Basic Information

Insect: Tenebrio molitor
Gene Symbol: -
Assembly: GCA_963966145.1
Location: OZ014539.1:1645212-1647519[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0086 0.73 11.0 3.7 3 23 51 72 50 72 0.95

2 18 0.00018 0.016 16.3 0.8 2 23 89 111 88 111 0.91

3 18 5.7e-05 0.0048 17.9 1.4 1 23 129 152 129 152 0.93

4 18 3.4e-06 0.00029 21.7 1.6 1 23 186 208 186 208 0.98

5 18 5.3e-06 0.00046 21.1 1.6 1 23 214 237 214 237 0.92

6 18 0.002 0.17 13.0 0.5 1 23 243 265 243 265 0.97

7 18 2.4e-05 0.0021 19.0 4.4 1 23 271 293 271 293 0.96

8 18 2e-05 0.0017 19.3 0.7 1 19 299 317 299 318 0.97

9 18 0.00081 0.069 14.2 5.9 1 23 327 349 327 349 0.96

10 18 0.59 50 5.2 0.6 2 13 356 367 355 373 0.87

11 18 0.00012 0.01 16.8 0.6 2 23 404 425 404 425 0.98

12 18 0.055 4.7 8.5 1.3 3 23 464 486 463 486 0.92

13 18 4.2e-05 0.0036 18.3 0.5 3 23 494 514 492 514 0.97

14 18 9.3e-06 0.00079 20.3 0.8 2 23 519 540 518 540 0.96

15 18 0.23 19 6.5 4.5 1 23 546 568 546 568 0.94

16 18 0.00012 0.01 16.8 0.5 1 23 574 596 574 596 0.97

17 18 0.0049 0.42 11.8 1.2 1 23 602 625 602 625 0.97

18 18 0.32 27 6.1 0.1 2 19 627 644 627 649 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0086	0.73	11.0	3.7	3	23	51	72	50	72	0.95
2	18	0.00018	0.016	16.3	0.8	2	23	89	111	88	111	0.91
3	18	5.7e-05	0.0048	17.9	1.4	1	23	129	152	129	152	0.93
4	18	3.4e-06	0.00029	21.7	1.6	1	23	186	208	186	208	0.98
5	18	5.3e-06	0.00046	21.1	1.6	1	23	214	237	214	237	0.92
6	18	0.002	0.17	13.0	0.5	1	23	243	265	243	265	0.97
7	18	2.4e-05	0.0021	19.0	4.4	1	23	271	293	271	293	0.96
8	18	2e-05	0.0017	19.3	0.7	1	19	299	317	299	318	0.97
9	18	0.00081	0.069	14.2	5.9	1	23	327	349	327	349	0.96
10	18	0.59	50	5.2	0.6	2	13	356	367	355	373	0.87
11	18	0.00012	0.01	16.8	0.6	2	23	404	425	404	425	0.98
12	18	0.055	4.7	8.5	1.3	3	23	464	486	463	486	0.92
13	18	4.2e-05	0.0036	18.3	0.5	3	23	494	514	492	514	0.97
14	18	9.3e-06	0.00079	20.3	0.8	2	23	519	540	518	540	0.96
15	18	0.23	19	6.5	4.5	1	23	546	568	546	568	0.94
16	18	0.00012	0.01	16.8	0.5	1	23	574	596	574	596	0.97
17	18	0.0049	0.42	11.8	1.2	1	23	602	625	602	625	0.97
18	18	0.32	27	6.1	0.1	2	19	627	644	627	649	0.94

