Basic Information

Insect: Tenebrio molitor
Gene Symbol: RREB1
Assembly: GCA_963966145.1
Location: OZ014539.1:32829915-32838872[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00011 0.0095 16.9 0.8 1 23 80 102 80 102 0.99

2 16 0.0005 0.042 14.9 0.5 1 23 114 136 114 136 0.98

3 16 0.00023 0.02 16.0 6.2 1 23 142 164 142 164 0.98

4 16 0.35 30 5.9 0.0 1 22 224 246 224 248 0.79

5 16 0.034 2.9 9.1 1.1 2 23 254 276 254 276 0.97

6 16 7.5 6.4e+02 1.8 1.1 1 19 321 339 321 341 0.83

7 16 0.079 6.8 8.0 0.1 1 23 477 499 477 499 0.96

8 16 9e-06 0.00077 20.4 0.8 1 23 508 530 508 530 0.99

9 16 0.00091 0.078 14.1 3.1 1 23 536 559 536 559 0.97

10 16 0.00054 0.046 14.8 3.0 1 23 942 965 942 965 0.97

11 16 0.00061 0.052 14.6 0.5 2 23 1175 1196 1174 1196 0.97

12 16 0.14 12 7.2 6.3 1 23 1202 1225 1202 1225 0.97

13 16 0.014 1.2 10.4 1.2 1 20 1253 1273 1253 1274 0.95

14 16 0.15 13 7.1 0.7 1 23 1331 1354 1331 1354 0.93

15 16 0.018 1.6 10.0 0.4 3 23 1401 1421 1399 1421 0.93

16 16 0.0083 0.71 11.1 5.9 1 23 1427 1449 1427 1449 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00011	0.0095	16.9	0.8	1	23	80	102	80	102	0.99
2	16	0.0005	0.042	14.9	0.5	1	23	114	136	114	136	0.98
3	16	0.00023	0.02	16.0	6.2	1	23	142	164	142	164	0.98
4	16	0.35	30	5.9	0.0	1	22	224	246	224	248	0.79
5	16	0.034	2.9	9.1	1.1	2	23	254	276	254	276	0.97
6	16	7.5	6.4e+02	1.8	1.1	1	19	321	339	321	341	0.83
7	16	0.079	6.8	8.0	0.1	1	23	477	499	477	499	0.96
8	16	9e-06	0.00077	20.4	0.8	1	23	508	530	508	530	0.99
9	16	0.00091	0.078	14.1	3.1	1	23	536	559	536	559	0.97
10	16	0.00054	0.046	14.8	3.0	1	23	942	965	942	965	0.97
11	16	0.00061	0.052	14.6	0.5	2	23	1175	1196	1174	1196	0.97
12	16	0.14	12	7.2	6.3	1	23	1202	1225	1202	1225	0.97
13	16	0.014	1.2	10.4	1.2	1	20	1253	1273	1253	1274	0.95
14	16	0.15	13	7.1	0.7	1	23	1331	1354	1331	1354	0.93
15	16	0.018	1.6	10.0	0.4	3	23	1401	1421	1399	1421	0.93
16	16	0.0083	0.71	11.1	5.9	1	23	1427	1449	1427	1449	0.98

