Basic Information

Gene Symbol
cdc5l
Assembly
GCA_030770225.1
Location
JASTWK010002481.1:324781-326541[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.3e-17 8.8e-14 52.6 1.9 1 46 7 53 7 53 0.97
2 2 3.9e-09 8.1e-06 27.1 0.1 1 41 59 98 59 100 0.94

Sequence Information

Coding Sequence
ATGCCGCCAATTAGGATAAAGGGTGTATGGACAAACACAGAAGATGAAATCTTAAAAGCGGCTGTAATGAAATATGGCGAAAACGAGTGGAGCCGTATTGCATCGCTGTTACACAGAAAATCGAGGATGCAATGTGAGGCGAGATGGTACGAGTGGCTTAAACCAACCATAAAAAAGACTGAGTGGACTTGTGTAGAAGACGAAAAATTGCTTTACCTTGCGATGTTAATGCCTACTCAATGGCAAACTATCGCACTTATTATCGGTCGGACAATTAAGCAGTGCTTGGAACGACGTGAATATTTACTTAATCAAGcgcaaaagaaagaagaaggagacGATGAAGCTGATGACCCTCGAAAACTTATACCTGGCGAAATATATCCCAATCCAGAGACAAAGCCAGCAAGACCGGACCCTAAAGATATGGATGAAGATGATCAGTTGCAGCAGTGTCAATTAAATGATATGTCGTCTTAG
Protein Sequence
MPPIRIKGVWTNTEDEILKAAVMKYGENEWSRIASLLHRKSRMQCEARWYEWLKPTIKKTEWTCVEDEKLLYLAMLMPTQWQTIALIIGRTIKQCLERREYLLNQAQKKEEGDDEADDPRKLIPGEIYPNPETKPARPDPKDMDEDDQLQQCQLNDMSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01409030;
90% Identity
-
80% Identity
-