Sequence Information

Coding Sequence: ATGATGGTGGCGAAAAGAGTTCGAATCATCGTAGCCAGCACCCGATTCCTCACCCCTCGTCACGTGCAATACAAGCCCTCCTTTTCGCCCCTGCGGAGCGACGAGAACAAGAAACCGGAGGCGCGCCCGCAAGCAGACCCCAAAGGCTTCTGTGATATCTGTAAAAAAACTCTGAGCAGAGTGCGCGACTTGAAGCGCCACAAAATCAGTTGCCATCCAGAAGCGGCGCCAAAATTCGATCAGGTCGCCGATTTGGCGACGAAATCTTGCACGGAATGCGACCTGACGTTCGACACTCGCACCCAGTTGAAAAAGCACGCCGAGCAGGTGCACCGAGCCAAGCAGAAGCGACACCGTCGTAAAAACAACGAAATCGTGGCACAGTTCTTTTGCGACGTCTGCGACAAAGGCTTCACGCGGAAGTACGACATGGAAAAGCACAAGGTGCGCATGCACTCCGACCAGGTGGTCCGGCAGGAAGAGCGCAGCTCGCGACGGAGCAACCTGGAGGTGCTGGCGCGGTGTCGCGGGCGCGGCCCCGACGGCAAACCCTTCTACAGGTGCGACTTCTGCCAACGGGTCTTCGCCCAGTCGTACAACTTGATGCGCCACAGAACGATACACACGGGGGTCAGAGCGTACTTCTGCCACATCTGCGGCAAGAGCTTCAGGATGTCGAACGGGCTGACGCGGCACATCGACGCCTTCCACAACGGAGTGAAGAACTTCAGCTGCGAAGTCTGCAAGAAGACGTTCACGGCGAGGGCGACGCGCGACGAACACATGAACATCCACACCAACAACAGGCCTTTCGTGTGCGACGTCTGCGGCAAGTGCTTCAAGCAAAAGGCGTCGCTGCACGTCCACAAGATGTTCCACTCGGACCTGTACAGGTTCCAGTGCAGCAACTGCGGCAAGAAGTTCAGGAGGGCGCAGGACTTGAAGGTGCACAGCTGGCTGCACACGGGGCACAGACCGCACGCCTGCCACAAGTGCAAGGCCGCCTTCAGGCTGAGGCACGACCTCACGAGGCACCTCAGGATACACGAGAAGATGAGCGAGTGCGTCTGCAACGAGTGCGGCTCGGTCTTCAGCCAGGAGAGATCGAACCCGGCCCACGGTAATATATTGGCGCTGTTCGAACAAATCACCCAAGACAAGGAAGATAAGGCGGTGGTGGAAGAAGCGCAAACCGCGACCGAAAACCCCACCTGCGAAATCTGCGAAAAATCTCTCAGCTCCAGAGCGAACTACCTCAGCCACCTCAAGACCCACATCTCCGACAACTTCTGTCCCATCTGCTGCAACAGCTACAACACCAAATTCAAACTCGACACTCACTTGACCTGCCACGAGCCCTCCCCGAACCCGTCCCAGACGTACGTCGCGTGCGACTTTGCCAACTGCGACCGCCAGTTCCCCTCCAAACTGCAACTCCACAACCACAAAAACGAGCACTCGAACTCGTCCAGGTTCGGGTGCGACGTCTGCGGGACGAAGTTCTCCAGGAAGGCGGCTCTGGAGAACCACAAGAGCCGGCACGACAGGCCGTCGGTGTGCCAGGTCTGCGACAAGACGTTCGCGAACAAGAAGACGCTGAAGGAGCACGAGCGGCTGCACTCGGGGGAAAAACCGTACGAGTGCGGCCAGTGCGACAGAAAGTTTCGCTGCCACAGCGGGCTGAAGTACCACGAGGTCAGCCACACGAACGACAGGAAGTACGAGTGTCGGCCGTGCGGGGTCAGCTTCGCCAGGTCGAACTACCTGAAGGAGCACCTGCGGAGGCACTCGAACGAGAAGCCCTTCCAGTGCCGACGCTGCCCCGAGAAGTTTATCCAGCTGAACGTGCTGAGGAGGCACGAGAGCACCAAGCATCGCAAGTGCGACGTCTGCGAGGAGGTGGTGGGGAGGGCGAAGGAGCTGCGGGAGCACAAATGGAAGCAACACGGCTTTTCCTAA
Protein Sequence: MMVAKRVRIIVASTRFLTPRHVQYKPSFSPLRSDENKKPEARPQADPKGFCDICKKTLSRVRDLKRHKISCHPEAAPKFDQVADLATKSCTECDLTFDTRTQLKKHAEQVHRAKQKRHRRKNNEIVAQFFCDVCDKGFTRKYDMEKHKVRMHSDQVVRQEERSSRRSNLEVLARCRGRGPDGKPFYRCDFCQRVFAQSYNLMRHRTIHTGVRAYFCHICGKSFRMSNGLTRHIDAFHNGVKNFSCEVCKKTFTARATRDEHMNIHTNNRPFVCDVCGKCFKQKASLHVHKMFHSDLYRFQCSNCGKKFRRAQDLKVHSWLHTGHRPHACHKCKAAFRLRHDLTRHLRIHEKMSECVCNECGSVFSQERSNPAHGNILALFEQITQDKEDKAVVEEAQTATENPTCEICEKSLSSRANYLSHLKTHISDNFCPICCNSYNTKFKLDTHLTCHEPSPNPSQTYVACDFANCDRQFPSKLQLHNHKNEHSNSSRFGCDVCGTKFSRKAALENHKSRHDRPSVCQVCDKTFANKKTLKEHERLHSGEKPYECGQCDRKFRCHSGLKYHEVSHTNDRKYECRPCGVSFARSNYLKEHLRRHSNEKPFQCRRCPEKFIQLNVLRRHESTKHRKCDVCEEVVGRAKELREHKWKQHGFS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -