Basic Information

Insect: Temnothorax unifasciatus
Gene Symbol: -
Assembly: GCA_030770225.1
Location: JASTWK010002476.1:1139674-1150903[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 6.2e-05 0.0098 17.5 1.4 1 23 456 478 456 478 0.96

2 18 2.2e-05 0.0035 18.9 1.9 1 20 484 503 484 506 0.94

3 18 1.5e-05 0.0024 19.4 1.4 1 23 512 534 512 534 0.98

4 18 8.9e-05 0.014 17.0 4.4 1 21 540 560 540 562 0.95

5 18 1.2e-05 0.0019 19.8 5.6 1 23 568 590 568 590 0.99

6 18 2.8e-05 0.0044 18.6 5.3 1 23 596 618 596 618 0.97

7 18 0.0001 0.017 16.8 6.9 1 23 624 646 624 646 0.96

8 18 1e-07 1.6e-05 26.3 2.7 1 23 652 674 652 674 0.98

9 18 7.6e-05 0.012 17.2 6.7 1 23 680 702 680 702 0.97

10 18 2.3e-05 0.0037 18.8 5.8 1 23 708 730 708 730 0.98

11 18 4.9e-07 7.7e-05 24.1 2.8 1 23 736 758 736 758 0.98

12 18 9.3e-06 0.0015 20.1 7.8 1 23 764 786 764 786 0.98

13 18 2.9e-05 0.0046 18.5 9.1 1 23 792 814 792 814 0.98

14 18 3.8e-05 0.0061 18.2 7.5 1 23 820 842 820 842 0.98

15 18 0.0018 0.29 12.9 8.8 1 21 848 868 848 870 0.94

16 18 1.4e-05 0.0022 19.5 0.4 1 23 876 898 876 898 0.98

17 18 0.034 5.3 8.9 4.5 1 23 908 930 908 930 0.98

18 18 5.4e-07 8.6e-05 24.0 1.3 1 23 936 958 936 958 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	6.2e-05	0.0098	17.5	1.4	1	23	456	478	456	478	0.96
2	18	2.2e-05	0.0035	18.9	1.9	1	20	484	503	484	506	0.94
3	18	1.5e-05	0.0024	19.4	1.4	1	23	512	534	512	534	0.98
4	18	8.9e-05	0.014	17.0	4.4	1	21	540	560	540	562	0.95
5	18	1.2e-05	0.0019	19.8	5.6	1	23	568	590	568	590	0.99
6	18	2.8e-05	0.0044	18.6	5.3	1	23	596	618	596	618	0.97
7	18	0.0001	0.017	16.8	6.9	1	23	624	646	624	646	0.96
8	18	1e-07	1.6e-05	26.3	2.7	1	23	652	674	652	674	0.98
9	18	7.6e-05	0.012	17.2	6.7	1	23	680	702	680	702	0.97
10	18	2.3e-05	0.0037	18.8	5.8	1	23	708	730	708	730	0.98
11	18	4.9e-07	7.7e-05	24.1	2.8	1	23	736	758	736	758	0.98
12	18	9.3e-06	0.0015	20.1	7.8	1	23	764	786	764	786	0.98
13	18	2.9e-05	0.0046	18.5	9.1	1	23	792	814	792	814	0.98
14	18	3.8e-05	0.0061	18.2	7.5	1	23	820	842	820	842	0.98
15	18	0.0018	0.29	12.9	8.8	1	21	848	868	848	870	0.94
16	18	1.4e-05	0.0022	19.5	0.4	1	23	876	898	876	898	0.98
17	18	0.034	5.3	8.9	4.5	1	23	908	930	908	930	0.98
18	18	5.4e-07	8.6e-05	24.0	1.3	1	23	936	958	936	958	0.97

Sequence Information

Coding Sequence: ATGAATAGTGAGCAGCATGCATTGCCAGCGACTACGCAGGCACAACAAGAGGATGTAAACGCGGGTCAAAGTGGTCGTCCTTCATACCCAGGTGGTTTGGCTACTGCGACCGCGAGTCTTGGCAATGTAGGGAGTACTCCCCATTCATCCGCGGACCTGCGCGTAGGTACTGCCGTAGCGTTAGCCTCCTCGGTAGCCTCCTCGGTAGCTAAGTATTGGGTCCTCACCAATCTGTTTCCTCCCGGACCGCTACCTCAAGTCTCGGTCTACCACCATTCCCACCACAACTCCTCGCATAGGAGTGGTGGCGGTGGGGAGGCATCATCCTCCAAAGAGCCAGCCTCTTCACTGAACCAGGAAATGGCGTTGACTTCCAGCTCGCATCATCAGCAACAGTCAACAGCCGcgcatcatcatcatcagccTTCAgttagcagcagcagcagccacCACAGTTCCCTGCAGTCGAATCCACAGATTCCTGTATCTCTTCCTGGCCTTAATTTAGACGGCGCACATATACCAGCGAGTGTCAGTCATCTGGCTGCACATGCACAAATGCAACAACAAATGCAGGCGCAAGCACAGCAGCAGCTGCatcagcagcaacagcagcagccgcagcaacagcagcagcagtctCATCATCAGATGCCGAATCATCAGAACGCTCAGAACAATGGGCCGACGGCGCATAGCCAGAACGCGCAGCGAGACGACAACAAAGTTAAGGACGAGGGCGGTAGTTGCACCACCGAGCGTTGCAGCGACAATCAGGTTCATTGTCAAGTTCAATGCGATCTGCAATTACAACCACCCCAAGATCTTCAACAGAGCTTGatgcaacagcagcagcagcaacaacagcagcagcaacaacagaTCGGGGTCAACATCAGCGGTAACTCCACTACCGAGGGAGGAAGCCAGAACAACTCCGAGAAACccgagaaagagaaggagttGCGACAACTGAATATGACCCAATTTCAAGTCCCTGACTTGAAACCAGGGGGACACATGATGGACGTGAGGACAGCAGACGGATCGGTTGTTAAAATCAGCGCGGGAAACGAGCAAGATTTGGCCAAGACTCTCGGCGTCGAAATGGTACAAAATATGTACAAGGTTAATGTGGAAGATATTAACCAACTCTTGGCGTATCACGAGGTTTTTGGAAAGCTGCAGAGCGAGATTGCAGCTGGAACGACTTTGGTGGGCAGCACTGTGCCTACACAGACAGTTACCACGATACAGAATGGCACGCCAATCGTGCAGCAGGTCCAATTGAACAAATTCGATATAAAGTCGAGCGACGGCGAAGCAACGCCTGGCCCGAGCGCATCGCCCGTGTCGGTTGGCAGCCACGCTTGCGAGATATGCGGAAAGATCTTCCAGTTTCGTTATCAGCTTATTGTACATCGCAGATATCATACCGAGAGAAAGCCATTCACGTGTCAGGTATGCGGCAAAGCGTTCTCAAATGCGAACGATCTAACACGTCACGGCAAATGTCATCTAGGAGGATCCATGTTCACCTGCACCGTTTGCTTTCACGTCTTTGCGAATGCGCCTTCGCTGGAACGTCATATGAAGAGACACGCCACCGACAAACCGTACAATTGCACGGTCTGCGGTAAGAGTTTCGCGCGCAAAGAGCATTTGGATAACCACACGAGATGTCATACTGGCGAGACGCCATACAGATGTCAATACTGTTCGAAGACATTTACCCGAAAAGAACATATGGTAAATCACGTTCGCAAACACACTGGTGAGACTCCACATCGATGTGATATTTGCAAGAAGAGCTTTACTCGCAAAGAACACTTTATGAACCATGTTATGTGGCATACAGGAGAAACCCCTCATCATTGCCAAGCTTGCGGCAAGAAGTATACGCGCAAAGAGCATCTCGCTAACCATATGCGCTCGCACACAAACGACACGCCGTTCCGTTGTGAAATATGCGGTAAGTCGTTTACGAGGAAGGAGCACTTCACGAACCACATAATGTGGCATACGGGCGAGACGCCGCACCGCTGTGACTTCTGCTCGAAGACGTTCACGCGAAAGGAACACCTCCTGAACCACGTTCGCCAGCACACGGGTGAGTCTCCACACCGATGCGGCTTCTGCTCCAAATCGTTCACCAGAAAGGAACACCTTGTTAACCACATCCGCCAACACACAGGGGAGACGCCCTTCCGCTGTTCGTACTGTCCGAAAGCATTTACGCGGAAGGATCACCTGGTGAACCACGTCAGGCAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACCAAATCCTTCACGCGGAAGGAACATTTGACCAATCACGTGCGTCAACACACAGGCGAATCGCCACACCGATGCCACTTCTGCTCCAAGTCATTTACTCGTAAGGAGCATTTGACGAATCATGTGCGCATCCACACTGGCGAATCTCCACATAGGTGTGAGTTTTGCCAGAGGACGTTCACTAGGAAAGAACATCTAAATAATCATCTCCGTCAACATACCGGAGATTCCTCACACTGTTGCAACGTATGCTCCAAACCATTCACAAGAAAGGAGCATCTCGTGAATCATATGCGTTGCCATACTGGTGAACGTCCGTTCGTGTGCACAGAATGTGGCAAGAGTTTCCCGCTGAAGGGCAATCTCCTCTTCCATATGCGCTCGCACAACAAGGGCAGCAACGCCGAGAGGCCGTTCCGCTGCGACCTGTGCCCCAAAGATTTCATGTGCAAAGGACACTTAGTCTCGCACCGGCGCTCGCATTCAGACGAGCGGCCGCACAGTTGCCCGGATTGCGGCAAGACCTTCGTCGAGAAGGGCAACATGCTGCGACACTTGCGCAAACACGCGGCCGAAGGCCCACCGACACAAGTTAGCACACCGTCGGCCATACCGCAATCCGGTGTCCTGCCGATACCGGCAGCGGCGGCAGTCCTGGTTGGACATCCATTAGCACCGCCGGCGCCGCCTGTTGTGCCGCAACATACGGTGGTCGTGCCGACACCGCCCGGTGTCGGATTGGCGTCGTACTAG
Protein Sequence: MNSEQHALPATTQAQQEDVNAGQSGRPSYPGGLATATASLGNVGSTPHSSADLRVGTAVALASSVASSVAKYWVLTNLFPPGPLPQVSVYHHSHHNSSHRSGGGGEASSSKEPASSLNQEMALTSSSHHQQQSTAAHHHHQPSVSSSSSHHSSLQSNPQIPVSLPGLNLDGAHIPASVSHLAAHAQMQQQMQAQAQQQLHQQQQQQPQQQQQQSHHQMPNHQNAQNNGPTAHSQNAQRDDNKVKDEGGSCTTERCSDNQVHCQVQCDLQLQPPQDLQQSLMQQQQQQQQQQQQQIGVNISGNSTTEGGSQNNSEKPEKEKELRQLNMTQFQVPDLKPGGHMMDVRTADGSVVKISAGNEQDLAKTLGVEMVQNMYKVNVEDINQLLAYHEVFGKLQSEIAAGTTLVGSTVPTQTVTTIQNGTPIVQQVQLNKFDIKSSDGEATPGPSASPVSVGSHACEICGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFSNANDLTRHGKCHLGGSMFTCTVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCSKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQACGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCSYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCSKPFTRKEHLVNHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSNAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGPPTQVSTPSAIPQSGVLPIPAAAAVLVGHPLAPPAPPVVPQHTVVVPTPPGVGLASY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00899003;
90% Identity: iTF_00014883;
80% Identity: -