Basic Information

Insect: Tenebrio molitor
Gene Symbol: -
Assembly: GCA_963966145.1
Location: OZ014538.1:815202-817247[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 5.3e-06 0.00045 21.1 1.5 1 23 81 103 81 103 0.97

2 17 0.04 3.4 8.9 0.2 1 23 108 131 108 131 0.91

3 17 0.0014 0.12 13.4 10.1 1 23 136 158 136 158 0.97

4 17 5e-05 0.0042 18.0 4.8 1 23 167 189 167 189 0.99

5 17 5.1e-07 4.3e-05 24.3 1.1 1 23 196 218 196 218 0.98

6 17 2.2e-05 0.0019 19.2 0.9 1 23 224 246 224 246 0.98

7 17 1.3e-06 0.00011 23.0 2.1 1 23 252 274 252 274 0.98

8 17 0.049 4.2 8.6 2.4 1 19 280 298 280 301 0.94

9 17 0.00031 0.026 15.5 3.0 3 23 317 337 315 337 0.96

10 17 2e-05 0.0017 19.3 1.2 2 23 343 365 342 365 0.95

11 17 0.0079 0.68 11.1 1.7 1 23 371 394 371 394 0.97

12 17 0.44 38 5.6 1.1 1 23 400 423 400 423 0.95

13 17 4.3e-05 0.0037 18.2 0.9 1 23 428 450 428 450 0.98

14 17 5.1e-06 0.00044 21.2 0.2 1 23 488 510 488 510 0.96

15 17 7.6e-06 0.00065 20.6 0.1 3 23 518 538 516 538 0.97

16 17 3.1e-06 0.00026 21.9 4.4 1 23 544 566 544 566 0.98

17 17 0.00048 0.041 15.0 2.0 1 21 572 592 572 593 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	5.3e-06	0.00045	21.1	1.5	1	23	81	103	81	103	0.97
2	17	0.04	3.4	8.9	0.2	1	23	108	131	108	131	0.91
3	17	0.0014	0.12	13.4	10.1	1	23	136	158	136	158	0.97
4	17	5e-05	0.0042	18.0	4.8	1	23	167	189	167	189	0.99
5	17	5.1e-07	4.3e-05	24.3	1.1	1	23	196	218	196	218	0.98
6	17	2.2e-05	0.0019	19.2	0.9	1	23	224	246	224	246	0.98
7	17	1.3e-06	0.00011	23.0	2.1	1	23	252	274	252	274	0.98
8	17	0.049	4.2	8.6	2.4	1	19	280	298	280	301	0.94
9	17	0.00031	0.026	15.5	3.0	3	23	317	337	315	337	0.96
10	17	2e-05	0.0017	19.3	1.2	2	23	343	365	342	365	0.95
11	17	0.0079	0.68	11.1	1.7	1	23	371	394	371	394	0.97
12	17	0.44	38	5.6	1.1	1	23	400	423	400	423	0.95
13	17	4.3e-05	0.0037	18.2	0.9	1	23	428	450	428	450	0.98
14	17	5.1e-06	0.00044	21.2	0.2	1	23	488	510	488	510	0.96
15	17	7.6e-06	0.00065	20.6	0.1	3	23	518	538	516	538	0.97
16	17	3.1e-06	0.00026	21.9	4.4	1	23	544	566	544	566	0.98
17	17	0.00048	0.041	15.0	2.0	1	21	572	592	572	593	0.94

