Basic Information

Insect: Tenebrio molitor
Gene Symbol: -
Assembly: GCA_963966145.1
Location: OZ014546.1:5291582-5298525[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.014 1.2 10.4 1.0 1 23 82 104 82 104 0.98

2 16 0.0025 0.21 12.7 2.1 2 23 110 131 110 131 0.98

3 16 7.8e-07 6.7e-05 23.7 1.2 1 23 137 159 137 159 0.99

4 16 1e-05 0.00088 20.2 1.6 1 23 165 187 165 187 0.97

5 16 0.023 1.9 9.7 2.4 1 23 193 215 193 215 0.98

6 16 0.00015 0.013 16.5 3.0 2 23 222 243 221 243 0.97

7 16 3e-06 0.00026 21.9 0.6 1 23 248 271 248 271 0.98

8 16 0.0011 0.096 13.8 0.3 2 23 275 296 275 296 0.97

9 16 3.3e-05 0.0028 18.6 3.2 3 23 304 325 303 325 0.96

10 16 8.8e-06 0.00075 20.4 1.2 1 23 332 354 332 354 0.98

11 16 6e-06 0.00051 20.9 2.9 1 23 358 380 358 380 0.98

12 16 1.7e-06 0.00014 22.7 3.2 1 23 386 408 386 408 0.98

13 16 0.0064 0.54 11.4 3.2 1 23 414 436 414 436 0.96

14 16 8.7e-05 0.0074 17.3 1.5 1 23 442 464 442 464 0.98

15 16 0.0033 0.28 12.3 6.6 1 21 470 490 470 494 0.91

16 16 0.0053 0.45 11.7 1.6 2 23 503 525 502 525 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.014	1.2	10.4	1.0	1	23	82	104	82	104	0.98
2	16	0.0025	0.21	12.7	2.1	2	23	110	131	110	131	0.98
3	16	7.8e-07	6.7e-05	23.7	1.2	1	23	137	159	137	159	0.99
4	16	1e-05	0.00088	20.2	1.6	1	23	165	187	165	187	0.97
5	16	0.023	1.9	9.7	2.4	1	23	193	215	193	215	0.98
6	16	0.00015	0.013	16.5	3.0	2	23	222	243	221	243	0.97
7	16	3e-06	0.00026	21.9	0.6	1	23	248	271	248	271	0.98
8	16	0.0011	0.096	13.8	0.3	2	23	275	296	275	296	0.97
9	16	3.3e-05	0.0028	18.6	3.2	3	23	304	325	303	325	0.96
10	16	8.8e-06	0.00075	20.4	1.2	1	23	332	354	332	354	0.98
11	16	6e-06	0.00051	20.9	2.9	1	23	358	380	358	380	0.98
12	16	1.7e-06	0.00014	22.7	3.2	1	23	386	408	386	408	0.98
13	16	0.0064	0.54	11.4	3.2	1	23	414	436	414	436	0.96
14	16	8.7e-05	0.0074	17.3	1.5	1	23	442	464	442	464	0.98
15	16	0.0033	0.28	12.3	6.6	1	21	470	490	470	494	0.91
16	16	0.0053	0.45	11.7	1.6	2	23	503	525	502	525	0.96

Sequence Information

Coding Sequence: ATGGAAGAGTGCACGACCTCGCGAAGTACACACGGAATCAACATCTGTGACATAATGACGAAAAATTCGGTTTTCGAGGGTTCCTTCACTGAAAATGTCCGCGTCAAGCAAGAACACGACCATTTTTCTAGTCCGGTGGCCGAGTCTGGTGAGAATCTCGATTTTAAGTTGGTCAAGTGCGAGGGGTACCCTCCAAGTCAGGAGCTGGCCTCGAGGGATGAAGCAGACAACGAAACGACAGCATACAAGTGTGGGATATGTTCCGAGGGGTTCAAGATTTTCGCCGAGTACCGGACCCACAAGAAGCAGCATTTCATCGACAAACGAACGTGTAAAGTGTGTCAAACTGTGTGCCAAAGTATTAGCAAATTGGAAATTCACATGAATACTCATTTGGGATTGAAGCCCTACAAGTGTACAGTATGCGGGAAAAATTTCGTATCGAATAATCAGCTGAAATTGCATGAGAGGAGTCATTCTGATGAAAAGAGGTATGCTTGCAAGAAGTGTTCCAAAGCGTTTCGACATTTGGGATCACTCAGGAGTCACATGGTCATACACAATAACATAAAAGAGTTCCAGTGCAAGAACTGCGGCGAGACCTGCCTAAACTTGCAAGCCTACCGCAAACACCTAGAAAGCCACGGCCAACGAATCGAAATAAAATGCGAACTGTGCAACAAGCAGTTCTCGACGGACCGCCACCTGCAGACCCACCTAAGTTCCCACACCGAGCTGCAATACCCCTGCGAATACTGCGGCCGAATATACTCTTCCCTGTACCGGCTGAAACGGCACATCAAGAGGGCGCACATCCCCAACGTGTGCGACGAATGCGACGCCATCTTCTACGACAGAGCCATGTACACCAAACACAGGAAACAGCACAACGAAGGCAAGCCGGTGTTCTGCACCCACTGCGGCAAAACATTCGACAAGCAGAAGAACCTGAGCGAGCACGTCAGGCTGCAGCACAAGGAAGACGGCAACATCCACAAGTGCGACCTCTGCGACAAGACCTTCATCAACGGGCCTCTCCTCAGGAACCACATCAAGACCCACGACAAATGCTTCAAGTGCAAATACTGCAGCAAGCTGTTCAGCTCGAGGTACAACCTGGAGACGCACCTGGTGACCCACACCGGCGAGAGGAACCACAAGTGCGACGTCTGCGGCAAGAACTACTCGACGAAGAGCAGCCTGAAGAACCACAAGGCGACCCACAGTGACGCCAAGAACTTCAAGTGCGATCAGTGCCCGAAACTGTTCAAGACCAACAGGAGACTGTACGTGCACAAGTTTTCGCACGCGACCGAAGAGAAGTTCCAGTGCGACATTTGCAGTGCTCGATTTCGAGTCAAACAATATTTAAAGTATCACATGATCAAGCATTCGACGACGAAGCCGTACGAGTGCAAGGTGTGCAAGAAGAAGTTCAAGCACAAGAAGTCGTGGGAGAAGCACTCCAATCACGACAAGCACGCCATCATCAAGAAAGAGGCGCAGCAGTGCGGCTTCTGTACCGAGGTGTGCACCACCAAAACTGATCTCTTAGAGCACGTTAGGCTGTTTCATCCGAGCGAAGCTCCCATCGAATCCTCTTTCGACAGCCAGGCTGTAGAAATGTACATTAAAAAAGAGGCAAACCCGTAA
Protein Sequence: MEECTTSRSTHGINICDIMTKNSVFEGSFTENVRVKQEHDHFSSPVAESGENLDFKLVKCEGYPPSQELASRDEADNETTAYKCGICSEGFKIFAEYRTHKKQHFIDKRTCKVCQTVCQSISKLEIHMNTHLGLKPYKCTVCGKNFVSNNQLKLHERSHSDEKRYACKKCSKAFRHLGSLRSHMVIHNNIKEFQCKNCGETCLNLQAYRKHLESHGQRIEIKCELCNKQFSTDRHLQTHLSSHTELQYPCEYCGRIYSSLYRLKRHIKRAHIPNVCDECDAIFYDRAMYTKHRKQHNEGKPVFCTHCGKTFDKQKNLSEHVRLQHKEDGNIHKCDLCDKTFINGPLLRNHIKTHDKCFKCKYCSKLFSSRYNLETHLVTHTGERNHKCDVCGKNYSTKSSLKNHKATHSDAKNFKCDQCPKLFKTNRRLYVHKFSHATEEKFQCDICSARFRVKQYLKYHMIKHSTTKPYECKVCKKKFKHKKSWEKHSNHDKHAIIKKEAQQCGFCTEVCTTKTDLLEHVRLFHPSEAPIESSFDSQAVEMYIKKEANP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -