Basic Information

Insect: Temnothorax unifasciatus
Gene Symbol: GLIS3
Assembly: GCA_030770225.1
Location: JASTWK010000088.1:471673-476011[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.0007 0.11 14.2 0.2 1 23 316 341 316 341 0.97

2 5 0.49 78 5.2 0.1 5 23 394 414 388 414 0.79

3 5 1.6e-06 0.00025 22.5 0.6 2 23 421 444 420 444 0.97

4 5 8.8e-05 0.014 17.0 2.1 1 23 450 474 450 474 0.95

5 5 2e-06 0.00031 22.2 0.2 1 23 480 504 480 504 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.0007	0.11	14.2	0.2	1	23	316	341	316	341	0.97
2	5	0.49	78	5.2	0.1	5	23	394	414	388	414	0.79
3	5	1.6e-06	0.00025	22.5	0.6	2	23	421	444	420	444	0.97
4	5	8.8e-05	0.014	17.0	2.1	1	23	450	474	450	474	0.95
5	5	2e-06	0.00031	22.2	0.2	1	23	480	504	480	504	0.96

Sequence Information

Coding Sequence: atgCACCTCGAGGATTACCACGGCGAGAGGAGCGAGGAGGACGTGCGACGGCCCGTGTCCGTTCTGGAGCAAGACGACTTCGTCGACGACGGTTCCCTGCCCGATCTGATGTCCATTACGATGGCCGGCATGGACGTCGACGTCGCCCAGTGCTGGACGACCTCGCAAGCGGACAATGTCTTCTTCTCGCCGCTGGAAACCGACGCGGACCCGCGAGATTATCTCGACTGGGACCAGGTGCCCGTTGTCTTTCAGTATCCCTCCAACGGCGGCGGATCACCGGGTGGTAGCACCTCCAGCGAAGCAACAACGCCGATCTGGAGCAACGCGGTGACagcgtcgacgacgacgacgacggcgacggcgacggatCATGACGAGGAGAAATCGGACCGGAAGTTACCCTCAATGGGCTCGGCCTTTCCCTTCTCGCGCACATTCTGCAACACGATCTATCCGGAATTTGGAGCGGAGTCGCAGGGTGATTATCAGGATTACCCGGACTGCCAGGAGGACGTGGTGTCGTTGTTGATGAGCATTCAGAACGACGTGGCGGCGGCTCAGAGCTACAACCCTCCAGTCGCCGACGAATTCGACCTCAGTCTGATTAGGGGCGACCCGACGTCGTTGCTGAGCACCGTGGACTCATCGTCCACGAACTGTTTCGCGAGCGACGATCAGCAGGAACCGTCCCAGAGCTTCAATCCGCCGTACTACGCGGTCGGGCATCTCGTCTCCTCCCAGCAGCAGCCATCGACCATCAGTCTCGCCGGTGAGCTCGTCGGTGCGATGGACAGTTTCGGTAATCAGGTGATACTACCGCGGAACGAGGGTCTGCTGCTCGGGAATGATCGACGTGCCGCTGGGTCGAAGGTCGCTGAAACCGAGAAGAACGACAAGTCTTACGATTGCGCGAGACCGGTGGACGATAGCCTCGCGTCGGCTTATCAGTGCCGCTGGATCGACTGCGGCTGTGCGTTCGCGGAGCAGGAGGGCCTGGTGCGGCACATCGAGAGGCGGCACGTGGAGTCGTCCTCGGCGAGCGCGCACGGCCACGGCAGGCGGATTCAGCGGGACCGGGACAAGGAGCGAGACGGCAAGGAGACCGGAGAGAGCTTCTCCGTCGCGAcgccggcgacgacgacgggccGCGAGGACGAGTTCGCCTGCCTGTGGCAGGGATGCCCGCGCGCCCGGCCGTTCAACGCGAGATACAAGTTGCTGATCCACATGCGAGTGCACACCCAAGAAAAGCCGAACAAATGTCCGTTTGCCGGCTGTAAGAAGGCCTTCAGTCGTTTAGAAAACTTGAAGATACATCAGAGATCGCACACGGGCGAAAGGCCTTATGCGTGTCAACACAATGGATGTTCAAAGGCGTTTAGCAACAGCAGCGATCGAGCAAAACATCAGAGAACACACTATGACAGAaaaCCATACGCTTGCCAGGTAATCGGCTGCGGCAAACGTTACACCGATCCATCGAGTCTTAGAAAGCACCTGAAAAATCATACGGAAAATTCAAGTACGTTGTCCAGTCTGTTATCGTCGGATAAGGTATCAACGAATAATGTGACAGCAATAGGACACAAGTTAAACTCGACGATTCCTCAGCGAGGAAGCCATGACGCGTGCATTTTTGACGTGGAAACGAATCATTCGTACAAATTGTCTAAAACTTATGTCAAAGAAGAGAACACATCGCCGAACAATTCGTGCCAGCTGAATAGAATCTCCCTGAATTTTGACGGCAATCAGCAGGAATACGTGCCGATCGAATCGGTTCGTCATCTTCTGATCAACGACCTCACCAACGCGCAGGACGAGAATACAGGATTCTGCGTGCCCGCGGAGGACGACGTGCCGGATTTCCACGAGCTCGACATCGAGCGACAGTTCCACGAGCTGAGCGCCCTGAACGACGCTATCTTCATCGACGGATGA
Protein Sequence: MHLEDYHGERSEEDVRRPVSVLEQDDFVDDGSLPDLMSITMAGMDVDVAQCWTTSQADNVFFSPLETDADPRDYLDWDQVPVVFQYPSNGGGSPGGSTSSEATTPIWSNAVTASTTTTTATATDHDEEKSDRKLPSMGSAFPFSRTFCNTIYPEFGAESQGDYQDYPDCQEDVVSLLMSIQNDVAAAQSYNPPVADEFDLSLIRGDPTSLLSTVDSSSTNCFASDDQQEPSQSFNPPYYAVGHLVSSQQQPSTISLAGELVGAMDSFGNQVILPRNEGLLLGNDRRAAGSKVAETEKNDKSYDCARPVDDSLASAYQCRWIDCGCAFAEQEGLVRHIERRHVESSSASAHGHGRRIQRDRDKERDGKETGESFSVATPATTTGREDEFACLWQGCPRARPFNARYKLLIHMRVHTQEKPNKCPFAGCKKAFSRLENLKIHQRSHTGERPYACQHNGCSKAFSNSSDRAKHQRTHYDRKPYACQVIGCGKRYTDPSSLRKHLKNHTENSSTLSSLLSSDKVSTNNVTAIGHKLNSTIPQRGSHDACIFDVETNHSYKLSKTYVKEENTSPNNSCQLNRISLNFDGNQQEYVPIESVRHLLINDLTNAQDENTGFCVPAEDDVPDFHELDIERQFHELSALNDAIFIDG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00765926;
90% Identity: iTF_01407668;
80% Identity: -