Tsin053513.1
Basic Information
- Insect
- Tenodera sinensis
- Gene Symbol
- -
- Assembly
- GCA_030765045.1
- Location
- CM060966.1:179960366-179961932[-]
Transcription Factor Domain
- TF Family
- GTF2I
- Domain
- GTF2I domain
- PFAM
- PF02946
- TF Group
- Other Alpha-Helix Group
- Description
- This region of sequence similarity is found up to six times in a variety of proteins including GTF2I. It has been suggested that this may be a DNA binding domain [2, 1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.055 2.5e+03 1.1 0.0 36 49 13 26 6 34 0.84 2 14 0.033 1.5e+03 1.9 0.0 36 48 40 52 33 56 0.86 3 14 0.048 2.2e+03 1.3 0.0 36 49 67 80 58 84 0.86 4 14 0.049 2.2e+03 1.3 0.0 36 49 94 107 86 111 0.86 5 14 0.18 8.1e+03 -0.5 0.0 40 49 125 134 120 145 0.85 6 14 0.051 2.4e+03 1.2 0.0 35 49 147 161 138 172 0.86 7 14 0.011 4.9e+02 3.4 0.0 36 49 175 188 167 198 0.87 8 14 0.049 2.2e+03 1.3 0.0 36 49 202 215 192 218 0.86 9 14 0.011 5.3e+02 3.3 0.0 36 49 229 242 219 246 0.87 10 14 0.013 6.1e+02 3.1 0.0 36 49 300 313 280 317 0.87 11 14 0.062 2.8e+03 1.0 0.0 36 49 327 340 319 344 0.87 12 14 0.18 8.1e+03 -0.5 0.0 40 49 358 367 353 378 0.85 13 14 0.058 2.7e+03 1.1 0.0 36 49 381 394 374 403 0.86 14 14 0.012 5.4e+02 3.3 0.0 36 49 408 421 399 425 0.86
Sequence Information
- Coding Sequence
- ATGGACAAGTTAGGGGATCTGCACACTGCAACTGTGGCCTTGTACTCACCAGGCCTGCCAGAGGAGATCCCCTGGAAACCCATACAGCTGATGACTGCTGTTGTTGACAGGTGGGGGGCCTTGTACCCCTCAGGCCTGCCAGAGGGGATCCCATGGACACCCATACAGCTGATGACTGCTGTTGTTGACAGGTGGGGGGCCTTGTACCCCTCAGGCCTGCCAGAGGAGATCCCCTGGAAACCCATACAGCTGATAACTGCTGTTGTTGACAGGTGGGGGGCCTTGTACCCCTCAGGCCTGCCAGAGGAGATCCCGTGGAAACCCATACAGCTGATAACTGCTGTTGTTGACAGGTGGGTGGCCTGGTACCCCTCAGGCCTGCCAGAGGAGATCCCGTGGAAACCCATACAGCTGATGACTGCTGTTGTTGACAAGTGGGGGGCCTTGTACTCACCAGGCTTGCCAGAGGAGATCCCCTGGAAACCCATACAGCTGATGACTGCTGTTGTTGACAGGTGGGGGGCCTTGTACCCCTCAGGCCTGCCAGAGGGGATCCCATGGAAACCCATACAGCTGATGACTGCTGTTGTTGACAGGTGGGGGGCCTTGTACCCCTCAGGCCTGCCAGAGGAGATCCCCTGGAAACCCATACAGCTGATGACTGCTGTTGTTGACAGGTGGGGGGCCTTGTACCCCTCAGGCCTGCCAGAGGGGATCCCATGGAAACCCATACAGCTGATGACTGCTGTTGTTGACAGGTGGGGGGGCCTTGTACCCCTCAGGCCTGCCAGAGGAGATCCCCTGGAAACCCATACAGCTGATGACTGCTGTTGCCTGCCAGAGGAGATCCCCTGGAAACTCATACAGCTGATAACTGCTGTTGTTGACAGGTGGGTGGCCTTGTACCCCTCAGGCCTGCCAGAGGGGATCCCGTGGAAACCCATACAGCTGATAACTACTGTTGTTGACAGGTGGGTGGCCTTGTACCCCTCAGGCCTGCCAGAGGAGATCCCGTGGAAACCCATACAGCTGATAACTGCTGTTGTTGACAGGTGGGTGGCCTGGTACCCCTCAGGCCTGCCAGAGGAGATCCCGTGGAAACCCATACAGCTGATGACTGCTGTTGTTGACAAGTGGGGGGCCTTGTACTCACCAGGCTTGCCAGAGGAGATCCCCTGGAAACCCATACAGCTGATGACTGCTGTTGTTGACAGGTGGGGGGCCTTGTACCCCTCAGGCCTGCCAGAGGGGATCCCATGGAAACCCATACAGCTGATGACTGCTGTTGTTGACAGGTGGGGGGGCCTTGTACCCCTCAGGCCTGCCAGAGGAGATCCCCTGGAAACCCATACAGCTGATGACTGCTGTTGTTGA
- Protein Sequence
- MDKLGDLHTATVALYSPGLPEEIPWKPIQLMTAVVDRWGALYPSGLPEGIPWTPIQLMTAVVDRWGALYPSGLPEEIPWKPIQLITAVVDRWGALYPSGLPEEIPWKPIQLITAVVDRWVAWYPSGLPEEIPWKPIQLMTAVVDKWGALYSPGLPEEIPWKPIQLMTAVVDRWGALYPSGLPEGIPWKPIQLMTAVVDRWGALYPSGLPEEIPWKPIQLMTAVVDRWGALYPSGLPEGIPWKPIQLMTAVVDRWGGLVPLRPARGDPLETHTADDCCCLPEEIPWKLIQLITAVVDRWVALYPSGLPEGIPWKPIQLITTVVDRWVALYPSGLPEEIPWKPIQLITAVVDRWVAWYPSGLPEEIPWKPIQLMTAVVDKWGALYSPGLPEEIPWKPIQLMTAVVDRWGALYPSGLPEGIPWKPIQLMTAVVDRWGGLVPLRPARGDPLETHTADDCCC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -