Basic Information

Insect: Temnothorax unifasciatus
Gene Symbol: -
Assembly: GCA_030770225.1
Location: JASTWK010000214.1:178633-180459[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0001 0.016 16.8 0.8 1 23 79 101 79 101 0.98

2 13 0.011 1.7 10.5 2.6 1 23 142 165 142 165 0.97

3 13 0.019 3.1 9.7 1.8 2 23 178 199 177 199 0.96

4 13 0.027 4.3 9.2 1.5 1 23 207 229 207 232 0.77

5 13 0.028 4.4 9.2 5.7 3 23 323 343 322 343 0.97

6 13 0.00027 0.043 15.5 1.5 1 23 352 375 352 375 0.97

7 13 0.045 7.2 8.5 4.1 1 23 390 413 390 413 0.96

8 13 4.9e-06 0.00078 21.0 1.2 1 23 419 442 419 442 0.95

9 13 0.016 2.5 10.0 0.8 3 23 449 470 447 470 0.94

10 13 0.00017 0.027 16.1 0.6 1 23 475 498 475 498 0.97

11 13 2.2e-08 3.5e-06 28.3 0.4 2 23 505 526 504 526 0.97

12 13 1.9e-06 0.00031 22.3 0.7 1 23 532 554 532 554 0.98

13 13 4.7e-07 7.4e-05 24.2 0.1 1 23 560 582 560 582 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0001	0.016	16.8	0.8	1	23	79	101	79	101	0.98
2	13	0.011	1.7	10.5	2.6	1	23	142	165	142	165	0.97
3	13	0.019	3.1	9.7	1.8	2	23	178	199	177	199	0.96
4	13	0.027	4.3	9.2	1.5	1	23	207	229	207	232	0.77
5	13	0.028	4.4	9.2	5.7	3	23	323	343	322	343	0.97
6	13	0.00027	0.043	15.5	1.5	1	23	352	375	352	375	0.97
7	13	0.045	7.2	8.5	4.1	1	23	390	413	390	413	0.96
8	13	4.9e-06	0.00078	21.0	1.2	1	23	419	442	419	442	0.95
9	13	0.016	2.5	10.0	0.8	3	23	449	470	447	470	0.94
10	13	0.00017	0.027	16.1	0.6	1	23	475	498	475	498	0.97
11	13	2.2e-08	3.5e-06	28.3	0.4	2	23	505	526	504	526	0.97
12	13	1.9e-06	0.00031	22.3	0.7	1	23	532	554	532	554	0.98
13	13	4.7e-07	7.4e-05	24.2	0.1	1	23	560	582	560	582	0.98

Sequence Information

Coding Sequence: ATGAGACTGTGGCAGCACGCTGATGCCGGTGGTAAACTGCGCTATTCGTTAATACCGATATCAGACGACGTCGATAAAGCTGAGGAAGATGTAAAGATACTTAATGTACTACCGTCAACCGCTATTAAAGTTAAAGAGGCCGAAGCTCAACAGAGCAATCAGAGAATCAGCGGATGCAGCGTCGGTAGTTGCATGAACTCCTTGATGCGTTTGCGCAAGATAGTCCTTGATGGTTATACTTGCgacaaatgtaatataaaatttcccATACAGTCTATGCTGAATCGCCACAAAATTTCGCACAATATGCATTTATGGCTTGATGGAAAACGCCTGAGAGAAAAGTATGTGCGATATTTAAAGACGAACATTCGAAGACAATCCAAACAGTTAAAGGTGCGAAAGCGTTTACAGAGAGCAAAGTATGTTTGTGCATTTTGCGATTTCGATTGTAATAGATTGACGACTTTGAATGCgcatttaaagaaaaagcaCAAGAAAAACACGGCCAAAAAAAATCCGAAGAAGCTCAGGTGTATGATCTGCAGTTACGAGTGTTTGAGTGAAGCGAATCTGAGCAGGCACATGCGAAAGCACAAGAACAAGAATATGTCGAGTTTTGCTTGCAACATATGCGATTTTGAATGTAAAAGGGGTTTTACTTTGATGTCTCACTTGGAGGGTCATAAGAGATCTAAGAAAAATTCAGACGCGAGCTGTGCGGAAAAGAAACGTAGAATAACGAAGTGTAACTACACATCTCCGAAGAAGACAAATCAATCGGATTGCTCGCAAAGCCGCGGGACGCCTAAGAGGGCTGCGTTAATCTCATACGAGGATTCCAACTTGGTGGTAATTAAACAGGAAGTTGAAAGTGTCGAGGAACGCAACGAGACATCGGCGATCGCCGTCGACGTCCCCAGTCAGAAAAAGCCCAGTCAGAAGAGGCCGGCCGTCGAGGAACACTGCGACCTCTGCGATTTCACGTGCGCGAAGAAGAGCACGCTGTACGCTCACAAACGCCGGCACAAGGTGGAGAATGTCAACGAGGTGTTCGCGTGCAACGAGTGCGGCTTCAAGACTGCCAAGAAGTCGTCGCTGTACTCTCACATCAAGCGGAAGCACAAAGAGTCACGGCCCTGTGATGGCAACGCGCAGCCGGAATTGTTCTGTTGTACCCAGTGCGACTATAAGAACAAGAACAAGTATGAGTTGAAGATACACATCGCGCGCAAGCACACGGACGACTTCAAATTCTCCTGCGAGACCTGCGGTAAGAAGTTTAAGGTCAAGGGCGATCTGACGAATCATGTACGTTTCAGCCACCGGGAGCAGCCGGTGATCTGCGACGTTTGCGGCAAGACTTGTCTCAATAGCAACTCCTTGTACGTGCATCAGAAGTTTGCGCACTACAAGGCCAAATACGAGTGTCAGATATGCAAGAGGCGGATGGTCAGCCAGGAGAACCTCAATGAGCACATGCTCAAGCAGCACGAGCGCAGGGAGAACGTGGTGTGCGAGGAGTGCGGCAAGACGTTCTCGCGGAACAGCAGACTGAAGGTGCACATGAGGATCCACACCGGGGACAAACCGTACAGCTGTACCGTCTGCAGCAAGTCCTTCGCCCGCAGGACAGCTCTCAAGCAGCACCTGCTTATCCACACTGGCGTCAGGCCGTACGTGTGCGATATCTGTGGCAAGGCCTTCACTCAGAAGCCGGGTCTGATCAGTCATAGGAAGTCACATCCGGGTTCTCACCCGCCTCTGCCGCGCGTCCTCATCGATCATATATTGAACGACGTTATGAACGGTTCACGCGGTGATTGA
Protein Sequence: MRLWQHADAGGKLRYSLIPISDDVDKAEEDVKILNVLPSTAIKVKEAEAQQSNQRISGCSVGSCMNSLMRLRKIVLDGYTCDKCNIKFPIQSMLNRHKISHNMHLWLDGKRLREKYVRYLKTNIRRQSKQLKVRKRLQRAKYVCAFCDFDCNRLTTLNAHLKKKHKKNTAKKNPKKLRCMICSYECLSEANLSRHMRKHKNKNMSSFACNICDFECKRGFTLMSHLEGHKRSKKNSDASCAEKKRRITKCNYTSPKKTNQSDCSQSRGTPKRAALISYEDSNLVVIKQEVESVEERNETSAIAVDVPSQKKPSQKRPAVEEHCDLCDFTCAKKSTLYAHKRRHKVENVNEVFACNECGFKTAKKSSLYSHIKRKHKESRPCDGNAQPELFCCTQCDYKNKNKYELKIHIARKHTDDFKFSCETCGKKFKVKGDLTNHVRFSHREQPVICDVCGKTCLNSNSLYVHQKFAHYKAKYECQICKRRMVSQENLNEHMLKQHERRENVVCEECGKTFSRNSRLKVHMRIHTGDKPYSCTVCSKSFARRTALKQHLLIHTGVRPYVCDICGKAFTQKPGLISHRKSHPGSHPPLPRVLIDHILNDVMNGSRGD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00129188;
90% Identity: iTF_01408474;
80% Identity: -