Sequence Information

Coding Sequence: ATGAAACTTGCGAGGACAAGCGGCCCCATAAATGCGATATTGTTCTATGGGTTTTGTAGCGAGAATGTTCAATTGTGGATTTGTGATCTTCGTGGATGGGGAATACCGATCAAATTGCGTCTCGGGGAGAACCAACAAGTCCCCAAGGAAAAACCGTCGGTGTCTGATAAGCCTGATGAAAAACTTAAGACGAACTTGCCCACGAAAGTAGCCGCAGCCGCTGGTGAATCACCGAAACCTTACTCTTGTAAGATTTGCAAGAAGGGCTTCAAGTTGAAATCGAACTTGGAGAAACACGGCTCGATGCACAAAGAGCGCAGATTCAAGTGTTCAATGTGCTCGATGACTTCCCCTTACAAATCGACGATCGAGAAACACGTGGCCGCCGTTCACGACGGAATTCGCTTCTTTTGCAAGCATTGCAACAAACTGTTCAAGCAGCATTACTACTTCAGGGATCACATGAAGACGCACGAACCCGGCTACGTCGACACCTCTTACAAATGCGACTTTTGCCCAAAATCGTTCAAGACAAAGCACATTTTGAAGAGACATGTGAAAATGCACAACGCCGAGAGAGACTTTTTCGTTTGTGACGTCTGCGGAAAGAAGTTTACGGAACGCGGATATTTCAAAACGCACATGAGAGTGCACACCGGGGAGAAGCCGTACGTGTGCGATTTCTGCGGCAAGGGATTCACCCTGACGAAGTACCTCAAGACTCACGTGCGGGTGCATACTAAAGAAAAACCGTACAGTTGTGACGTTTGCAAGAAGAGTTTCACCCAAAAAGGGAGTTTGACCATTCACAAGAGGTACCACACAGGGGAGCGGCCCTACACGTGTCGTGTTTGTGCCAAAGGATTTGTGTCCAAGACGTTTTTGAACCAGCACAACTGCAaagATCCTTTGCAAATTGACGATCCTCAGCTGGGCGTCCGGATCTGCTGTCCTGCATGTCCCAAGACCTTCACCACCAAACAAAAATACTGGAGCCACAGAAAAACTCATAAAGGCAACACCGTTCAGTGCACTTTGTGTCCAAAGTCGTTCCATTCGAAATCTTATCTGAAAATTCATTTGGGAACGGTCCACGAAAAACTGCGCAACTTCTCTTGCACGTTGTGCACTTACGCCGCTGGCACGAAGTCGTGTCTCCAGTCTCACATGATCAGGAGCCACACCAAAGACTACCCCTACAGATGTGACCTTTGCAATATGGGGTATCTCTTTAAGGACAAACTCGATCAGCATCGCCGAGCCAAGCACGAGGGCAAGCGTTTTATTTGCGAGATCTGCAAGAAAATATATAGAGACGAGGTGTACTTCAACCAACACATGCAAAGACACGATCCCAATCACATCCGGAAGGTGTACACTTGCAAGGTGTGTCTCAAGGTGATGCACTGGCACACGCAGTTCAAGAATCACATGAAGACACACGACAGAGCGGCCGATCGACACATTTGCGACATCTGCGGGAAAGCTTTGGCTAGTCAGGATGGGCTCAGGAAGCACATGATCAGACATGCCAACAAGAGGAATTCCATTTGTGACACTTGCGGCAAGGCTTTCATCGACAATGTGACCCTGGTGCAGCACATTCGCGTTCACACCAAAGAAAAACCTTACAAGTGTAGTTTCTGCGAGAAGTGTTTCACTCAGAGAAGCAGTCTGAACATACACGTGCGCCTCCACACCGGAGAAAAACCGTACAAGTGTAAAATTTGCTCCAGGGAGTTTATTTCGAAGACTTTATTGAACAGCCACAAGTGTATCGCTACCTCTTGA
Protein Sequence: MKLARTSGPINAILFYGFCSENVQLWICDLRGWGIPIKLRLGENQQVPKEKPSVSDKPDEKLKTNLPTKVAAAAGESPKPYSCKICKKGFKLKSNLEKHGSMHKERRFKCSMCSMTSPYKSTIEKHVAAVHDGIRFFCKHCNKLFKQHYYFRDHMKTHEPGYVDTSYKCDFCPKSFKTKHILKRHVKMHNAERDFFVCDVCGKKFTERGYFKTHMRVHTGEKPYVCDFCGKGFTLTKYLKTHVRVHTKEKPYSCDVCKKSFTQKGSLTIHKRYHTGERPYTCRVCAKGFVSKTFLNQHNCKDPLQIDDPQLGVRICCPACPKTFTTKQKYWSHRKTHKGNTVQCTLCPKSFHSKSYLKIHLGTVHEKLRNFSCTLCTYAAGTKSCLQSHMIRSHTKDYPYRCDLCNMGYLFKDKLDQHRRAKHEGKRFICEICKKIYRDEVYFNQHMQRHDPNHIRKVYTCKVCLKVMHWHTQFKNHMKTHDRAADRHICDICGKALASQDGLRKHMIRHANKRNSICDTCGKAFIDNVTLVQHIRVHTKEKPYKCSFCEKCFTQRSSLNIHVRLHTGEKPYKCKICSREFISKTLLNSHKCIATS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -