Tmol012040.1
Basic Information
- Insect
- Tenebrio molitor
- Gene Symbol
- jockey\pol
- Assembly
- GCA_963966145.1
- Location
- OZ014541.1:17617134-17623548[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.4e-11 2.8e-08 33.9 0.0 3 37 17 51 15 58 0.86
Sequence Information
- Coding Sequence
- ATGCCGAAAGTAATTGAGGGCTCAAGatataagaaaaaatataaccaAGAAGCAATATCAAAGGCTTTAGAAGACATATTAAATAATGGTGTATCAAAAAAAGCGGCTTCAAAGAAATATGGAATACCACGTTCAACACTGCAATTTCGATTGAGTCAAAAATTCACCAAAACAACATTTGGACCGAGTCCGATTCTTTCAAAGGAAGAAGAACAAATTCTAGTTGATTGGGTTCTTCAGAGTCATCGAAAAGGTTTTCCGCGAAGAAAGGAAGACTTGCAAGTCAGCGTCAAATCATTTCTAGATGAGAAACCAAGGGACAACCCTTTCAAAGATAATATGCCGGGTGATGGGTGGTACAAAGCATTTTTGAAGAGACATCCTGCATTGTGTGAAAGAGTACCTGAAGCCGTGACTGCTGCCAGTTCGAAGCCGTACCACGATGCCCTCGAAATAACACCTGAGGAGATGAAACGGGAAGCGGCCAAGATTAAAAGCAAGAAAGCGCCGGGCCCTGACGGCATACCGCCAAAAATCGTCAAAGTCACTTGCACGAGCACTCCCGACAAGGTAAGGGTGGTGCCTATTCCAAAACCGAATAAGACCCCGACCAATCTGGATGCATACCGGCCTATATGCATGCTGGATGGTTTGGGTAAGCTGCTggaaaaaattctggtcgacAGGATAATGAAGTAG
- Protein Sequence
- MPKVIEGSRYKKKYNQEAISKALEDILNNGVSKKAASKKYGIPRSTLQFRLSQKFTKTTFGPSPILSKEEEQILVDWVLQSHRKGFPRRKEDLQVSVKSFLDEKPRDNPFKDNMPGDGWYKAFLKRHPALCERVPEAVTAASSKPYHDALEITPEEMKREAAKIKSKKAPGPDGIPPKIVKVTCTSTPDKVRVVPIPKPNKTPTNLDAYRPICMLDGLGKLLEKILVDRIMK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -