Tuni032965.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Temnothorax unifasciatus
Gene Symbol
-
Assembly
GCA_030770225.1
Location
JASTWK010001683.1:11230-13988[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 8.8e-05 0.014 17.0 4.3 1 23 262 284 262 284 0.99
2 12 0.65 1e+02 4.9 6.0 1 23 289 311 289 311 0.98
3 12 1.4e-05 0.0022 19.6 1.3 2 23 321 342 320 342 0.97
4 12 1.3e-05 0.0021 19.6 4.6 1 23 434 456 434 456 0.98
5 12 0.00025 0.04 15.6 1.3 1 22 461 482 461 485 0.91
6 12 3.1e-06 0.0005 21.6 0.4 1 23 524 547 524 547 0.96
7 12 1.7e-05 0.0026 19.3 2.4 1 23 578 600 578 600 0.99
8 12 0.0002 0.032 15.9 4.0 1 23 614 636 614 636 0.96
9 12 0.00019 0.03 16.0 4.7 1 23 642 664 642 664 0.98
10 12 0.00033 0.053 15.2 3.1 1 23 670 692 670 692 0.98
11 12 5.7e-05 0.0091 17.6 6.5 1 23 698 720 698 720 0.98
12 12 0.00027 0.042 15.5 0.3 1 21 726 746 726 747 0.93

Sequence Information

Coding Sequence
ATGCAGATCGACAGCGGGATGTTGACGCGGCTGAATCCGGACACCAGCCTCTGCCGCGTCTGCCTGACCGTGGACCACAACAACCAGTGCATCTTCCGCAGGAACTGGGACGGTCCCGACGACTCCTCCTCCGGGCTGTCGGAGAAGCTGCAGTTATGCTGCGGCGTGGAGGTCATGGAAGACGACGGCCTGCCCGCTAACATCTGCCTCGAGTGCGTGATGAAAGTCAACATCGCCTACGAATTGAGGAAACAATGTCAGAAAGCGGACGTTGAACTCAGGAAGCTGTACGGGAAAGCCTCGAGGACAGACGTCGCCGGCAACCGCATTCCTACAAAAGACCAATGTTGTCAAACTGAGCAATCTCTTATCTTGGGTGCAATCAATTCGGAGGATAATACAGAGCTAAGTGTGGACAGTAAAGTTAAAATAGAGAAGAATACCTTGCAATCAAATGTCATGAGACAAGGACAAATACCGGACGCTTTCGAACAAATCAAGCAGGATGTTCTAATAGACAGTGAAATGGATTTGGACTGCGGTAGTAGATATAAACAGGTAGAACATGACAAAATAGCTAAAAAGGATCTTTATAGAACGAGAAAATTAGCTATGTTTAAAAGGGTCACGTCTATAGAAAATTTGAAGAATTACAAGGAGAGACAGAGACGATATATCAAGAAGAGCGTGAACGTCAAACGCGAGAGCAGCGACGGCGAGTATCAGACGAATGCGAGAAACGCCCACGGCAGGATGGAGAGAACGTCCGAGCTcgaattacaatataaatgtcAGAAATGTGATAGATTTTATTCCAGTAAGAAGTCTTTAGATAGACACACGTCGACCCATAACGATAAAGAGTTCAAATGCGATAGCTGTGATAAGCAATTCTTCTGTCTGGATAAATTACATAAGCACGTTAATGTGCACAGAACGAAGGAGAAGCCGAAGCCGGTGTCGTGCAAGATCTGCAACAAGAGTTTCAGAAAGCTCGACACGATGGTCAGGCACCTGAATACTCACAAGAAGGCCTATCCCAAGGATGTTTTTTCCATTCTGAAAGAGATACGGGACAAGAGAAAGTTGGAAAATAATCCAGAGTCCTTTGAAACGCCACTTACGATGGACGAGGACGAAGAAACGCAGGCGCACGACGGTCAGTTGTACAGTGAGAACGACGGCACGACGAGGGAGCTGAGAAAACGTAACAATGCAAGAGTGGAACAAAGAGACTCGGATATGATGAACAGCGACTCCAGCGATGATAAAACCGAGTCGTTCGACGACGCGTCGCTCTTCCGCTGCAAACACTGCAGCAAGAGTTATCGTACCGAGAGGTCGCTCCAACGTCATCTGCTGGTACACGACGAGAAGAAGTACGTCTGCAACGTTTGCAACATGAAGTTCTTCCGACAGGACAGGCTCAAGAGCCACATGGATCGGTACGGTCACGACGAAACCAAGGCGTGCCCGGAGCCGCAAAAGCCGCCGGACGACAAGTCGGCCATCAAGCTGATAAACACCTGGATAAGGGAGGAGCTGGATTCCGATAACGAGGGCAAGGGCTTCCCGTGCGGAGTCTGCGGAAAGTCGTACGACACGAAGAAGTCCCTGATGAAGCATCAGATGAACGCGCACGGCGGACAAGACGAGGGCTGCGCGAGCTGCGATACCGTGTGCAATTGCGCGTACAAGGATCAGGAGAAGAGCAACGAGAAGTCGAAGCCGTACACCTGCGAGGAGTGTAACAAGTCGTTCGAGAAGGAGATCAAGCTGCACAGGCATCTGCGAATTCACGAGCGCGCCAAGGAGCAGCAGGACGCCAACTTCAAGCGTTTCCTCTGCCACATATGCAGCAAGACGTTCCGCCAGAACACCGGCCTCATGTTCCACATGAGGACGCACACGGGCTACAAGCCGCACGTGTGCAAGTACTGCGGCCGCGGCTTCACCTCCAACTCGAACTGCATCAATCACGAGAGGACACACACGGGCGACCGGCCGTTCGTCTGCCATTACTGTAGCGCCGCGTTTGCGAAATCGTGCACCCTCAAGGCCCACATCACCACGCACACCGGTGAGGCGAACTATCACTGCAAGACCTGCGGCAAGTCGTTCCGCCGACTCAAGTACTTGAAGGAGCACAGATTCACGCACACGGGCGAGAAGCCGTACGCGTGCAAGATCTGCGGCACCGCGTACAGCCATTCCGGCAGTCTGTTCGTTCACGAGAAGAAGTGCAAGGCCCAGTACAATAATTATCAGCCGGGGCTCCCGCAAAACGCGCAACAGCAGCAGGTTCCCTACGGTCAATCTCCGCAGACCACCATTGGCGGCGGCATTTCCATGGCGGCGTCCACTTCTTCGGTAGTCGCTCCTATCATCACTACGCTGCCTCAGGCTCATCTGAATGTCATCAACAGCACTCTGAATGTACAGGCGAACAAGGGCTACATGGACAATGTTCAGCGAATGAACGCACACGCGGCGGCTAACGCGACCACGGTCGTCTCCGCGTCGGGTCTGCACCCGAATGTCGACATCGCCGAGATGAGTTCCGCCGTGAGGAACTTTTCTATCATCGGTCAGATGTTTCACACTTAG
Protein Sequence
MQIDSGMLTRLNPDTSLCRVCLTVDHNNQCIFRRNWDGPDDSSSGLSEKLQLCCGVEVMEDDGLPANICLECVMKVNIAYELRKQCQKADVELRKLYGKASRTDVAGNRIPTKDQCCQTEQSLILGAINSEDNTELSVDSKVKIEKNTLQSNVMRQGQIPDAFEQIKQDVLIDSEMDLDCGSRYKQVEHDKIAKKDLYRTRKLAMFKRVTSIENLKNYKERQRRYIKKSVNVKRESSDGEYQTNARNAHGRMERTSELELQYKCQKCDRFYSSKKSLDRHTSTHNDKEFKCDSCDKQFFCLDKLHKHVNVHRTKEKPKPVSCKICNKSFRKLDTMVRHLNTHKKAYPKDVFSILKEIRDKRKLENNPESFETPLTMDEDEETQAHDGQLYSENDGTTRELRKRNNARVEQRDSDMMNSDSSDDKTESFDDASLFRCKHCSKSYRTERSLQRHLLVHDEKKYVCNVCNMKFFRQDRLKSHMDRYGHDETKACPEPQKPPDDKSAIKLINTWIREELDSDNEGKGFPCGVCGKSYDTKKSLMKHQMNAHGGQDEGCASCDTVCNCAYKDQEKSNEKSKPYTCEECNKSFEKEIKLHRHLRIHERAKEQQDANFKRFLCHICSKTFRQNTGLMFHMRTHTGYKPHVCKYCGRGFTSNSNCINHERTHTGDRPFVCHYCSAAFAKSCTLKAHITTHTGEANYHCKTCGKSFRRLKYLKEHRFTHTGEKPYACKICGTAYSHSGSLFVHEKKCKAQYNNYQPGLPQNAQQQQVPYGQSPQTTIGGGISMAASTSSVVAPIITTLPQAHLNVINSTLNVQANKGYMDNVQRMNAHAAANATTVVSASGLHPNVDIAEMSSAVRNFSIIGQMFHT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00765856;
90% Identity
iTF_00765856;
80% Identity
-