Basic Information

Insect: Temnothorax unifasciatus
Gene Symbol: mecom-b
Assembly: GCA_030770225.1
Location: JASTWK010000022.1:59610-73301[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.01 1.6 10.5 0.7 2 23 112 134 111 134 0.95

2 9 0.57 90 5.0 0.1 1 23 141 164 141 164 0.93

3 9 1.2e-05 0.0019 19.8 1.1 1 23 170 197 170 198 0.93

4 9 4.9e-06 0.00077 21.0 2.6 1 23 204 226 204 226 0.95

5 9 3e-05 0.0047 18.5 5.0 1 23 232 254 232 254 0.99

6 9 0.00059 0.094 14.4 0.7 2 21 262 281 261 282 0.95

7 9 7e-09 1.1e-06 29.9 1.2 1 23 638 660 638 660 0.99

8 9 3.7e-07 5.8e-05 24.5 1.7 1 23 666 689 666 689 0.97

9 9 1e-05 0.0016 20.0 3.4 1 23 695 717 695 717 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.01	1.6	10.5	0.7	2	23	112	134	111	134	0.95
2	9	0.57	90	5.0	0.1	1	23	141	164	141	164	0.93
3	9	1.2e-05	0.0019	19.8	1.1	1	23	170	197	170	198	0.93
4	9	4.9e-06	0.00077	21.0	2.6	1	23	204	226	204	226	0.95
5	9	3e-05	0.0047	18.5	5.0	1	23	232	254	232	254	0.99
6	9	0.00059	0.094	14.4	0.7	2	21	262	281	261	282	0.95
7	9	7e-09	1.1e-06	29.9	1.2	1	23	638	660	638	660	0.99
8	9	3.7e-07	5.8e-05	24.5	1.7	1	23	666	689	666	689	0.97
9	9	1e-05	0.0016	20.0	3.4	1	23	695	717	695	717	0.99

Sequence Information

Coding Sequence: ATGGATGTGTTCCAGGTCCGCATAGCTGGCAGTGGAGTAAGAGGCTGGTTGGATGCATCTCACGAGGCAAACAATTGGCTAAAGTATATTCGAAGTACTGCTAGCTCACACGCAGTGAACATGCGCCACGTACTCATCGGCGGTCAGATGGTGTATGAGGCTGTTCGCGATATTGCAACGGGCGAAGAGCTTCTTTTGGGCCTTCGAGAACCGCTTCAGCTGCAGGACATGCTGGGCGAGAATACGACCGAGGACAGAAGCGATCGAGAAACTGCTTCTCAGCACAGTGGAACTGTTGACGAGGACAAGGAGGACGAGGAAGAAGGAGAAACGAGATGTACTGTCTGCGACAAACCGTTTCAAGATATCGAACTattGGATAGCCACCTGGTGACCTGTCATAGATATCCAGCGGAACAGCACCGCTGTGACAGCTGTCCCCGTGCTTACGCTTGGCGGCCACTTCTGGTACGACATCGTGCTATCGTTCACGGTGATCTTAGAAACTATCCCTGCGAAAATTGTCCAAAGTCGAACATCCGGCAGGTCTTCACGGACCCATCAAACCTACAACGCCATATCAGAACGCATCACGTGGGGGCGAGGAGCCACGCTTGCACGGAATGCGGCAAGACCTTCGCGACCAGTTCCGGCCTGAAACAGCACACCCACATTCACAGTAGCGTGAAACCCTTTCAGTGCGAGGTCTGTTTTAAGGCGTACACGCAGTTCTCCAATTTATGCCGGCACAAACGCATGCACGCCGACTGTCGCATGCAGATCAAGTGCGTTAAATGCGGACAATCCTTCAGCACGGTAACATCGTTATCGAAACATAAGCGATTTTGCGACTCCACGACTCCGACTGGTCCGCCTGGAACCATGCCTCAATTACCGACGCCAGCGACGAGCCCCTTTCTGGTGTATCCGCGACCTCCCGTGAGCCTGCCAGGCGGCTTGCCTTTTTATCCGCCTAGTCTGATGGGTCCTTATCCAGGAATTTTCCCAAATGCTCCGAATTTTCTCAACACTCCTCTGCTTTTCCCGCCGAAAATCGAAGAGGCCGAAAAGAGGAGCGACAGTCCCAAGAAGGAACGTTTTACCCCTCCAAGAGTGTTGTCGCAACACAATAAGGTCTCTCCTTCCACGGCGGAGGAGGCCACTTCTACGTTTAGGCCATCTCCGGCTCGACCTCCTGTTCAACCGACGCCGGAAAGTGATGACGATCTTTCAAAGAGAAGAGAAGCTAGAAACAACGAACGAAAAATGGAAACTGAAAGCACTTTGAAGGAGGAGGCGACCGAGCAACCGTTGGATCTAAGGGTTCAGACTAAGAAACAGGACGCTATTTCAAAAGCCGCAAATAGGAAAAGCCGTACTCCGTCGCCAGCCCCAGTACCGATGGAGGAAACGCCCGCACCTCCTGATCGTCCGAAATCGGAAGAGGATGCTGCCGCTCTCCCGCCGATGGAACTCGAGTCTAAGGATGTCCAAGGAAGTAGCCCGCACTTGAGGACCAGTCTGTCAATTGAACAACCGCCGACCAATACACCACCTCACATGGCTTATCCCAGACCGATACACCCGTTGTTCCTCGAAACGATGTATCGCGGTCCAACGGGAAGCTTCCCGGGATTTCCCAGCGCACCGCCACCTCCAGGAGGAGCTACCCCGGAATCTAGGCTGATACCTCCACTTCCGCCCTTCGCTCCACCGCGCGGGCTTCCTTTTTTAGGCTCGCTTATGAACGGGCTCAGCGGCGCTAGGCCAGGAGCAGGATTCGATCTGCTTGCCCGGCCGCCGCTAAGCGCGTTCCCTGGGGTAAAGCCGTTCCAAGAGGCAGTAATGACGCCCCATCATCACCATCATcatcaccatcaccatcacGTCCACGGCAAGATGAAGGATCGGTACTCCTGTAAATTTTGCGGCAAAGTGTTCCCTCGCTCTGCCAATTTAACGAGGCATCTGAGAACGCACACCGGCGAGCAGCCGTACAAGTGTAAGTACTGCGAGAGATCCTTCAGCATCTCAAGCAACCTGCAGAGACACGTCAGGAATATCCACGACAAGCAGCGGCCGTTCAAGTGTCCGCTCTGCGAGAGGTGCTTCGGACAGCAGACCAACCTCGACAGACATCTGAAGAAACACGAGGCTGACGACGGTAGCGGAGTGGTGTCGGTCGCCGATTCGCCTGGAAGCAGCAACGAAAACGAGCGAGAGGATACCTACTTCGACGAGATCAGATCCTTCATGGGCAAGGTTACTTACGGCGGTGAGAGCGGCTACGGGTTGCCGCATCACCCGGCCTATATTCCCAGTCGTCTGCACGAGATAAACGAGTCCAAGATGGAGGTCGAGTatgacgaggacgaggacagCGAGGAGGGTGTGTCTCCGTTGGAGGAGACGGACGGACTGTCGCCGATCGAGGCCAAGGAATCCCCGTCGCCCTCGCAGTACGATCTGAAGCTGAGGGAGAAGCAGGAGCTGCTCAATAATAATACCGCGGAGCCGGTGATCGAGATTTCGACATAG
Protein Sequence: MDVFQVRIAGSGVRGWLDASHEANNWLKYIRSTASSHAVNMRHVLIGGQMVYEAVRDIATGEELLLGLREPLQLQDMLGENTTEDRSDRETASQHSGTVDEDKEDEEEGETRCTVCDKPFQDIELLDSHLVTCHRYPAEQHRCDSCPRAYAWRPLLVRHRAIVHGDLRNYPCENCPKSNIRQVFTDPSNLQRHIRTHHVGARSHACTECGKTFATSSGLKQHTHIHSSVKPFQCEVCFKAYTQFSNLCRHKRMHADCRMQIKCVKCGQSFSTVTSLSKHKRFCDSTTPTGPPGTMPQLPTPATSPFLVYPRPPVSLPGGLPFYPPSLMGPYPGIFPNAPNFLNTPLLFPPKIEEAEKRSDSPKKERFTPPRVLSQHNKVSPSTAEEATSTFRPSPARPPVQPTPESDDDLSKRREARNNERKMETESTLKEEATEQPLDLRVQTKKQDAISKAANRKSRTPSPAPVPMEETPAPPDRPKSEEDAAALPPMELESKDVQGSSPHLRTSLSIEQPPTNTPPHMAYPRPIHPLFLETMYRGPTGSFPGFPSAPPPPGGATPESRLIPPLPPFAPPRGLPFLGSLMNGLSGARPGAGFDLLARPPLSAFPGVKPFQEAVMTPHHHHHHHHHHHVHGKMKDRYSCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHDKQRPFKCPLCERCFGQQTNLDRHLKKHEADDGSGVVSVADSPGSSNENEREDTYFDEIRSFMGKVTYGGESGYGLPHHPAYIPSRLHEINESKMEVEYDEDEDSEEGVSPLEETDGLSPIEAKESPSPSQYDLKLREKQELLNNNTAEPVIEIST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01407591;
90% Identity: iTF_00729533;
80% Identity: -