Basic Information

Insect: Temnothorax unifasciatus
Gene Symbol: -
Assembly: GCA_030770225.1
Location: JASTWK010002475.1:72753-80238[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 4.2 6.7e+02 2.3 0.3 1 23 172 197 172 197 0.94

2 17 3.2 5e+02 2.7 0.4 3 23 212 232 211 233 0.79

3 17 4.4 7e+02 2.2 3.2 1 23 239 261 239 261 0.96

4 17 0.00069 0.11 14.2 0.3 2 23 267 288 266 288 0.97

5 17 1.5 2.4e+02 3.7 9.3 2 21 574 593 573 596 0.94

6 17 2.8 4.5e+02 2.8 1.0 1 23 662 684 662 684 0.82

7 17 3.5 5.5e+02 2.6 1.5 2 23 863 884 862 884 0.96

8 17 0.39 62 5.6 0.2 3 23 901 921 899 921 0.97

9 17 0.012 1.9 10.3 0.2 1 23 929 951 929 951 0.98

10 17 0.21 33 6.4 1.0 2 23 1051 1072 1050 1072 0.95

11 17 0.16 26 6.7 0.7 3 23 1084 1104 1082 1104 0.96

12 17 0.004 0.63 11.8 0.2 1 23 1181 1203 1181 1203 0.98

13 17 0.045 7.1 8.5 0.3 1 23 1277 1299 1277 1299 0.97

14 17 1.1e-05 0.0017 19.9 0.7 1 23 1305 1327 1305 1327 0.98

15 17 0.0066 1 11.1 2.6 1 23 1397 1419 1397 1419 0.97

16 17 0.0018 0.29 12.9 1.7 1 23 1425 1447 1425 1447 0.99

17 17 1.5 2.4e+02 3.7 0.4 2 23 1544 1565 1543 1565 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	4.2	6.7e+02	2.3	0.3	1	23	172	197	172	197	0.94
2	17	3.2	5e+02	2.7	0.4	3	23	212	232	211	233	0.79
3	17	4.4	7e+02	2.2	3.2	1	23	239	261	239	261	0.96
4	17	0.00069	0.11	14.2	0.3	2	23	267	288	266	288	0.97
5	17	1.5	2.4e+02	3.7	9.3	2	21	574	593	573	596	0.94
6	17	2.8	4.5e+02	2.8	1.0	1	23	662	684	662	684	0.82
7	17	3.5	5.5e+02	2.6	1.5	2	23	863	884	862	884	0.96
8	17	0.39	62	5.6	0.2	3	23	901	921	899	921	0.97
9	17	0.012	1.9	10.3	0.2	1	23	929	951	929	951	0.98
10	17	0.21	33	6.4	1.0	2	23	1051	1072	1050	1072	0.95
11	17	0.16	26	6.7	0.7	3	23	1084	1104	1082	1104	0.96
12	17	0.004	0.63	11.8	0.2	1	23	1181	1203	1181	1203	0.98
13	17	0.045	7.1	8.5	0.3	1	23	1277	1299	1277	1299	0.97
14	17	1.1e-05	0.0017	19.9	0.7	1	23	1305	1327	1305	1327	0.98
15	17	0.0066	1	11.1	2.6	1	23	1397	1419	1397	1419	0.97
16	17	0.0018	0.29	12.9	1.7	1	23	1425	1447	1425	1447	0.99
17	17	1.5	2.4e+02	3.7	0.4	2	23	1544	1565	1543	1565	0.96

Sequence Information

Coding Sequence: ATGTTTCCTGCGGCGGGCAAGGGCGAGCGAAGAAGTCTGCGCGGAAGCGCGCGGCTCTCGTCCAAGATGTCGGGGAAGCTGCCCCGGTTGCGTGCCCTGCGACCGCGGCCGCAGCAACAAAGGCGCGCGAGAACGGGGCCCGTTCTCGCCGTCGGCGCCACGACGACTCCGCGACCGGAAGGTAACCTTAAAGGGGCCGTCGCGACGAGTCACGAGGTGGAGCACGATGCGAAGCGGAGGCACGACGCGAAGAAGGGCGAAGACACGGGCACGGCCGGCGCTGTGAGCCAGGCGAGCGTGATGGACGAGGAGGACAATGACGACGAGTTAACGatgaccgccgccgccgtcgtcgacgaggaggacgaggaggaggaggcggaggaggtggaggagcgggaggaggacgaggacgaggaaaCGATCCtggacgtcgacgtcgacgtcgacgttgACGTCGCGGTGAATACCGAGGAGACGATGGACGTCGAGGCGAGCGAGCAGCAAGCGTCTTACGAGTGCAAGACCTGCGAGCCGTCCAAAACGTTGCCCAGTATCAAGGCCTACTTCGAGCACCTGCGAAAGGAGCACAAGTACAAGgGCAAAAACGGGCACAGTCCAGTCGAAAATCGTTGCCCTGCGTGTTCGTATGTCGCATTGAACGTGAAAGATCTTGAAAATCACCAAAGAGTGCACcatttgaaaagaaaattctttcGATGCGCAAAATGCGATTACGTGACGCACATCAGAGCGCGTTATACTAAGCATGTTAAATATCATTCTATGCCGATGATCAAGTGCGATGCTTGTGATTTTAGTTCAGCGTATAAGTGGAATCTAGAAAGACACATGCGGAATCATGGAGGTGGAGGTGCTTACAAATGTCGTGCATGTAATTTTACCGCTGATATCCGTCAGAGCTTAACGGTGCATGAGTCGTATCATCATGACCCACCTGTGGGTCAGGTCAACCGCAAAAGTAATAACGCTTTCGAACGTAAGCCACGAAATAGTCCAAAACGTTATAATCAGGTTGGAGCCAGTGACTTTCGAGAAgcgttaaataaaaacgaaagtACAACCACGTCGGCCGGTTCCTCTGATTCGTTCGTGTCGGATCACTCGTTAATTTCGTTAGACGCTAAGAAAAGCGCCCTGGCCAGCGCGGAGTGCATCGCGTTAAAATGCGAGGAGAAAGGCTGCCAATTTATAACAGCCTGGGATTCCGAGATGCAGCGTCACTTAGCGGAATGCCACGCGCCGGTTGTCCCGTCGAAGCCAAGAAAGCCACTGCCAATGTTGATTCCACTGAGCCTAGCCCCAGCGAGCCCTAAGCCCAATAACACGCACGGTAATAGCGGCCCACCTACGACCCTCCTAAAGGTTCCGCGCGTCAGAGTGAGGCCTGAACTGGCGCAAATCGCGAGAGATACGGAGCTGGCTAAGATGTACGGGAACAAGGAGGCCGCGAATTCGAAGAAGAATCTCAGTACCGCGGCTGGTGTATTTGAGAGAAAGAATGCCTCCTTCTTCGATAAACTGAAGGAAAAACTAACGACGACAGCGACGTCGATTAATAACGGTGTGCCGGAGGTAGCTGTAAGTAGTGAGACAGACTTGAAATGCTGGTGTACGTTTAAAGCTAGTAGCATGGAAGAGCTAGCTTGCCACAAACAAACACACCACACCGCGCTCAGCGTATCCGTGGGCACGACACGTTGCCCTAAGTGTAGAAGACGTTGCAAGAGTACGACTGATCTCCAAACGCATATGCAATGCTGCCACTCGCGCAACGACGCAACGCCGTCCATCGATAGTAGTTTAGAGAAAGTAACGAATCGCTCAGACGTCCGCATGACCTTGTACCGTGACGAATACTCGTTTCCGTCGCAATTGGATTGGGACGCGAATCTCAGAGGACTAAATTCTTCTGGACCTCCGTTCGAAGGTGGTCCGACACATCCGAGTGGGCGGCGGGTATTCAAATGTCCCCATTGTCCGTTTTGGGCTTCGACCGCAAGTCGCTTTCACGTACATATAGTCGGTCATTTAAACCGGAAGCCGTTCGAGTGTTCAATGTGCGCGTATCGTTCTAACTGGCGATGGGACATCACAAAACATATTAAGCTTAAAGCGGCTAAAGACGCAGTGCATACGAGCGCCAGAGTGCTCATGACGGATGAGACAGGTCGACGGAATTATtccaaatataacaaatacCTCGCACAGGTAGAACAGCAGTCGTGGGATGAGGATCGCATGGAGCAGCGTAGCATAGAGGAAACGAACTCGGAAGAATCGTCGACGAAGTTGTTGATCGTGGGCAATAAAGAGTACGTTCCGATAACCGGTCCGTCGTCACAATCACCCATCACGATTTTACCGTCGAGCGAGGCAAATCAGAACAGTCATAGCGTAGACGTGAGTCTGCGACCTCCGCCACCGCTCAAAGCAGCTCAAATCAGAAGTCGCGGGCAGTCTCTGTTGAAGAACAGTCCTATCACGATGCATTTCACCACCCCTAGTGGTGGTGGCGCGGTCTCCATATCTCCAGCGATGGATGAGAGTAAACGCACTCAGTGGAAATGTAAACGTTGTAATTACCGAGATACTAACAAAAATAACGTGTTGTTACATGTTAAATCTCATTACGAATCTGCTGATCACGAGTCTATCGAAGAAAGGAATCCATTTGGTTGTGGGGATTGTCCGTTTTCAGCATCGGATGCTGCCACTCTGTCTCTTCACAGGATGCACCATCGGCCGAACTTAGAAGCTATATTTAAATGCTATCTTTGTCCATACTACGTTAGTACAAAGGCAGAACTGTTGGAGCACGCTAGGCTCCACGGGGAAGAGCTGGCAGCTATGCATCAGCATAATATAGATCTCCAGTTTTCAAACTCCAAGAATCAATCGCAACAAGTATCAATTCCCGAAGGCGGTGTTTCTCGAACGAAGGACGAATCGTCTATAGAACAAGTGATTCAGGTAACGTCGCGCAACAACGTAACGGCGTCTTCAAAAATCGCGGGAGCTCAGCCACAACCACCCCCACCACCGTCGCTTCTCCTGGACACCCGTGCCTTTCCAGACGCTCCGCTGGTTTGGGTATCGCGGCTAGATGGCACCCTGACGAAGATGCTCAAGTGTCGCCATTGTCCGTATATCTCGTCGCGACGTGCGGAAGTTCGCGACCACGAGACAATGCATGTAGACATGCCAACTCACGGTCCCTTGATCGCCTGCACGGATTGTAGCTTCACTTGCTCGCGTCGTGAGGTCATGATCGCGCATACAGAAATGCATGCGGGATCTCTCGGGACTGTTCACTGTCTCGTCGACGAGACGCGACCTGATGCCCAACAGGTGAGCGATCTGGCCACTCTACTTGGCATGGCGCACACTCCCGTGCTGGGCACTGAGCCCGATCTGCAGGACTCGCGTCTGGTGCATTGCTGTGGCAAGTGCCCGGCACGGTTTCTGTGCGAAAAAGAGCTGCGTATCCATCTGCGTTACCACACCACCGAACTGGCGTATTCATGCCAATGGTGTTCGTATGCAGCGCGACAGCCGGCGCATCTACTGGCTCATCAAAAGGCGCACTCGACCGAGTATCAGGAGCGCACCAAGTATCTGTTGTCCTTGTACGGCCACTCGCAGCGTTATCCACCGCCCGCAACAGCGTGCGTCGAGGCGGAGAATCGGGAAGACAATGATAGCGTGCCGAACGTCGCGTGGATCGTCGTTGAAATCAACGAGAACGCGAATGCCTCGTACAACAGTATCAACGGCACGATCGTTCAGAGGCCCGGGGGTCAGGTGTTCACGTGCGCCAAGTGTCCGGCTCGTTACTTTAAACTGGATGCTTTGGAATACCATATGACGCTTCACGGTTCAAACAATCGGTTCAAGTGTAATGACTGCGATTATTCGTCGAAAACGGCACAGAATCTAATGAAACATCAAGCGGTGCATCGGCGGCATACCGAAACCATTGAAGTGACCGCGGAGGTACCGTCTACCACCACCACTGCTAGCACCACCGCCGACTCTGCTTCGACGTCCTCTCCTGGGTCGCCACAGCAGTCGCCACCGGATCCGCAATTCGGTATCTTTATGCGCGGCAATCCAAACTTCGTTTATCCAGGCTACCTGAGGAACGGCCGTCTGAAGGAAAAGCGCTACAAGTGTCACAAATGTCCGTCCGCTTTTGAAAAGCGCGAGCAATATAGAGTTCATTTGACCCTGCACGGTGCGAAACAACGTTATCGTTGCGACACGTGCGACTACTCGGTCAAATACTACGCAAATTACGTACAGCATCTGAAGAAACACCAGGCGAACGCGGAAGCGCAGGCATCGCGCAGACAGTTCGAGGACGATCGGATCTCGATCGATAACGACAGCATCACCGACATAGTTGCATCAACATCGTCGCGCAAGTCCTTGCGATCGTCTGCCACTGCTGTTAACATGCTCGCGGTATTGTCTTCCGTTAACAATGCGTCGAATGTCAATAACACAGCCGCGCTACAACCCTCTAATCAGGACAAGCAGAGTTTTCTGCTGATGCAAAAGAAGGGCATTATTTCGTCGACGGGCGAGGCCGACGCGGAGACGATCCGCTGCCTGAGTTGCCCGTTCTCCACCACCGACAAGGACGTCATGGACGCGCACAAGCGTCGTCATGGCATCGAGCGCATGACGCCGCCGTGCCCGCATTGCGACTACATTCCGCGGAAAGACGAGAATATCGGTGAGCACATCAAGCTACACTTCACGAGGTTGTACAAGCCCGAGTCCTATCTCATCGTCGAGCTGCTAACGCTGACAATGGAGAAGGTATCCGCGAACAGCAAGAACGAAAAGGGTCAGCGGTTGAAGGAGCTATTGTTCAAGGAATGCCCCGACGGTAGATTCCTGCCACTCGCCGAATCGATCAACTCTCTTTCCTTAGGTACCTCTTCTACAATAAAGTCTGTCAAGGAGAAGGTCACCGTAGATCCAAACACGGGCGAGACCAAACATCATCGCGTTGCCACGTAA
Protein Sequence: MFPAAGKGERRSLRGSARLSSKMSGKLPRLRALRPRPQQQRRARTGPVLAVGATTTPRPEGNLKGAVATSHEVEHDAKRRHDAKKGEDTGTAGAVSQASVMDEEDNDDELTMTAAAVVDEEDEEEEAEEVEEREEDEDEETILDVDVDVDVDVAVNTEETMDVEASEQQASYECKTCEPSKTLPSIKAYFEHLRKEHKYKGKNGHSPVENRCPACSYVALNVKDLENHQRVHHLKRKFFRCAKCDYVTHIRARYTKHVKYHSMPMIKCDACDFSSAYKWNLERHMRNHGGGGAYKCRACNFTADIRQSLTVHESYHHDPPVGQVNRKSNNAFERKPRNSPKRYNQVGASDFREALNKNESTTTSAGSSDSFVSDHSLISLDAKKSALASAECIALKCEEKGCQFITAWDSEMQRHLAECHAPVVPSKPRKPLPMLIPLSLAPASPKPNNTHGNSGPPTTLLKVPRVRVRPELAQIARDTELAKMYGNKEAANSKKNLSTAAGVFERKNASFFDKLKEKLTTTATSINNGVPEVAVSSETDLKCWCTFKASSMEELACHKQTHHTALSVSVGTTRCPKCRRRCKSTTDLQTHMQCCHSRNDATPSIDSSLEKVTNRSDVRMTLYRDEYSFPSQLDWDANLRGLNSSGPPFEGGPTHPSGRRVFKCPHCPFWASTASRFHVHIVGHLNRKPFECSMCAYRSNWRWDITKHIKLKAAKDAVHTSARVLMTDETGRRNYSKYNKYLAQVEQQSWDEDRMEQRSIEETNSEESSTKLLIVGNKEYVPITGPSSQSPITILPSSEANQNSHSVDVSLRPPPPLKAAQIRSRGQSLLKNSPITMHFTTPSGGGAVSISPAMDESKRTQWKCKRCNYRDTNKNNVLLHVKSHYESADHESIEERNPFGCGDCPFSASDAATLSLHRMHHRPNLEAIFKCYLCPYYVSTKAELLEHARLHGEELAAMHQHNIDLQFSNSKNQSQQVSIPEGGVSRTKDESSIEQVIQVTSRNNVTASSKIAGAQPQPPPPPSLLLDTRAFPDAPLVWVSRLDGTLTKMLKCRHCPYISSRRAEVRDHETMHVDMPTHGPLIACTDCSFTCSRREVMIAHTEMHAGSLGTVHCLVDETRPDAQQVSDLATLLGMAHTPVLGTEPDLQDSRLVHCCGKCPARFLCEKELRIHLRYHTTELAYSCQWCSYAARQPAHLLAHQKAHSTEYQERTKYLLSLYGHSQRYPPPATACVEAENREDNDSVPNVAWIVVEINENANASYNSINGTIVQRPGGQVFTCAKCPARYFKLDALEYHMTLHGSNNRFKCNDCDYSSKTAQNLMKHQAVHRRHTETIEVTAEVPSTTTTASTTADSASTSSPGSPQQSPPDPQFGIFMRGNPNFVYPGYLRNGRLKEKRYKCHKCPSAFEKREQYRVHLTLHGAKQRYRCDTCDYSVKYYANYVQHLKKHQANAEAQASRRQFEDDRISIDNDSITDIVASTSSRKSLRSSATAVNMLAVLSSVNNASNVNNTAALQPSNQDKQSFLLMQKKGIISSTGEADAETIRCLSCPFSTTDKDVMDAHKRRHGIERMTPPCPHCDYIPRKDENIGEHIKLHFTRLYKPESYLIVELLTLTMEKVSANSKNEKGQRLKELLFKECPDGRFLPLAESINSLSLGTSSTIKSVKEKVTVDPNTGETKHHRVAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00127818;
90% Identity: -
80% Identity: -