Tuni015234.1
Basic Information
- Insect
- Temnothorax unifasciatus
- Gene Symbol
- -
- Assembly
- GCA_030770225.1
- Location
- JASTWK010000314.1:12656-13168[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.5e-09 8.3e-06 26.7 0.0 3 39 17 52 15 59 0.86 2 2 8.6 7.4e+03 -2.0 0.0 23 31 102 110 102 110 0.86
Sequence Information
- Coding Sequence
- aTGCCTCGTTGTAGACGAAGAAAAACTAAAAGAGGAAAATGGTCCTCAGACGAGCTCAGAGCAGCTATCAATGCAGTAAAAGCTGGAATTCCCATTCGTCAGGCTGCAACTGCATCGAACATTCCCTTCAGCACTATCCAGCAGAGACTCAAGACCGGAGACAATTCCTCAGAGCCAAGAATGGGTCGAAAGCCTGTTTTTACAGCAGCCCAAGAAGCTGCATTGGCTGAAACTTTAATAAAGTTAGCGAAAGTGTTTTACGGACAGACACCTCTTCAAGTGCGCTGCGCAGCATTTGAGTTTGCTAAACGCCACAACATCcccaataattttaataaagaaaaaaggtgTGCTGGCGTAGATTGGTTCTATGGATTCCAAGCTCGTAATCCGTCAATCAGCGTGAGGAAACCAGAGGCAACAAGCCTCAATCGTGTAACGGCATTCAATCCGGAGGCTGTAAAAATGTTCTTCGATAACCTGAGGATCGTGATGGCATACGTGATGGCGTGA
- Protein Sequence
- MPRCRRRKTKRGKWSSDELRAAINAVKAGIPIRQAATASNIPFSTIQQRLKTGDNSSEPRMGRKPVFTAAQEAALAETLIKLAKVFYGQTPLQVRCAAFEFAKRHNIPNNFNKEKRCAGVDWFYGFQARNPSISVRKPEATSLNRVTAFNPEAVKMFFDNLRIVMAYVMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -