Basic Information

Insect: Temnothorax unifasciatus
Gene Symbol: -
Assembly: GCA_030770225.1
Location: JASTWK010002472.1:808235-821668[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 3e-06 0.00047 21.7 1.7 1 23 319 341 319 341 0.98

2 9 2.8e-08 4.5e-06 28.0 1.6 3 23 349 369 347 369 0.98

3 9 0.00022 0.035 15.8 0.4 1 23 375 397 375 397 0.98

4 9 1.2e-06 0.00019 22.9 1.5 1 23 403 425 403 425 0.99

5 9 2.1e-05 0.0034 19.0 1.7 2 23 539 560 538 560 0.96

6 9 2.7e-09 4.4e-07 31.2 1.6 1 23 566 588 566 588 0.98

7 9 0.00062 0.099 14.4 0.6 3 23 596 616 594 616 0.97

8 9 8.2e-05 0.013 17.1 1.4 1 23 622 644 622 644 0.99

9 9 0.018 2.9 9.7 0.8 1 23 650 674 650 674 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	3e-06	0.00047	21.7	1.7	1	23	319	341	319	341	0.98
2	9	2.8e-08	4.5e-06	28.0	1.6	3	23	349	369	347	369	0.98
3	9	0.00022	0.035	15.8	0.4	1	23	375	397	375	397	0.98
4	9	1.2e-06	0.00019	22.9	1.5	1	23	403	425	403	425	0.99
5	9	2.1e-05	0.0034	19.0	1.7	2	23	539	560	538	560	0.96
6	9	2.7e-09	4.4e-07	31.2	1.6	1	23	566	588	566	588	0.98
7	9	0.00062	0.099	14.4	0.6	3	23	596	616	594	616	0.97
8	9	8.2e-05	0.013	17.1	1.4	1	23	622	644	622	644	0.99
9	9	0.018	2.9	9.7	0.8	1	23	650	674	650	674	0.95

Sequence Information

Coding Sequence: ATGAAAACCCGTTGGGACCGATCGCACGGTCTCGCTGCGGCGCGACTCCACACCGATCAAGGCGCGCAGCCTGGTCAAGGTGAGCGTCGTCGGCCGAGGACTCTCGTGATCGTGCTCTTTGTGACCGAGAAATACAACGCCGGCAATCATACTGGCGCGCCCTACGTATTGTACAAAGATAACATGGAGAGACCCCAGGGTCAGTGGGGCCCGGGGCCGGGATCTCTCCAGGACGGTGGACTGTACccgcagcagcaacagcagcagcagcagcaacagggTTCCTCCTCGTCGGGAAGCCCACAGCAGGCCTGTGGACCTCCAGTCGAGGGCGGTGAAAGCGGTCCTCCGCCCTCGTTAGCCTCGCCCGTGCCCTCACCATATCCCTCGGCGCCTCCCGAGCCTCAATCCTTGACTTCGCCGGACGATGACATACAATCGAGTCAAGCCACGtcccagcagcagcagcaacaacagcaacaacaaACGCAGCAGCAGGtccagcaacagcagcagcagcaacagcaacaacaacagcagcagcagcagcaacaacagcaagTTCAACAACAACctcagcaacaacaacaaacGCAACAGCAAGATCACTCGCCGCAACAACAATTGACTCCTCACGCAGAGGTGGATCGCAGCGACTGCTTTCCCGGGGCCGGAGAGCTGCAGCAATATCCGCAGCATTATTTTAAAGAGGCCCGGCCGCACCCCTCACCGTCCGTACCGCCACATATGCTCACGCCCGGCGGCTTCTCCGCGCTGCACTATCTCAAGCAACCTGGAGTAATGTTGACGTCTCTCGGCCAAGGCGACGGTGGGCCCGGTCTGGACGCGCATCAGTACGCGAGTCCGGGCGCGCCGAATATGGCGACCGGGCTGCCAGACATCGTGCAGCAAAGCGGCAAATCGTCCAAGGCCGGCAACAGCGATCTACGTCTGTTCAAGTGCTTGACCTGCGGCAAAGACTTTAAGCAGAAGTCGACTCTGCTGCAGCACGAGCGGATTCACACAGACAGCCGGCCGTACGGGTGTCCAGAGTGCGGCAAGCGGTTCCGTCAACAATCCCATCTCACGCAGCATCTGCGCATACATGCTAACGAGAAGCCGTACGCTTGTGTATACTGCGAACGTACGTTCCGGCAGCGTGCCATCCTCAACCAGCATCTGCGCATCCACTCGGGTGAGAAGCCATACCAATGTCCGGAGTGCGGAAAACACTTCCGTCAGAAGGCGATCCTGAATCAGCACGTCCGCACACACCAAGACGTAAGCCCGCACCTCATCTTCAAGAACGGAATGACGCCGACCCTCTGGCCACAGGATGTTCCCTTTCCTCCCGAAGAGGGTAAGGAGGAGGTGGCGTCGACATTCGGCGACACGGACACGCAGTCGGGCGCGTTCAGTCCGGCGCCGGACGCCAACTCCATCCAGTATCCGGCATATTTCAAAGACCCAAAGGGCGGCAATCATGCGGTCTTTGGCGCGGGTGGTTCGAGCAGCTTCGGTGCCTTGCAGTACATCAAGCAGCAAGGTGGCACGAAAAGCTGTCTACCCGACGTGATACAGCACGGCCGCTCGGCTGGCATGCCGTTGTACGTGCGTTGTCCGATCTGTCAAAAAGAGTTCAAGCAAAAGTCCACGCTGCTGCAACACGGATGCATACACATCGAGTCACGGCCGTATCCTTGCCCGGAGTGCGGCAAGCGGTTCCGACAACAGTCCCACCTTACGCAGCATCTGCGCATCCACACGAACGAGAAGCCGTACGGCTGCGTGTACTGTGGACGTAATTTCCGCCAGCGCACGATCCTCAATCAGCATCTGCGTATCCACACCGGTGAGAAGCCTTACAAGTGCCAGCAGTGCGGCAAGGATTTCCGTCAAAAGGCGATCCTGGACCAGCACACGCGCACCCACCAGGGCGACCGGCCGTTCTGCTGTCCGATGCCCAACTGCAGGCGGCGTTTTGCCACCGAACCCGAGGTGAAGAAGCACATCGACAACCACATGAACCCGCACGCGGCCAAAGTGCGCCGGAACTCGAGCGGTGACACGAAGCCGCCCGGTACACCCGCGGGCTTGGGTCCGGTACCCGTGCCGCGCGGCCTCACGCCGACGGTCGTCAAGCCGGAGCTCTACTTTCCGCAGTGCTACGCGCCCGCGTTCAACCATCAGCCGCCGGTCTCCACCGCGCAATTCCCTGGCGCCCAGGCGAATGGCGTGTCCGTAACCGGCGAATTCAAGCCACCGACCGGTCTGCCGCCGCAGTGA
Protein Sequence: MKTRWDRSHGLAAARLHTDQGAQPGQGERRRPRTLVIVLFVTEKYNAGNHTGAPYVLYKDNMERPQGQWGPGPGSLQDGGLYPQQQQQQQQQQGSSSSGSPQQACGPPVEGGESGPPPSLASPVPSPYPSAPPEPQSLTSPDDDIQSSQATSQQQQQQQQQQTQQQVQQQQQQQQQQQQQQQQQQQQVQQQPQQQQQTQQQDHSPQQQLTPHAEVDRSDCFPGAGELQQYPQHYFKEARPHPSPSVPPHMLTPGGFSALHYLKQPGVMLTSLGQGDGGPGLDAHQYASPGAPNMATGLPDIVQQSGKSSKAGNSDLRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPYACVYCERTFRQRAILNQHLRIHSGEKPYQCPECGKHFRQKAILNQHVRTHQDVSPHLIFKNGMTPTLWPQDVPFPPEEGKEEVASTFGDTDTQSGAFSPAPDANSIQYPAYFKDPKGGNHAVFGAGGSSSFGALQYIKQQGGTKSCLPDVIQHGRSAGMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCVYCGRNFRQRTILNQHLRIHTGEKPYKCQQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHAAKVRRNSSGDTKPPGTPAGLGPVPVPRGLTPTVVKPELYFPQCYAPAFNHQPPVSTAQFPGAQANGVSVTGEFKPPTGLPPQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00684322;
90% Identity: iTF_00684322;
80% Identity: -