Tuni013524.2
Basic Information
- Insect
- Temnothorax unifasciatus
- Gene Symbol
- -
- Assembly
- GCA_030770225.1
- Location
- JASTWK010000254.1:203084-204901[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 2e-11 1.7e-08 35.3 0.1 1 38 14 50 14 55 0.89 2 5 1.6e-09 1.4e-06 29.1 0.1 2 38 68 103 67 106 0.93 3 5 3.5e-07 0.0003 21.7 0.1 2 39 121 157 120 161 0.90 4 5 3.1e-10 2.7e-07 31.4 0.0 2 38 175 211 174 216 0.91 5 5 9.6 8.3e+03 -2.2 0.0 17 27 514 524 511 524 0.87
Sequence Information
- Coding Sequence
- atgatacgaAATTATAAGAAGACTGAAGAGCAGAGCTGGTCTGAGGAAAGCATGGCTGCAGCAATCAATGATGTTATGAAGGGAACAAGCCTCAGAAAAGCTGCTGAAACTCATAAGGTTCCTTTTTATACTCTACACTATAGGATAAAGAAAGCTAAAAAGGAAGGTCTGTCTTCTGCCCAGAAAAAGAAGAGCTGGTCTAAGGAAAGCATGGCTGCAGCAATCAAAGATGTTATGAAGGGAATAAGCCTCAGAAAAGCTGCTGAAACCCATAAGGTTCCTCTTTATACTCTACAATCTAGGTTAAAAATAGCTAAAAGGGAAGGTCTGTCTCCTGCCCAGAAAAAGAAGAGCTGGTCTAAGGAAAGCATGACTGCAGCAATCAAAGATGTTATGAAGGGAATAAGCCTCAGAAAAACTGCTGAAACCCATAAGGTTCCTCTTTATACTCTAAAATATAGGATAAAAAAAGCTGAAAGGGAAGGTCTGTTTTCTGctcagaaaaaaaagaactgcTGGTCTAAGGAAAGCATGGCTACAGCAATCGAAGATGTTAATAAGGAGAAAATGAGCATAGAAAGAGCTGCTGCTTTCCATAAGGTTCCTGGATCTACTTTGCACCGTAGgataaaaaaagttgaaagaGAAGGTCTTTCTCCTTTAGAAGCTGCCTCGAAAAGGttaagcaataaaattttctcagaGGCTCAGGAAGAGGAACTTGTGCAACACATATTGCTTTTTGAAGAAAGTTTATTTGGCCTCACTTtaacagatataaaaaaattcgcaTTTGAATTTGCTGAAGAGAACAACATTCCACATATGTTCAACAAGGAAAAGGAAAGAGCAGGGAGACATTGGCTCTCTGGTTTCCTCAGCAGGCATAAGCAATTAtcgcaaaagaatttttttcctgCAAGCGCGAAGGGCTCTAACCGTACAGCAgttaaatcattttttgatttattagagtctgtttataataaataccaCTTTTCAcgtaataacatttatattgttaatgaAACGGGCATTATAATAGTACCAAACAAATCGTCAAAAGTACTAGCTCTGCGTAGAGGAAAGCAAGACTCATTATCTTCCAGTGAAGAAGTTCTCGTTACTGCTGAGACATGTATGAATGCTGATGGTGATTATATGCCTACAATGTTTATTTTCcctagaaaaaaagtaaaccTTCTGTTGATGAATAATGCTCCTCGCGACTCATTTGCCGTCTATCACGAGAGTGGATTGATTCAGAAAGACAGTTTTATTACTTGGTTCAAGAAATTCATTGAGTTTTCTTGTCCCCAACTTGAAAAGCCGGTGCTTTTACTTCTAGATGGACACGCTTCTCATACCAAAAGTATGAAGTTTATCAAACTTGCACAAGAAAACAACGTCATCATCTTGTCCTTCCCTCCGCATTGCACACATTGGTTGCAGCCACTTGAGGTATCATTCATACCTCCTTTGATGACATATTATGAAGAAGAGGTGCAAGAATGGCTAACTGATCACCCAGGACGACATGTAACAATATGTAAAGTGGCGAAACTATACGGAAAAGCTTTTTTTAGAGCAGCTGAAAGAGAAACGGCTATAGATGGTTTTGAAAAATCGGGAATATACCCGTTGAATAAAAACGTGTTGGCCGATCTTAATGCTCCATCAAAAACCATTGAAAAACCTATGCAGCAGGAAATCCAAGATGATGAGACCCAATCTGTGATATCTGGAAATGATCAAATCCACCCGTCAACATCTGCAATTTCCATGATTTTCTCTtcccaagaagaaaaaaatttttag
- Protein Sequence
- MIRNYKKTEEQSWSEESMAAAINDVMKGTSLRKAAETHKVPFYTLHYRIKKAKKEGLSSAQKKKSWSKESMAAAIKDVMKGISLRKAAETHKVPLYTLQSRLKIAKREGLSPAQKKKSWSKESMTAAIKDVMKGISLRKTAETHKVPLYTLKYRIKKAEREGLFSAQKKKNCWSKESMATAIEDVNKEKMSIERAAAFHKVPGSTLHRRIKKVEREGLSPLEAASKRLSNKIFSEAQEEELVQHILLFEESLFGLTLTDIKKFAFEFAEENNIPHMFNKEKERAGRHWLSGFLSRHKQLSQKNFFPASAKGSNRTAVKSFFDLLESVYNKYHFSRNNIYIVNETGIIIVPNKSSKVLALRRGKQDSLSSSEEVLVTAETCMNADGDYMPTMFIFPRKKVNLLLMNNAPRDSFAVYHESGLIQKDSFITWFKKFIEFSCPQLEKPVLLLLDGHASHTKSMKFIKLAQENNVIILSFPPHCTHWLQPLEVSFIPPLMTYYEEEVQEWLTDHPGRHVTICKVAKLYGKAFFRAAERETAIDGFEKSGIYPLNKNVLADLNAPSKTIEKPMQQEIQDDETQSVISGNDQIHPSTSAISMIFSSQEEKNF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -