Tsin066924.1
Basic Information
- Insect
- Tenodera sinensis
- Gene Symbol
- bab1
- Assembly
- GCA_030765045.1
- Location
- CM060969.1:122313265-122323229[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.9e-14 1.3e-10 43.0 0.1 3 45 404 446 402 446 0.92
Sequence Information
- Coding Sequence
- ATGGGAAGTTCCACACAGCAATACTGCTTAAGGTGGAACAACCATCGGAGTAACCTACTAGCTGTATTTGAGGAGCTGCTTCACAATGAAGCCTTCACGGACGTAACGCTAGCCTGTGAGGGGGGTCCGCAAGTAAAGTGCCACAAAGTGGTGCTAGCAGCATGTTCCAGCTACTTCCAGATGTTGCTGGCCGAGGTGAACTGCAAGCATCCCATTGTGGTGCTCAAGGATGTCAAATACACAGAGATGAAGGCGATATTAGAGTATATGTACAGAGGTGAAGTGAATGTGGCACACGACGAACTGGCTGCCTTGCTCAAAGTTGCAGAAGCCCTCAAGGTGAAGGGTCTTGTAGAAGAAACTGCAGGAAGCATGTCTCACTCTCATATGTCACCACCCAAGGATTCAGCCGAAGTGCGGCAGGAACAGCAagtagagaggcgtagagaggaTGCCCCACCTTCGTCCCAACACTCCCCACCTAGCATCAGTACCTCTGCGGCTAACTCCTCACCTATTCCTCACAGCAGTAGTAACATCTCACCTCCTCATTCCTCAGGCATCCCTGGGCCACACTTCGAGAAGAATCCTTATCATCTGTACGGAAAGTCACCGGTGATGGAGAGGAGTGGAGGTCGGATGAATCTGCCCATGTGGGCCATGCCAGGGCTACCTCTGCCCCACCATCCCTCCCCTGTGCCTGCCCCAGGACACCCTCATAccactgcagcagcagcagccatgTTAAACAGCTGCTACGAGGCAGCTAGTGCTGCCGATATGTCTCCGCTAAAACGTAAGAAGCTGCAGAGTCTGCTAATGAGCAGAGATACACCCATTCTTCGCACAGTATTGGGTCAAGGTCAACAGGGACCACAGGGATCCCAGGGACAGGCAGATTCCTCTCAACCAATGTCTCTAGTGTGTCAACCAGACAGCCATGTCGAACGAATACACTCCAATGGGTCTGCACAGGACACTGAAAAGagCATGAAAACCGAACCATCCTTAGAAGAAGCTCGTTCTCCCTATACTGACATCTCGTTTATGGATGAGGATACAAGTGATAAGAATTCAAAGAATATGCTGTCGCAGTCTTTTCCAGGATGTGGTGGAGATGTCCCATCTCTTCAAGGTGTTTCTCCTGGAATAGCAACTTATGTGCCTACACAGAAACCAGAATGGAAGCGCTACAAGCAGTACACTAGAAACGACATCATGTCAGCGATTGAGGCAGTCCGCACCGGAATGTCAGCTCTCCAGGCTGCACGCAAGTATGGGGTCCCTAGTCGCACGCTTTATGATAAGGTAAAGAAGATGGGGATCACAACGAGCCGCCCATTTAACAAGCGAGGTTCTAACGTGGGCACTGGTGGTTCAAGCTATTATCCTTATAGCAGTAGTGGTGGCAATGGTGGGTCAGGAACCAACTCAATAGGGGGTGTGTTTGGAGCAGTGGGTGGAGGTAGCGAAGGTGATGAGCAGGTGCTAAATCCACCTCCAGGAGGTGCCATTATGGAGCCACTGTTCCTACAACATGCACTAGATGGCATGAAACGTGAAATAGGAGAACGTGAAGCTATTGCGGCAATGGCTGCAGCAGCGGCTCATGCAGCAAGGAGTGGTAACTCATCATCAAGTCCAGGAGAAAACGGAAATGGTAGTGGTCACTCCCCAAGTCCCAGTCCGAGCCTCATCAAATATATGAGGGGACATAACAGTATGACGCCCAGTCCGGCAGCTCCAGGTAATGAAATCCGTCCTCCCAGTGGTGGCAATGAAGGTGGCGAGGAAGATGATGACCAGGTGGAGGATCTGTCGGTGACTCGGAAACCTGAGCCTATGCGGGTTATCATGCCCCCAATGAGTGCCACCCCCTCGGCAGGAAAAAAAGATGAAGTGCATGGTgaggatgaggtgagagaacACTGTTCCCCCGATGGGCCTCAGAGTACTCCCATAGAAACGGCTGAACGGGATTGA
- Protein Sequence
- MGSSTQQYCLRWNNHRSNLLAVFEELLHNEAFTDVTLACEGGPQVKCHKVVLAACSSYFQMLLAEVNCKHPIVVLKDVKYTEMKAILEYMYRGEVNVAHDELAALLKVAEALKVKGLVEETAGSMSHSHMSPPKDSAEVRQEQQVERRREDAPPSSQHSPPSISTSAANSSPIPHSSSNISPPHSSGIPGPHFEKNPYHLYGKSPVMERSGGRMNLPMWAMPGLPLPHHPSPVPAPGHPHTTAAAAAMLNSCYEAASAADMSPLKRKKLQSLLMSRDTPILRTVLGQGQQGPQGSQGQADSSQPMSLVCQPDSHVERIHSNGSAQDTEKSMKTEPSLEEARSPYTDISFMDEDTSDKNSKNMLSQSFPGCGGDVPSLQGVSPGIATYVPTQKPEWKRYKQYTRNDIMSAIEAVRTGMSALQAARKYGVPSRTLYDKVKKMGITTSRPFNKRGSNVGTGGSSYYPYSSSGGNGGSGTNSIGGVFGAVGGGSEGDEQVLNPPPGGAIMEPLFLQHALDGMKREIGEREAIAAMAAAAAHAARSGNSSSSPGENGNGSGHSPSPSPSLIKYMRGHNSMTPSPAAPGNEIRPPSGGNEGGEEDDDQVEDLSVTRKPEPMRVIMPPMSATPSAGKKDEVHGEDEVREHCSPDGPQSTPIETAERD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01410868; iTF_00955739; iTF_00955497; iTF_00434941; iTF_00434736; iTF_00995135; iTF_00995321;
- 90% Identity
- iTF_00955739;
- 80% Identity
- iTF_01410868;