAACACAACTAATAGCTAACACTGAGATTACTGTGGTTACTGCTGAGTTATCAGATACAGTATAG
Protein Sequence: MSSWEICRICGGNDCELVPIYDDNGITLQLEEKINHYLPITLKLAPCQPNNTASITSRNVLSPEYEVLDLDEVIVMMKAADTITGCIALHYTHRPGKPSIPEFINLFDTPNRKLIIQLDAFLNERTHEISKWTKEATALTRTNNGVVYEKESVEASIVKDDNLEESCQEPVSEMEVCEGLYVDVKEEQPDNCVTCDPEADLEGKEEVETTTDIVELLVDKEDKDEENDSSEDIKEEIAKGNEEEEVRTIFLVNGDSGGESSVCKYCHQTFEDLESHLQSSICEYCGTHFACPGTLQIHEQLEHQKEHFRCTISGCFKKFQDKNKLEEHIAQHNMDQPWLCDVCGKSFVTATNLRSHYRSHQETAKEHRCDMCSKEFRSRFNLRKHMMSHTGEKPFLCECCSKRFASKETLKQHLVIHSREKPFKCTMCPFSTVRRGNLAKHYETHADAKFECKICHKSFATRYDLQSHHYTHSDEELSMILELEGPGMLVCRTFRCEQCGKFLSSKASLVIHQRMHSGDRPFQCSQCGKRFSQKPSLDYHVRLHTGERPHQCVFCGQGFNSKAAKESHERVHTGEKPYRCNTCSARFRNCANLRQHQLIHNDSREHPCSVCGKRFRRREAVQVHMRVHTGERPYSCPLCLKRFTQKGDQLKHTRGHIMKNDRRCSFCTIEFPNRRELKQHKCEAKIITDSQHFDTVLLNPTQLIANTEITVVTAELSDTV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01410943;
90% Identity: iTF_01410943;
80% Identity: -