Basic Information

Insect: Tenebrio molitor
Gene Symbol: -
Assembly: GCA_963966145.1
Location: OZ014542.1:7194673-7196756[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00015 0.013 16.6 3.0 1 23 131 153 131 153 0.98

2 11 1.3e-05 0.0011 19.9 4.2 1 23 159 181 159 181 0.99

3 11 0.0062 0.53 11.5 3.1 1 23 189 211 189 211 0.96

4 11 0.001 0.087 13.9 2.2 1 23 217 239 217 239 0.98

5 11 0.00051 0.044 14.9 1.1 1 23 248 270 248 270 0.97

6 11 9.9e-06 0.00085 20.2 2.2 3 23 278 298 276 298 0.96

7 11 3.8e-05 0.0032 18.4 0.7 1 23 304 326 304 326 0.98

8 11 4.8e-08 4.1e-06 27.5 1.8 1 23 332 354 332 354 0.99

9 11 0.00013 0.011 16.8 0.4 3 23 362 382 361 382 0.99

10 11 0.0017 0.14 13.2 2.6 1 23 388 410 388 410 0.94

11 11 7.1e-08 6e-06 27.0 0.7 1 23 416 438 416 438 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00015	0.013	16.6	3.0	1	23	131	153	131	153	0.98
2	11	1.3e-05	0.0011	19.9	4.2	1	23	159	181	159	181	0.99
3	11	0.0062	0.53	11.5	3.1	1	23	189	211	189	211	0.96
4	11	0.001	0.087	13.9	2.2	1	23	217	239	217	239	0.98
5	11	0.00051	0.044	14.9	1.1	1	23	248	270	248	270	0.97
6	11	9.9e-06	0.00085	20.2	2.2	3	23	278	298	276	298	0.96
7	11	3.8e-05	0.0032	18.4	0.7	1	23	304	326	304	326	0.98
8	11	4.8e-08	4.1e-06	27.5	1.8	1	23	332	354	332	354	0.99
9	11	0.00013	0.011	16.8	0.4	3	23	362	382	361	382	0.99
10	11	0.0017	0.14	13.2	2.6	1	23	388	410	388	410	0.94
11	11	7.1e-08	6e-06	27.0	0.7	1	23	416	438	416	438	0.99

Sequence Information

Coding Sequence: ATGaccgaaaataattttgaaaaggttTGTCGTATTTGCATCAAAGAAGCGAGTGAGAGTGTACATTTATTTGATACAAAACTATCAGACAGTGGCACTTTTGTTGTTGATTTTTTACGTCAAATCACAAACTTGGAGATTTTAGAAACAGACGGtttgtcaaatattttgtgCATTGCATGTCTTCAAAAACTATGTAACGCATTCGAATTGGTTCAGATGTGTATTTCTTCAGACATCATCTTGAGGAACACTGCCAAAGATGAGTTTACTGAAATCTTAGAGATAAACTGTGACTCAAAAGATCAAAACGATGACTCGTTAAAATCAGAAGAGAGCGTTACAGAGGATGAACCAGAAGAAAACACAAATTTGCCAAAAAGTGTTAAATATGCATGTGACATttgcaacatattttttaataacaaaactaAATATAATAAACACAAAAAGACACATGATGATAGCAATCCATTCAAATGCAATGAATGTTCACAgacgttttcaaaaaaattgcatctaAATGTTCATCTAAGATCACACACTAAAGATGAAGATAAAAAGTTTATCTGCAAAAGTTGTAATAAGCAGTTTATGTATGAATATCAGTTAAAACAACATGAGTACAAACACACAGATGAAAAACCTTATCCATGCAAGTTTTGCAGCAAAGGATGTCTCACTGCTGAAAGTCTGAAAAGACACATGAAGATACATGACAAGAATTATGTTAAAAAGAAACATTCttgtcaaatttgttttcaGGAGTTTGCATATCCCAGTTTTTTAGCAGAGCATATGAAAAATCACACTGGAGAAAAACCACATTTGTGTTCAATTTGTGGCAAGGGTTTCCGCCAAAGCGGTGCTCTACACTACCACCAAAGAGTACACACGGGTTACAAGCCatttgtttgtaaaatttgcaaCGGAAATTTCATGTCTCAAAGTGTCTTAAAAGTTCATATGAGAAAACATACAAATGAAAGGCCTTATGTGTGTCACATCTGTGGAATGGCATTTAGGCAGTCCACAGATTTAAAGAGCCACCAAAGAACCCACACTGGGGACAAACCAGTTTTATGTACAATATGCGGAAAGCGCATGTCAACTACAGGTCAGTTAACTATTCACATAAGATCTCATACTGGAGAAAAACCATTTGCGTGTTCTTGTTGCTCTAAAGCCTTCACAACCAAGACGATGTTGGTGAAACATGAACGAATCCACACGGGCGAGCGACCCTACGTGTGTGACATTTGCGGTAGAGCCTTCAATCAAAGCAGTACCTTGAGAACACATCGAAACACTCATCAAAACAACAAGAAGAGAAAGAAAAGTGAAAGGCAGAAAGAAAAATCGAGCACAAATGAAGTTAGTGTAGAAAAAGACTACACTAGCGCCAGTTGTGTTATATACAAAAATGATATTGTCAACCTGGGAACTGAGATTGTTGCTGAGGAGTTCATGAGTGATAGTGTACAAGACATTGAAGTTAAGAGTACTGACGGGAGTGTAAAGACACAATTCACAGTTATTTTGCCAGCACCTATACCGCTCTTACAAAATCTCTAA
Protein Sequence: MTENNFEKVCRICIKEASESVHLFDTKLSDSGTFVVDFLRQITNLEILETDGLSNILCIACLQKLCNAFELVQMCISSDIILRNTAKDEFTEILEINCDSKDQNDDSLKSEESVTEDEPEENTNLPKSVKYACDICNIFFNNKTKYNKHKKTHDDSNPFKCNECSQTFSKKLHLNVHLRSHTKDEDKKFICKSCNKQFMYEYQLKQHEYKHTDEKPYPCKFCSKGCLTAESLKRHMKIHDKNYVKKKHSCQICFQEFAYPSFLAEHMKNHTGEKPHLCSICGKGFRQSGALHYHQRVHTGYKPFVCKICNGNFMSQSVLKVHMRKHTNERPYVCHICGMAFRQSTDLKSHQRTHTGDKPVLCTICGKRMSTTGQLTIHIRSHTGEKPFACSCCSKAFTTKTMLVKHERIHTGERPYVCDICGRAFNQSSTLRTHRNTHQNNKKRKKSERQKEKSSTNEVSVEKDYTSASCVIYKNDIVNLGTEIVAEEFMSDSVQDIEVKSTDGSVKTQFTVILPAPIPLLQNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00167799;
90% Identity: -
80% Identity: -