Basic Information

Gene Symbol
Camta1
Assembly
GCA_963966145.1
Location
OZ014540.1:21096303-21107937[-]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 1.4e-14 1.3e-10 41.6 0.2 78 116 3 40 1 40 0.94
2 4 0.26 2.4e+03 -1.2 0.0 27 58 173 204 165 210 0.82
3 4 0.78 7.2e+03 -2.7 0.1 68 97 278 309 273 323 0.53
4 4 0.2 1.8e+03 -0.8 2.0 46 87 1202 1245 1159 1302 0.56

Sequence Information

Coding Sequence
ATGAAAACTAGCTGCATATATGGCTGTTACGTCCACTCAGCGATATTGCCAACGTTTCACAGAAGGTGCTACTGGCTCCTTCAGAACCCTGACATAGTACTAGTCCATTATTTGAACGTTCCATATCCGGACGACAACAAACTAGCCGTGATAACCCCAAGTTTGGCCTTGTGGGCCGACAAGAAAGAATGGACTAAAGACGAACTTGTCTCACAGTTGAAACCGATGTTCTTCAGCGAAGACGAGCCCGACTTAAACAACGAACTAGAAATATCGaattttaaattgcagACTGCTGAAACCGTAGAAGCTATCGTTAGTCAATTAATGGAAAAACAACGCGTGGCACGTCAAGCCGCGTTGGTCAAACAATTAGAATGCGGCTGCCCCGATTCGACTTGTGCCGACGGCAAAAGTTGCTCGCATCCCATGCGAAGGATAACTTCGGCGAAGGACGTCGCGTCGCCTTTGCCCAGTTCCAGCTCGAATTCGAGACCTCCGAGCAGTGCAGATAACAACAATCAAGTTTCGTCGACTACCGGCTCAGGATCTATGCTCTTGACGAACAACAATTCGCCTCGCGTCTACTCGAGAGATTCGAGAAACCATCAGACTGGAGGACAGAGTAATTGTTCTTCCAGTTCCGGTAATACTCCACCTCTGGTACTAAGCCTGAGCCAGATCCAAGGCGGCGGGGGACTTCTCATTCTCAACAGTAATTCGAGCAGTTCCCCCAACAATACAAGTCACCAAAATCTAGTTACTCCTGTTTCCGTGGCCAACTTCGTTTGCAACACAAATAACAGAGGACTGGTGAAGAACGAAGCCAGGAACGGTCACTTGGTGTTGAAACAGGAGGTGATGGACACCAACGCATCGTCTTGTTGTCACGCTTCCAAACAGGACAACAAAATGAATCAAAGAGAAACCAAGATGGAAGTTAATGAAAACTTGAGACAATCAGTGTTTGATGGGATTTCGTACAGCAGACAACAACAGCATCATCACCAGACGGAGGTCGTAATGTCGAGCGCTCCATCGACTCCATCCAAACACATGGACACGAGCCACGAAGAAGTGATAGAGGATTACAAACACCAGAACTTCTGTGGTGACACCGTGGTCCTTTTGGGAACTGATTCTAGTGGTTCATTAGTTAGCAAAAGCGACGGTTCTTCCATAATTAACGGCGGTTTTTTCAACGAAACCCTCGACTTATCACAAGAAGACATCCAAAGGACTCTGTCTGCCAATATGCCTTTGTGTTCAACCGAGTTAGATAGACACCAACGCCACAATTCAGAAACCAACACCTCCAACCACCAAGCCAAGCCGAACGAACAGCAGAACATGACGCAAGAGATCAACCCCATGGATTTCATCGACAGCTGTGACGTCGTGGTTTCGCCTACCCACGTCGTCGACGACGACGTGTTCGTCAATTTGGACGCGTTCGATATGTTGGGAGAATTTCCCGATTTGGAGGCTCTCGATTCAGGACAGGCCGCACTCCTAGATGTTAATCCGTCCGGCGGCAACAGACACGAAAAGAATCACAGCGAACAACCTTCCAATAATAACTCCATGGAAGGGTCCGCGAAGATCACCGATTATTCACCAGAATGGGCTTATCCTGAAGGTGGAGTGAAGGTTCTGGTGACGGGACCTTGGCATTCATCGGGTCCTTACACGGTACTTTTCGATACATTCCCGGTACCCACGACTTTAGTGCAAAGTGGGGTTTTACGTTGCTATTGTCCAGCTCATGAAGCCGGACTGGCAACACTTCAAGTAGCGTGTGATGGTTATGTGATTTCCAATTCTGTGATATTCGAATACAAGCTACCACCCAGGGAAGAGCAGGTCGCTGCTCCCGAACCCAAAATCGAGCGGTCGAATGACAATTTACTTAAGTTTACACTTTTACAAAGGTTAGAAGCGATGGATGACAGACTGCAAATTAAACAGGAACCGACCGACGGCTCCGACTGCGTGGAGGATACGGCTCTTTTCTCCCAACCGAACTTCGAAGATCGCCTCGTCACTTTTTGTCAGAACATGACTTCCAGGATATGGAGCCACGGCGAGGAATTGAGCGTTTCATGGTTCGCAAGCCACAGAGGCATGACTCTATTACACTTAGCGGCGTCTTTAGGCTATTCCCGTTTGGTGTGCGCCATGCTCCATTGGCGTGCAGAAAACTCCTCTCTATTATTAGAAACCGAAGTAGACGCCTTGAGCCAAGACGAAGACGGTTTCACTCCATTAATGTGGGCCTGTGCTCGTGGTCATACAGAAACCGCCGTCATGTTGTACAAGTGGAATCACACGGCCCTCAACATGAAGAATACGTCCAATCAGACGGCACTAGAGTGCGCCAAAACCAACAATCACAATGAATTAGTGAAGGAATTAGAGAAGCTCGAACTGAGACGTGATAAAGCTAATATGATGTTGCATTCCTCAAATAGTTTTTCCACCGAATCCCCGACGGTTATTTCGCCAGCGAGTTCGGTGGCATCTTTAACATCGATCGCTTCCACGAGTAAATCGCACGACGGTGTCTTTTTACGACCCGGTGCCGTTACCAGAAGTGAATCTCAGAAATATAAAATGCTTAATATCGATTTGGATTCCGATCCGAATATCATCGGCAGCAACAAAATGCTAGGCTCGATGCCCAGTCCGTTGTTGTCCGACTCGTCCGCAAGTACCAGAGGCAGTAACGGACAAAAACTAATCAAGAGACCTTCCATAGACAGCGGCATTCACATGAGTTGCTGCTCGAATTCGGAAAATTCCAAATCGAAGAATTCTCGACTGTTCAGCTCGCCGAGGCAGTCGAAGTTCGACAGAAGCATGTCGTTACCGTTACAATCGCCCTTATCAACTCGAGATAACTCCTTCGATAGCGAAATGACCGAATCAACCGGGAGAAAAATGGATTTCGCTCTGTGCGAGATAGGGAGTGGACCGAGAAGCAGTAGTCCCCTGATTGATGTGGAGGCCGTCTCTGATGACGAAAGTGACATACACAACAGTACTGTAGGGGAGCAAGACGCGCGAGTGTTGACATTAGCCGAACAAATCATCGCTGCAATGCCCGACAGGATCAAGAACGAAAGCGAGGAGATGCTGCTGGACACGAGTCCCGGACCACCTGACACTTTGCAGCCGAACGACACCCTGTCGGACGTATTTATGGAACCCTTGCTGGACCAGTCATCTTCGAGTTTCGAGTCGAACGAGTTCAACTTCGAGTTCTCGGACCACAACTATCGCTATTATGACGTGGGGACGCCTTGTTCGAGCCTGAGTCCGGCCTCTTCGAGTTGTTTACAATCTCCCTGTTCCTTCACGCTCGATTCGCCGTCGCCTCCGCCCACGACAGCCGACTTCTGTGAATTTTTCCAGGCTTCGGGTAGCGTGTTCGAGAAAGATTTCTCGAATCTGACACTCTCAGATCGTGAACAGAGGGAACTGTACGAAGCCGCCAAGATCATCCAGAAGGCGTACAGGTCGTACAAAGGACGTCTCCAACAGGAACAGGATAAAGAACGGACCGCCGCCATAGTTATCCAAAATTATTACAGACGCTACAAGCAGTACGCTTATTATAAACAAATGACGCATGCTGCTATGGTGATACAGAACGGGTATCGGTCATACTGCGAACATAAACGTTTCAAGAAGAGTCAGGAAGCCGCCGTGTGCATCCAGAACTATTACCGTAACTACAAGGAGCAGGGGGGAAGGGGAAGCCGAGAGGGGACACCCGCTTCCGGGTTAAAACGTACATATTCGCAAAGACGCCAACATCAAGCTGCCAGAAAAATCCAACAGTTCATGAGGCAATCAAAGAACAAGTTACAGAGAGAACGAGCCGAAAGAGAGAGGCAGGGGGGCCCGTTAGCGGATGCCCATCAAAGGTCACAGTCTCAAGGGGGCTCCTCCACATGCATAGGCCCAAATAACAGATCAGGTAGTACCAACTTTTTAGAAGACCAAAGAAATATCAGTGAAAGAAGATGA
Protein Sequence
MKTSCIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKLAVITPSLALWADKKEWTKDELVSQLKPMFFSEDEPDLNNELEISNFKLQTAETVEAIVSQLMEKQRVARQAALVKQLECGCPDSTCADGKSCSHPMRRITSAKDVASPLPSSSSNSRPPSSADNNNQVSSTTGSGSMLLTNNNSPRVYSRDSRNHQTGGQSNCSSSSGNTPPLVLSLSQIQGGGGLLILNSNSSSSPNNTSHQNLVTPVSVANFVCNTNNRGLVKNEARNGHLVLKQEVMDTNASSCCHASKQDNKMNQRETKMEVNENLRQSVFDGISYSRQQQHHHQTEVVMSSAPSTPSKHMDTSHEEVIEDYKHQNFCGDTVVLLGTDSSGSLVSKSDGSSIINGGFFNETLDLSQEDIQRTLSANMPLCSTELDRHQRHNSETNTSNHQAKPNEQQNMTQEINPMDFIDSCDVVVSPTHVVDDDVFVNLDAFDMLGEFPDLEALDSGQAALLDVNPSGGNRHEKNHSEQPSNNNSMEGSAKITDYSPEWAYPEGGVKVLVTGPWHSSGPYTVLFDTFPVPTTLVQSGVLRCYCPAHEAGLATLQVACDGYVISNSVIFEYKLPPREEQVAAPEPKIERSNDNLLKFTLLQRLEAMDDRLQIKQEPTDGSDCVEDTALFSQPNFEDRLVTFCQNMTSRIWSHGEELSVSWFASHRGMTLLHLAASLGYSRLVCAMLHWRAENSSLLLETEVDALSQDEDGFTPLMWACARGHTETAVMLYKWNHTALNMKNTSNQTALECAKTNNHNELVKELEKLELRRDKANMMLHSSNSFSTESPTVISPASSVASLTSIASTSKSHDGVFLRPGAVTRSESQKYKMLNIDLDSDPNIIGSNKMLGSMPSPLLSDSSASTRGSNGQKLIKRPSIDSGIHMSCCSNSENSKSKNSRLFSSPRQSKFDRSMSLPLQSPLSTRDNSFDSEMTESTGRKMDFALCEIGSGPRSSSPLIDVEAVSDDESDIHNSTVGEQDARVLTLAEQIIAAMPDRIKNESEEMLLDTSPGPPDTLQPNDTLSDVFMEPLLDQSSSSFESNEFNFEFSDHNYRYYDVGTPCSSLSPASSSCLQSPCSFTLDSPSPPPTTADFCEFFQASGSVFEKDFSNLTLSDREQRELYEAAKIIQKAYRSYKGRLQQEQDKERTAAIVIQNYYRRYKQYAYYKQMTHAAMVIQNGYRSYCEHKRFKKSQEAAVCIQNYYRNYKEQGGRGSREGTPASGLKRTYSQRRQHQAARKIQQFMRQSKNKLQRERAERERQGGPLADAHQRSQSQGGSSTCIGPNNRSGSTNFLEDQRNISERR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00841841;
90% Identity
iTF_00415106;
80% Identity
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