Sequence Information

Coding Sequence: ATGCAAGGGGTCGTTTTCATGCCGCAGAATCCACAGCAGGGGTCGCCGCCGCCAAATAACCCTCTAGTTACCGACATTACCATGGAGGTAGAGTCCGATCCAGCGCAGTCAAGTAAAGAGCCGTCGACCAACCAGAGCAGCCATAGCGATTCGGGCATCTTCTCCACAACCAACACCTCCGCCATGGAGACCTGCGACACCGACAACCGCAGCGATTGCAGCTCCCCCGAACGCAAGTACGTCTGTCCAATCTGCGAAACGATGTTGACCTCCCAGCACGAATTCACTCTTCACATCCGATCTCACAACAACGAATCCGAAGTGCAAGACGACAAAGGCTTCACTTGTCGCATTTGCTTCAAGGTGTTGAGCTCCAGTTCGAGTTTGGATCGACACGTTTTGGTCCACAGTGGGGAGAGACCTTTTCATTGTCGCTACTGTGGAGATACTTTCACCACCAatggaaacatgcacagacacATGAGGACCCACACCCACAAGAATGACAATTACGAGTCTGACGCCAGTTCGGATAGCAACGTCAGCGGAAGCTCCAAGAGCACggagtttaataataataaagtggAGTCGAAGAAGAGGAAGTTGGAGGTGACGGATCAGATGAATAAAAGGGTGGAAAACTCtagtgataatgaaggactaCAATTCTACAAGTGTCCAGTGTGCGACAGAACTGATTTTGACTCGATGGTCGCTCTGGAGGCTCATCTGGAAGACAATCATCCGGACTATCCAGCCAAGTGTGGACAGTGCAACCAGCTCTTCCAGAACAACAAGTTGTTGAGTGTCCACCGTAACACCGTCCACAACAACACCAAGAAACACACAGTTTCAGGATTCAAAGACTTGACCTTCGTCGACTTCTCCAGCCAGAAGTTCCCCCACATCGCCCGCTACGAGTGCGAGAAGAACCTCCACACATCCTCAGACGGGTTGAGCTTCCAATGCAAGACCTGTCTCCGAGCCTTCCCTTGCACCAACTCTCTAGAAATTCACGAAAAAGACTGCGCCTTCAACTCCTACCCCAACGGCTTGGACCTCTCTAAAACAACTCAAATCTCCGAAAAGGACATCCGAAGAAACGAGTTCTTCTCGCGACTCAACCTCCAAGATAATTCTCCCGAGAAGTTCATCCCCCCGCCTCAAATCAGCGACACTTCGACTAAATTAAGACAGCAACTCCTCGCTAAAGTGATGACGAACGACTCCAGTAAAGATCTAGCCGACATCCAGTCGATCATCTCGATGACCACGAACGGGAGTCTTCTGCAGCAACTCCAAGCCAAGAGCGACTTGGCGCTCAAGAACAACTTAGAGTCGTCTCAGGAGATCAACCGCTCCGAACAGGAAGAAGAATCTCAAGATTTATTTGCGGTAGAGTTCCGCAAAATGAAATTAAGAGGGGAGTTTCCGTGTCGACTTTGTACTGCAGTTTTCCCAAATTTGAGGGCGCTCAAAGGGCACAATCGCGCCCATCTCAACGGTAACAACAATGGGATGTACAGGTGCAACATGTGTCCGCACTCGTCGATCGACAAGGCGGCGTTGATTAGACACATGAGAACCCATAATGGAGACAGACCCTACGAGTGCTCACTTTGCAACTATGCCTTCACCACCAAAGCCAATTGCGAGAGACACTTGAGGAACAGACATGCCAAAACTACAAGAGAAGAGGTGAAGAAAGCAATAATCTACCATCCGTCGGAGGACCCAACTAACGAAGATCTCAACAAGTTGACTTCGAGAGAAGACGTAAGAAAAGTAAACAACGAATTGAGTCCCGAGAAATTGTGCTCTACACCGAAGCTCTCAGAGTTGAGGAGTATCATACCGGAGATAGTTAAACCGGAAATGACTCCACTGATTCCGAATTTGTTGAAAGAAACTCTCAATGTACCTTTGTCCAAAGAACCCCCAAAGCTATTCTCGAATATTACTGATATTATTCGCAACGAGAATTTGAAATCTCTAAAGGACCACAGGATCCATCAGAACGGTCAGCTCTCTTCGTATCTACCCCCACCTTATAATTTTTCTCCCAAATCATCCAATGTCTCCACTCCACACTGTCCCTCTTCGAAAATCCACGTTAAAAACTTGGAGGAATTAAAAGAGTCAAGTTTCGAACAGTCGGACCAAGAAGGTGAGGAGCAAGACGATGAACCCATGAATCTAGTTTTGGacttgagcaaaaaaaaatacacggatgaaaaaaagcaaaaaagtgAGACACTTCCTGAAGATCTTTCAAATAAGAATCCTCCAAATGCGCTACTGATGAGGGAACTCTTCGCCCAACAACTGTTGAAGAGTCCTCCGAAGCTTGACACTGCAGCTTGGTACGCTAGTCTGTATCGGAATACATTTTCGGGGTTCACTGGTTGGCCTGGATTACCACTCAATCCTCTTCTTTTCCCATCTCTGCAAACTCCTCTTCTGCCGCAAGACTCGCCGGATATGAAGGAGCGGCTGCAGAGATACCAACTTTGCGGGGGCTCCATGATCGCTGACAATTTTGCCgaaagattaaaaaacttcCAAAACCCCGCCAATTCCGTTTTCAGTAACTTCAAAGTCGGTGAGGTCAAGTCTGAAAATGATGTGAAGAAAGAGGAGTTGAAGCCGTTGAGTTTGAACGTGGAGTCGAGCTTTGGAGACAActtcaaattacaaagtcccatccagcaGCAACAAGTCAAGCCAGATTTGAATCAATCTCCCAACTCCGTGAAAATGGTGATCAAAAATGGAGTTCTGATGCCGAAGCAGAAGCAGAGACGGTACAGAACTGAGCGTCCCTTCACCTGCGAGCACTGCTCGGCTCGGTTTACTCTTCGGTCCAACATGGAGAGACACATCAAGCAGCAACACCCCCAGTTCTGGTCGCAGCGCCAAAGAGGCCATCTCACCAATCCAGGGCGGAAGAGCCAAGCGAAGACGAGCTACTGTGATCTCAGTATACCAAACTACGAATTACCAAAGAGTCAAGACTTCGACGATACCAAAGAACACGATAAGTTGAAATTTGCGATCCTGGCGCAACATCTTAGAGTCAACCAAGAGATAAAGAAGGACGAAGACGACGACTGTGCTCTTGTTATCGACGAGAACGCTGAGAAAAGCGAGGCGAAGACTGAAGACAACCAAAGAAGATTCGAGATAGGATACGAGAGGAGCAGGATTTTGGAGGAGAAGTTGAGGGAGCTGCATGCCAAGCAGTCTAAACCGGAGAAGACCAAGAATGAAGAGAATCAAGATTTAGTCCCGGTTTCAAGACTCTTGGATAACGCGTCCCAGCAGCAGTTTAAGGAGTATTTCAAGCGTGAAGGAGAAGAACCGGAAACTGGTGGCGCCAGTGAAGAGGATGAAGAAGGTCTAGTGGCCAGCGGAAGCACAAGTGAAGGGAACATCTCAGGAACAGACGAAAACAAGTCGGAATCAGAAACTGCAGCTCCCGTGAAGAAGAAGTCAGCGTACTCCATGGCCCCCAACAGAGTCAGCTGTCCCTTCTGCAGCCGAAAATTCCCCTGGAGCTCGTCTCTGCGCCGTCACATCTTGACCCACACGGGACAGAAGCCCTTCAAGTGCAGCCACTGTCCCCTTCTGTTCACCACGAAGTCTAACTGCGACCGTCACTTGCTCAGGAAACATGGCAACAACGCCACTACCATCACCAATGACGCCGTCAATAACAATACCAACTACTTGATGCGCAACGTCCCCGAGAGACCTTTCAAGTGTTCCAACTGCCCCAGCAGTACTTTTTCCACCTACTCCAACCTGAAGAAGCACATCAGCTGCAAACACTCCACCAACGCGCAAGGCGATGACATCAAAGCGCAGGGCTACGAAGCCGGCAGCTCCGAAGACGAAAAACTCCCCTCCAACGATCACAAGAGCGACTGGGAGGGCCCCGCCAAATCAATCCCCGACGTTCAGAGCGTGGTTCAGAATTCCGATCTCCCCTTCAAGTGTCATCTCTGCGATGGTTCTTTCGCCGAGCGCCAAGAAGCGCTCGACCACATCAAAGACAAGCACTTCGCCGAGTACGACTTGTTGATGTCAAAGAATGCGCTTGACAACAGCGCCACGACTCCCGAAGACGGCGTCCACCACGAAGACGAGGAGAACGACATGAGGGGCAAGTTCCCCGATTACTCTAACAGGAAGGTGATCTGTGCTTTCTGCATGCGCAGATTCTGGTCAGCTGAAGATTTGAGGAGACACATGCGAACTCACACCGGCGAGAGGCCCTTCAGCTGCGATATCTGCAGGAGGAGATTCACGCTGAAGCACAGCATGTTGCGTCACCGGAAGAAGCACAACGTCAATTTTGACAGCGAAGTGGTCAACAGCGACGAGGACAACAACCCTAACTTTGAGAAATTTCCAAAGAGCGAGAATAATAACGTGCAGAGGGAGCGGACGGAGGAATCGGACGGGAACGAGGGGAGCGACTTGATCAGCAATCTGCTGGGAATTAGAGACAGAGCCTTCTTCGACAAAGTTCTGACGGCATCTGCAGACGACGCTGCCAAGCTACTAGGGGTGAAGAACGGGGTAAGAGAATAA
Protein Sequence: MQGVVFMPQNPQQGSPPPNNPLVTDITMEVESDPAQSSKEPSTNQSSHSDSGIFSTTNTSAMETCDTDNRSDCSSPERKYVCPICETMLTSQHEFTLHIRSHNNESEVQDDKGFTCRICFKVLSSSSSLDRHVLVHSGERPFHCRYCGDTFTTNGNMHRHMRTHTHKNDNYESDASSDSNVSGSSKSTEFNNNKVESKKRKLEVTDQMNKRVENSSDNEGLQFYKCPVCDRTDFDSMVALEAHLEDNHPDYPAKCGQCNQLFQNNKLLSVHRNTVHNNTKKHTVSGFKDLTFVDFSSQKFPHIARYECEKNLHTSSDGLSFQCKTCLRAFPCTNSLEIHEKDCAFNSYPNGLDLSKTTQISEKDIRRNEFFSRLNLQDNSPEKFIPPPQISDTSTKLRQQLLAKVMTNDSSKDLADIQSIISMTTNGSLLQQLQAKSDLALKNNLESSQEINRSEQEEESQDLFAVEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRAHLNGNNNGMYRCNMCPHSSIDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKTTREEVKKAIIYHPSEDPTNEDLNKLTSREDVRKVNNELSPEKLCSTPKLSELRSIIPEIVKPEMTPLIPNLLKETLNVPLSKEPPKLFSNITDIIRNENLKSLKDHRIHQNGQLSSYLPPPYNFSPKSSNVSTPHCPSSKIHVKNLEELKESSFEQSDQEGEEQDDEPMNLVLDLSKKKYTDEKKQKSETLPEDLSNKNPPNALLMRELFAQQLLKSPPKLDTAAWYASLYRNTFSGFTGWPGLPLNPLLFPSLQTPLLPQDSPDMKERLQRYQLCGGSMIADNFAERLKNFQNPANSVFSNFKVGEVKSENDVKKEELKPLSLNVESSFGDNFKLQSPIQQQQVKPDLNQSPNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQFWSQRQRGHLTNPGRKSQAKTSYCDLSIPNYELPKSQDFDDTKEHDKLKFAILAQHLRVNQEIKKDEDDDCALVIDENAEKSEAKTEDNQRRFEIGYERSRILEEKLRELHAKQSKPEKTKNEENQDLVPVSRLLDNASQQQFKEYFKREGEEPETGGASEEDEEGLVASGSTSEGNISGTDENKSESETAAPVKKKSAYSMAPNRVSCPFCSRKFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNNATTITNDAVNNNTNYLMRNVPERPFKCSNCPSSTFSTYSNLKKHISCKHSTNAQGDDIKAQGYEAGSSEDEKLPSNDHKSDWEGPAKSIPDVQSVVQNSDLPFKCHLCDGSFAERQEALDHIKDKHFAEYDLLMSKNALDNSATTPEDGVHHEDEENDMRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHNVNFDSEVVNSDEDNNPNFEKFPKSENNNVQRERTEESDGNEGSDLISNLLGIRDRAFFDKVLTASADDAAKLLGVKNGVRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01568293;
90% Identity: -
80% Identity: -