Basic Information

Insect: Tenebrio molitor
Gene Symbol: -
Assembly: GCA_963966145.1
Location: OZ014543.1:5785638-5788361[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.002 0.17 13.0 0.1 2 19 203 220 202 223 0.93

2 10 0.053 4.5 8.5 1.4 1 23 236 258 236 258 0.98

3 10 0.00061 0.052 14.6 2.8 3 23 290 311 288 312 0.90

4 10 0.44 38 5.6 0.1 1 19 367 385 367 388 0.79

5 10 0.00011 0.0093 17.0 4.6 3 23 416 436 414 436 0.97

6 10 5.7e-06 0.00049 21.0 1.3 1 23 442 464 442 464 0.98

7 10 1.2e-06 0.00011 23.1 1.2 1 23 470 493 470 493 0.96

8 10 1e-07 8.8e-06 26.5 0.7 1 23 499 521 499 521 0.99

9 10 1.5e-05 0.0013 19.7 2.0 1 23 527 549 527 549 0.99

10 10 6.6e-07 5.6e-05 23.9 1.6 1 23 555 577 555 577 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.002	0.17	13.0	0.1	2	19	203	220	202	223	0.93
2	10	0.053	4.5	8.5	1.4	1	23	236	258	236	258	0.98
3	10	0.00061	0.052	14.6	2.8	3	23	290	311	288	312	0.90
4	10	0.44	38	5.6	0.1	1	19	367	385	367	388	0.79
5	10	0.00011	0.0093	17.0	4.6	3	23	416	436	414	436	0.97
6	10	5.7e-06	0.00049	21.0	1.3	1	23	442	464	442	464	0.98
7	10	1.2e-06	0.00011	23.1	1.2	1	23	470	493	470	493	0.96
8	10	1e-07	8.8e-06	26.5	0.7	1	23	499	521	499	521	0.99
9	10	1.5e-05	0.0013	19.7	2.0	1	23	527	549	527	549	0.99
10	10	6.6e-07	5.6e-05	23.9	1.6	1	23	555	577	555	577	0.98

Sequence Information

Coding Sequence: ATGGAAAATGCGGAATCGGGTCCCGAACTGTTGGAAAACGTTGTGATCAACGACGTGCCTACTCCGCAGTACATGATCCAAAGACTGCCCGAGAATTCGCAACTGTTAGGAACGGAATTGTTGCAGCACCACAATGGGCTCGTGGTGGACCTCGCGGCGACCGATTTCATCCCGGTTCCGTACGCCTCCGAAGCCCTGTTGTCGCAGGATTTGACCGAGGAAGACAGAAATTTAGCGGCGGCTCTGGTGGCGGTGCAGCTGAGCCAACAGCAGCTTCACGAAGCGTCTTTGCCGTCGTTGGTGCAAAACGCAGGTTTAGAAAATAAGATTCTGGAAGAGCAGCAACTCATACTGACTGACAAAGAAGCGACTATCAACAATGGCTACTTGCAAATAGTGGGTTCTGAAAATATCTATGTTGAGAAACAAGCTGTCACTAAAATGATCAACAATCGGTACGTGAACGTGACGCAAAGTTTCGCCACGTCGGAGAAGTCCGAGGACGAAAAGCGAGGCTCCGACGGGGACCAGAGGACCTCCCGGAAAAGTCTTCCTCACAAGAAACGCATCTCTCGCAAGCTTAAGAAACAGAACGTCATCAAAATCCAGTGCAATCTGTGTGAACAGACATTCACATCGAGCGACGACTTTGCTCAACACGAAATTTTATGCCAAACCACCATCACACCAGTTCACAACACGGCCTTCTCTTGTCAGATATGCAACGCCAATTTCCAGGACCAACTGCGATTTTTCGAACACCTCAAGTCTCACTATGAACCCAACCACGTGACGCCCTCTCAAGTCGAGAAGGTCGAAGTGGACACGGAAAAAGACAACATCTTCTCCACCCTCCTCAACCTCACGTGCATCCAGTGCAACAAGACATTCCGGCGGCAGAAAGCTTTTGAAACGCACATGAAGGAGATACACCACAAAGAGGAACTGAACGAGTTCAGCGAGACGGAAGATTTGATGGAGGGGATCAACGTGGTCGTGGACCACGACGCAAACTCGGATAACGACACCAAAGCATGGTATCGAGAAGACGAACTGCACCAGACCGAAGAGGATCTGAAGGAGTTGGAAGCAGAAGAGCACGTCTGCCACATCTGCAAGCAACCCTTTCCTTTGAGGGCCATCTTGTTGCAACATTTGGTGACTTGCAGAGCCGACACCGGAAATACAGAGCCCACAGCGCCCTCTCTGGTCAAgcgtaaaaacaaaaagaaaggGACTATGCACTGTAGAGAATGTGATAGGGTGTTCACCCACAGGAACTCTCTCGTGTACCACATGAGGAGCCACAGCGGGATCCGACCCCACCAATGTGACCAATGCGGCAAAAGTTTCTTCGCATCCAGCGCCCTCAAAGTCCACTTGCGGCTGCATTCAGGAGACAAGCCCTACCACTGCGAGGAATGCGGCAAGGACTTTCGCCAATGGGGCGACTTAAAATACCACATGACCTCTCTACATTCGAACGAAAAACAGTTTCAGTGTGAATACTGCGGTAAGGACTTCGCCAGGAAGTACTCGTTGATCGTTCACCGCCGGATCCACACTGGAGAGAAAAATTACAAGTGCGAGTTCTGCGCGAAGACCTTCAGGGCGTCGTCGTACTTACAAAACCACAGAAGGATTCACACGGGTGAGAAGCCTCACGAATGTGGGATTTGCGGCAAGCCGTTTAGAGTCAGGTCAGACATGAAACGTCACCAGAAAACACACTCGAAACGGACAGTTTCCGGGAAACCCCTGAGATACACGACACCAGTGCAATCTACTGAAAAAGTGATTAAAACGGAAAACGGAAGTAACTTGTCTGAAGACGTTTACGAATTGAAACTGAACGTCGAAGAAGCCGACAATCCGGCATCAGGTCACATTTTAGGTTATGATCAAGACCAGATGGAAACGGTTAGAGATGGAGGCACCTTGTATCAAGGACAACAGTTACTTTTAGTTAGTTATTCCACGGATATTCCCATCAGAAGTGTGGATTCATCCTCAACATGGATTCAAACCGGTTCTTGA
Protein Sequence: MENAESGPELLENVVINDVPTPQYMIQRLPENSQLLGTELLQHHNGLVVDLAATDFIPVPYASEALLSQDLTEEDRNLAAALVAVQLSQQQLHEASLPSLVQNAGLENKILEEQQLILTDKEATINNGYLQIVGSENIYVEKQAVTKMINNRYVNVTQSFATSEKSEDEKRGSDGDQRTSRKSLPHKKRISRKLKKQNVIKIQCNLCEQTFTSSDDFAQHEILCQTTITPVHNTAFSCQICNANFQDQLRFFEHLKSHYEPNHVTPSQVEKVEVDTEKDNIFSTLLNLTCIQCNKTFRRQKAFETHMKEIHHKEELNEFSETEDLMEGINVVVDHDANSDNDTKAWYREDELHQTEEDLKELEAEEHVCHICKQPFPLRAILLQHLVTCRADTGNTEPTAPSLVKRKNKKKGTMHCRECDRVFTHRNSLVYHMRSHSGIRPHQCDQCGKSFFASSALKVHLRLHSGDKPYHCEECGKDFRQWGDLKYHMTSLHSNEKQFQCEYCGKDFARKYSLIVHRRIHTGEKNYKCEFCAKTFRASSYLQNHRRIHTGEKPHECGICGKPFRVRSDMKRHQKTHSKRTVSGKPLRYTTPVQSTEKVIKTENGSNLSEDVYELKLNVEEADNPASGHILGYDQDQMETVRDGGTLYQGQQLLLVSYSTDIPIRSVDSSSTWIQTGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01480330; iTF_00639750; iTF_01481124; iTF_00167814; iTF_00870792; iTF_00415340; iTF_00753213;
90% Identity: -
80% Identity: -