Basic Information

Gene Symbol
ARID5B
Assembly
GCA_030770225.1
Location
JASTWK010000358.1:55338-65245[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.6e-23 1e-19 71.9 0.0 1 89 233 319 233 319 0.95
2 2 6.6 2.6e+04 -3.1 0.0 6 32 684 711 681 713 0.70

Sequence Information

Coding Sequence
ATGAGACAAAGATGGAGAGACGAGGTGCTGACAATTTCAGAAAAGGTAGTCGTCCGCGTGCACGACCTAGTCACATGGCTCTCACCTACGTTGGAGTGGTCGTCGGGCCGAGAGGTGTCCTATCCGACGACCCCGATGTCGTCCCCCGAGACCAGTCCGCTCAGATACGAGATGCCGCAGCCGCAGGTGCTGACGGACCCGGGGATCGACTTCTCGGACGTCGAAAAACAACAAAAGGAGTACGAGAGCAATCTGAACTCGTCGAAGAGACCGGACAGTTTCCAGACGAAGGTGGTGGTACTCTCGTATCCCAGGTACTGTCGCTATCGGGCACTACTACGTAGACTGGAGGGTGCCGAGCCCTCCTGGCTGTGCTCGTCCATCGCGGCCGCGTTAGGGGGCTTCACCGCGACGCCGGGCACCAGGGTGCTCTTCTGCAGGGACACATTCGACTATCCGGATCTCGAGACTCACGAGCTGCTGTGTAATCACTTGGCACCGAAGCTAAAAGGCAGACCACGAAGAAAGCGTAAAAAGCGCAGCGCTTCGCCGGGTGAGTCCTCGAACGAGAGCGAGGCCTCGGTGGCGTCGACGTCGAAGAGCACGTCGGCGATCACCAGCACTAGCCTGGTGATACCCACGGTCGGGAGGCCGCCCTCGTCCGGGGTACGGCGGAGCGAGAGGAAGACCAGCGCGGAAGAAAAGAAGTTTATCACCGACGTGCAGAGTTTTATGAACTCTCGGGGTACGCCGGTCGGAAAGATGCCACTGCTGGGCTACAGGCAGATCGATCTGTTCCTGTTCTACACGAAAGTGCAAATGCTCGGTGGTTACGACTCCGTCAGCGCTGGTCGCATGTGGAAGACCATCTACGACGACATCGGTGGCAACACAGGTTCCACTAGCGCGGCAACTATTACACGTAGACATTATGAAAGGTTATTATTACCTTATGAAAGGTATCAGCGAGGCGAGGAGACAAAAGTGAGATTGAATCACGGACGACGTACCAAGAGTATAGGCGTGTCCGATGATTTAGATATCAAGGAGGAACCGAGTGATCTGTACATGTCGGAAACACCTCCGCCTATAGATGCAATTCCCGCGATCACAACACCGCCCTTACAACCAATAATGTCAGCAACAACAACGACTTTACTCTCGAGTGAGAAACCGAAATTAGAAACCGGCAAGACGTCCTCATTACGTAGCGTGCGAGTGAAGCCGGAACGCCTGAAGTCCTTGAATACAATAATCGCCAATAACGCGACACCTTCCAGCCAGCAAGCTAGCCAACTGCCAAGTCCACCGCCATCCTCCAATACGTCTATCTCAACGCCCAATAGCACACCCTCCACAACGCCGACGAATGGTACCAGTAACAATCAGAGTGTCTTAGAGAGGCAGCTCAACAGTCCTTTAATTTCCCAACAAGTTCCACCATCGTGTTCGCCACCAGGCTTGCCCGTGACCAGTGTAGCGACAAACGCGTCGACGGTTGTCACTTTAACGCCTCCACCTGAGAAGGATATGAAGGAGATCAAGTTGGATTCCAAGCAGACGACGCTACTGGCGCAGGGCAAGGAAAATATACCACTGTTCGGCGGCGAGAAATTCGCggaaaaaacaataataccTCCGGTCTCCAGATCGCCCGAAGTGATTGATCTTGAAAACGAGAGCGACACGAGTCGAGACAAGATAATTATTCCCAGCTTCAAAAAACGCAAGCTCGAGATTTTGCGCGAAGGCGGTCTCGAAGTCACCGCTGTCGATCTGGACGCACGACCGAGCGTGATTCAGGCCAACGTCTCCATGTCGCCGCAACaccaacagcagcagcagcaacaacaacagcaacaacaacaacaacctCTGCCGGCCACAATGAAGTCCACTGAAGAGAAGCAACCGTCGATCTCGCCGTATCCGCCTCCAGTCACGCCGAATTCCATTCCTAAGTTGATTTCCGTCACTGTGACGCCCGACATAGGACACATGTTACCGTCACCGCACGACCATCAAAATCATCAGCCGCGAATATCAGTGGTCAAACAACTACCGGCTCATCATAACAATAACAACATCAGCATGATGAACAACAATAATGTGACGAACAGTCGGGTGATAAATCTTGGTAACTCGAATAATACTGCGCTGTTGCAGTTGTATGCGAACGCGAACGTCGCACCATCGACAATTCCGTCTGCGCAGCATCCAAACCACCGTTTTGTTCCGCCAAATATTCCAAATGGCAGGTTATTACCACCAAAGGTGACACAGTCGAGGTCGATATTTGTGCACAACGAAAGGACGGTTTATGGAAATCCTAAGGATATTCTTAGCTCTCCACCAAAATATCGCTTGCCGCATCCACATCTACATCCGCATCCTCATCCGCATCCGCATCAACAGCAGCAGCCACCGCAACCACAACAACGCTCACAACATCCGCAAATGAGCTCTAGCAACGACATCGGACAAGGAGGTGTTCTCGATCTGACGCAAAAGTCTGACGAGAAACCGACGTTCCCTAGGCCCAGTCTAGAAATAGTCAGAGTACCTGTAGTACAGAGGCCTAATCCGTTAAATCTGGACGTGCGGAATTCGCCGGTCAAGGACAAACCGTCGGACAGACCTGCCGCCGACTGTCCAAAACGTGTACCCTTCCCCGTCTACCAAAATGTAATCGACAGTCGAACTATCGCGTCGAATAACCTCGAGATTACGTTAGTGAATCCCAAGCACAAAAACAATCATCACCTCATGCCGCCTCACGTCCAAATACCAAGTCCACCTAATAAGAGCAATGCGATAGGAGTGATAAGTAGCGCGCAAAGGAGGCAGCAACAGCCGCAACAACAAATGAATGGAAAGTATACGGTGAGAAGCGAGCCGGTTTCGCCATACACACCGAGGAAGACGAGTCATCCCATCATACCGAACGTACCCAATTTGAATCACCTGAATCACAGTGGGAGTCCATTTCCCAGAATGCAGGCAACGACGTtacaacaacagcagcaacaaaTGAGCATTGATAGGAGGAAAGCGGCTGCGGAGGCCGGCAGGGATCATCAACATCGTAGGATCAGCGAGGGCGAGAAATCATCCTTGGCagcgcagcagcagcagcagcagcatcaGGAATCCAGGCAGAGCGAGGCCGGACGACGGCACAGTTTACCCAGCATACCGTCGGGTTTCGTGCCGACGGTACCGCAAAACAACTCTACCGCCTATCCGATGCCGCAACTGCCAAACGCGTCCGGCAAGTTCCTCCCAATTCTGGACCCCATGTACTACTCGTTCTATAACGGTCTGTTCCCACCACCGATTCCGCCCACGGCCGCAGCCGCTGCCGCTGCATCGTCGTTTTTACCGCCGGAATTTAGCGCGTATTACAAGGAATTACTCGCTTCCTCGCAACCAAGACTGACGGGGATGATGGGGCAGCCGCCGCCGCATCAACAGCCGGCCGCCCCAACGTCTAAGTAA
Protein Sequence
MRQRWRDEVLTISEKVVVRVHDLVTWLSPTLEWSSGREVSYPTTPMSSPETSPLRYEMPQPQVLTDPGIDFSDVEKQQKEYESNLNSSKRPDSFQTKVVVLSYPRYCRYRALLRRLEGAEPSWLCSSIAAALGGFTATPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSASPGESSNESEASVASTSKSTSAITSTSLVIPTVGRPPSSGVRRSERKTSAEEKKFITDVQSFMNSRGTPVGKMPLLGYRQIDLFLFYTKVQMLGGYDSVSAGRMWKTIYDDIGGNTGSTSAATITRRHYERLLLPYERYQRGEETKVRLNHGRRTKSIGVSDDLDIKEEPSDLYMSETPPPIDAIPAITTPPLQPIMSATTTTLLSSEKPKLETGKTSSLRSVRVKPERLKSLNTIIANNATPSSQQASQLPSPPPSSNTSISTPNSTPSTTPTNGTSNNQSVLERQLNSPLISQQVPPSCSPPGLPVTSVATNASTVVTLTPPPEKDMKEIKLDSKQTTLLAQGKENIPLFGGEKFAEKTIIPPVSRSPEVIDLENESDTSRDKIIIPSFKKRKLEILREGGLEVTAVDLDARPSVIQANVSMSPQHQQQQQQQQQQQQQQPLPATMKSTEEKQPSISPYPPPVTPNSIPKLISVTVTPDIGHMLPSPHDHQNHQPRISVVKQLPAHHNNNNISMMNNNNVTNSRVINLGNSNNTALLQLYANANVAPSTIPSAQHPNHRFVPPNIPNGRLLPPKVTQSRSIFVHNERTVYGNPKDILSSPPKYRLPHPHLHPHPHPHPHQQQQPPQPQQRSQHPQMSSSNDIGQGGVLDLTQKSDEKPTFPRPSLEIVRVPVVQRPNPLNLDVRNSPVKDKPSDRPAADCPKRVPFPVYQNVIDSRTIASNNLEITLVNPKHKNNHHLMPPHVQIPSPPNKSNAIGVISSAQRRQQQPQQQMNGKYTVRSEPVSPYTPRKTSHPIIPNVPNLNHLNHSGSPFPRMQATTLQQQQQQMSIDRRKAAAEAGRDHQHRRISEGEKSSLAAQQQQQQHQESRQSEAGRRHSLPSIPSGFVPTVPQNNSTAYPMPQLPNASGKFLPILDPMYYSFYNGLFPPPIPPTAAAAAAASSFLPPEFSAYYKELLASSQPRLTGMMGQPPPHQQPAAPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01254583;
90% Identity
iTF_00126486;
80% Identity
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