Basic Information

Gene Symbol
Arid4b
Assembly
GCA_030770225.1
Location
JASTWK010000439.1:61489-70805[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.8e-27 1.1e-23 84.6 0.1 1 89 332 419 332 419 0.95

Sequence Information

Coding Sequence
ATGGCGAGCAATCGAACAAGGACAAATGTCATTTCGTTAGACAAAGACAGATCCTATagggaaaacaaaattagaaagGGAGACGATCCACCATCCCTATCGGTGGGTACAGAAGTTAGCGCTAAATACAAGGGTGCCTTCTGCGAAGCAAAAATCCGTAAGGTAGTACGATCAGTGAAATGTCGTGTAACTTATAAACCACAAGGTTTGGGAACTGCTACGGTTGCCGATGATCAAATAAGAGGGACTTTAAGAGTAGGCGCCTCCGTCGAAGTTAAACATGTAGATCGGAAAGAACTTGTGGAAGCTACGATTACAAAAATCCAAGACTGCAGTCAATACACTGTGGTTTTCGACGATGGAGATATTACAACGTTGAGAAGAACCGCGCTTTGTCTGAAAAGTGGACGGCACTTTGCAGAAAGTGAAACGTTGGATCAACTTCCGTTGACTCATCCAGAGCATTTTGGGAACCCTGTAATTGGAGGTAGAAGGGGTAGACGATCAAGGCAAGCACAGGATGAAAGTAGCGAAGATGAGGACAGTCCACCACGAGGCGCTCGTGACTCGGCTTCCAGCGGAGGTGCGAAAGAAGGGATGGAAACTGAACCAGAAATTGGTAGAGTGGTTTGTGTAGAACTCGgtgataaaaagaagaaggacAATTGGTTTCCAGGATTAGTGGTTGCACCTACTGCTCAAGATACAGTAAGAATACGAGTGAGAGATGATTATTTAGTGCGCTCGTTTAAAGATGCGAGATAttATACAGTACCCAAGAAGGAAGCTACAGAATTCACGAAAGaattagttaataaaattgaaaacagtACTCTGAAGGTCGCAGTAGAGAAAGCGCttttatttttagagaaaaatgaaTTGCCACCCCATTGGGACAGGGATTCCCTCTTTGGACATTCTGTTTCTAGTGGGAATAGCGATTATGATGGAGAACTCGACTCAGatAGTTCAGATGATGAACCGCgtgaagaaaaagatcattttGTGGctcaattgtataaatttatggATGATCGCGGCACACCTATAAATGTTTGCCCGATGATTGGAACTGAGGATATAGACTTGTACCGGCTTTTCCGAGCGGTCTACAAATTGGGTGGTTACAATCGTGTTACGAATCAGAATCAATGGAAAGCCGTAACACGACGACTTGGTTTTACGATGCAAAATTCGGCGTCATTATACAATCTTGTAAAGCAGGCTTATAAGAAGGTCTTACACTCttttgaagatttttatagaaaattggGCTGTACTATGGTAAATCATCCGCGAGGTAGCATGCGCAAACAACGCCCTGGAAGAAGTCTGATCCGCGACAAAGACAGAAATACTCCTATACCACCGCCAGCACCAGCGCAAGTGAAAAGTGACAAGGATGAAGATGAAAAGAAAGTTGTGGAGGatgagaagaaagagaagaaggagaTTAAGAAGGAACAaatgaaagaagaagaagttgtcaagataaaaaagaaagaagaatctGAGGGAAACGGTAGCGGCCAGGAGAGTGATGTAAATGTGGAAGGAGATATCGAATcgtttaataatgaaaaatcacAAAAACCGACCACACAAATTTCTACGTTATCTCCTACTTCGTGCAGTACTACAACTGCATCATCCAGCCGGACCAAATCAAAAAGTAAAGACGATACCAAGAAGAAGGTGattgaaaagaagaaaacagaGACCAAGAAGCAAGAAAAGAAGGATGAGAAGGTCAAGGAAGAAGAAGCCACTAAGACAAGATCCAAGGCAAAAGATGATACTGTGAGAAATAAAGGTGCTTCCGAAGGGAGAGAAACTCGAACACCATCTAGAGAGGCAGACAAGAAAACGATGTCTAAGCAACGACGTTTAACGGatgaagaattaaagaaacgaGGAAGGAAACGCAAAGAATATGAAACAGAAAAGTCGCGCGTGGACGAACAGCTTACAGAGACCGCCCCTAGTTATAAAGGTCCCGTCGAGTGTGGTGACAAATTGAAAGTATATTATGGCCCAACACACGAATCCAAAGTTACTTACGAAGCAAAAGTCATCGAGATAGAAAAGGAAGGTCCAGAACCAATGTACCTTGTACATTATACAGGTTGGAACACCAGATACGACGAGTGGATTAAAGCGTCTAGAATCGCACAAAACATCACGCAAGCTCAAGGTAGAGTAAAGCGCGTCAAAGCAACTCCGAGGCCTCAAACTCCCAGCACAAATTCATCCAACAACGTCAAGTTGAAAGGTACTTGTAATTCGAGCGCTAATGCATCGCAAAGCCGACGCCGGGCGCAAAGCGTCGCTCCTACTTCCAGCACCGTTCAGTCAGCTTCAACATCTATAAAGGAAGccaaaaaggaagaaaaggagaaagacaAGGAAACAATACAACCAACTAGATCCACTACACCGCTATCTGTCGCTAGTTCTAGTTCCAGAACTAAAAGTCCTGCTACGCCCGCCAATAGGCTGACCAGAACAACAAGAAATGCAGAGTTATCCGGAATAGAGCATCGTAGGCGCACCAGAAGAACCTCGGGACACACGGACATATCTGTTGCATCAGAAAGCGAGGATAGTGAGGGTTACGAGTCTGATACCACCGAGCCTGAACAAACCAAAACTAGATCGAGAGGTATGGAAGAAAGAAAACGGAAGGAAGCGCGAAGTAGAGCAGAAGAGAGAATTAGAACAGACGATGTGATAAGTGATGGTGATGACGATAAAGACAACTTGGATGAACCACGTAAAGGTAGGCGTTTAAGAAGAACCCCTGGCAAATCTCAAGGTATCAAATCTGAACCTGATAGCGATCAAGAAGAACAACCGAAGGGCCGAGATTTCGATCTCAATCAAATACGATCTGAATTGAAAGGTTTCGACAAAGCTGTCAAGTTAGAGATAGTCAGGATGGAACCTGAAGACGAAGTCAAGTTGGATGAGAAGGAAAACTTGACTGCGATCACGGCGTCGCCCAAGTTGGAGAAAACTATCGATTCTCCGAAGGTGGAACTTGTCGAAACGAAAGTGGAAAGCACAGAAGacatatatgaatttaaagAACCGGAACCGTTCGAGTTTGAGGTAAGAAATAAGAGAGATACCAACTGTgataaagataaattgaaGAAGAGAATGTTCGAAGACGAGGCGAAAAGTCCgaagaagaaacaaaaaacgCCGGTTACAGCAACAGTAGTGAAGGAAACGAAATCGGAACCGCCAGAGAACGATTCTCGGAAGAAACCGAGGAAATTGTTTAGCAAGAGGTCTGACGATGCTCATGAAACGGTGACGACTGCTCCTAGCAAACCACAGATTGCATCGTGCGAGGACGTTTTCAATAAGCTGAGTGAGTCGTCTACGTCATCGTTCAAtcaattgaaattaaatgtcGCGGAAGAATCGAGTAATAAGGTGACTGGTTTAAATCTTTTGTTCAACGATTTGCCGGCAGACGATGAAGGCACGCGCGACGACTCTGAGGACCGTCTGGTAATTTCGGAGACCGAGGTATCGGAGACGGAACAAGAGAATGTGTTTACGTATCAACAAGACATTCAGTTCCAAAGTAGCAAATCGCCGGATACAGCAGAATCAAGCAAAAACGAGGCAAACGCTAAAGTTGAAGCAAAAGAAGAAACACCGATAATCAATACGAGCAGTAATAATACACCTGCTAACATTCCAGATCAGAAACAGAACCAAATCAAATCTTTGTCAAGTCAAGTCGCTGCTGGACAATCGCAGCCAGAATTGAAGATGTTGGATTCGAAGTTGCTTGATATCGTTCCAGTTCCATCGCCGATTGTGACACCGCCAGCTCCCATAAGCGCACGACTGCCAGCGACATCCACGATAGAAGAAAAGTTATCGGCCGCGATGGCGTTCCGAAGCAAAACTAAAGACATCAAGAAGACTTTGGACGAGGAAACACCTTATGTCGTGCGCGTAATCAAGACACTGAAGGAAAAGAAATTAGACACTCCTAATTTTCCGCAAAGAGGCAAAGACGCGGATTGCGTTATTCCTGCGGCCGAAGTAGATAAAAAACGCGAACACGAAAAGAACGATGAGACTCTACGCAGAGAAATCATACGCGCGATAACTAaacgaaaagaagaagaaatatcgAAGCTGAAGAAAGAAGTGGAAGATCTATCAAAGCCGAAGAAATTCTCAGAAACGAAAATAGTCCCTGAACGCAAGATCAAATTGCAGGAAGCTACAAAAGACGAAAGTTGGAGAAACGCCGGATATGAGATGTCTGATAAAAAGCCTGAAGAGGAATATAAAACAATGGatcagaaagagaaagacaaaattgaaaatcgtaaaaaacaAATCACTCAAGATATTATAGATTCCACGGATAGCAGTGATTCGGAACAAAGGCTTGTGATAGACAACGAAGAGCCGCAAGACGTTAAAGTATCGACATCTATCTTTGACGTGAAGCTACAAGCGGAATTGGATCGTATAGAAAATATGCAAGAGAGACACGCGAGGTCGCAGGTATTGAAAACTTCACAGAATATCCATCAACAGCAAGAGCAGGAATCTACGGAGTTCAAAATTGATGCAACACCCATTCTGATGAAGGCTGATGAAGAGGGCGAAACAATGAATTCGCTGCTATGCGAAGAAGAGATACCTGGCTCGCCGGCCCCACTGTCCGAGAACATCGAACAAGTCAATGTTGGTCCTTCATGCAGTCCACCAAAGAATGAAGTATTAGAAAATAACATAGTGCTGATGGAGATGCCTTTTGCGAGCGCACCGACCTCGAGTCAAAATACAACGAGCAGTTGCACCGCTACCCTCAGTATAGCATTACCAAAGACTATAGAAACGGCAATGCCGGTTTCGTTATCAATGCAACAGAACATGTCCTCGAACATGCGGCAGTcacaacaacaacagcagcaacaacaacaacagcagcagcagcaacagcacgTATTGGCTCTGATACCACCACAACGACGAGAGAGCAACGAAGCCGCACCGGTGATGGACAATACGCCGCCGACGACACCCGATTCGAGCATTTCCAACATTTCGGGCTCACCTAGAGACGAGAGAACCGGTGGTTCATCGCCAACTTCCGAGGATAATGTCAAGCTCAATCGCGACAGCTCCGAGGCGGATAACGACAGCGCGGGCAAGGGCCTAGGCTTCAGTGAGGACGACACCCTACCTAACTCTGAAAGTAACTCCGCGGACAAGATTCTTAAGCCGCCTGCCAAACGTACAGTTGAGGATATGCAGTCACCCAAGAAACgcaaaagaaacagaaaacaTTCGGAATGCGGTAGCGGCGGTGGAGGCAGCGTTGGTGTCGGCGCCGGTGTCAGTGATGGCATTGGTCTTGGCGTTGGCGTTGGCATTGCGGTTGGCATTGGCGTTGATGCTAGCGTTAATATTGGTGTCGGCATTGGTGTTGGCGTCGACGTCGGTGTCGGTATCGGTGTCAGCGGtaacaacagcagcaacagtaATAGCAGCAACAACGGTAGTGGTGACGGCAAAAATGGTGGTAGCAGTGGCAGTGGCGGTGACGGCAGCGGTGGCAACGGCGGTGATGGCGGTGGTGCCAATAACATTGGCAATGTTAGTGGTTTTGGCAATGGCACTGGCAGTAATGGTAGCAGCGGCAGCACCGTTCCGAAAAAACCTGGCAGACAGAACGGTAGGCATGGCAGATTCGGAGCTGGGAGCGACAGCGACGACACTAGTGAGGGATCCAATCTCTGCGGAGTCAACAACACACCGACAAATCATGCCAGCACCATCACCAACGTTCCCGATCTCAGTACCTACTCATCAAGATCACCGAGACCaacaaagtacaatttttacGTTGAATTGGATCCTGAATTGGATGGTAGTCAAAGAATAGCTGTACTACAGCAGAAATTAACTGAATTACGAAAGACATATAACGCTGTAAAGGTTGAGCTTGCTGCTATAGAAAGACGTCGAAAGAAACTAAGAAGGCGAGAACGAGAAGGTACTCAATAA
Protein Sequence
MASNRTRTNVISLDKDRSYRENKIRKGDDPPSLSVGTEVSAKYKGAFCEAKIRKVVRSVKCRVTYKPQGLGTATVADDQIRGTLRVGASVEVKHVDRKELVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGGRRGRRSRQAQDESSEDEDSPPRGARDSASSGGAKEGMETEPEIGRVVCVELGDKKKKDNWFPGLVVAPTAQDTVRIRVRDDYLVRSFKDARYYTVPKKEATEFTKELVNKIENSTLKVAVEKALLFLEKNELPPHWDRDSLFGHSVSSGNSDYDGELDSDSSDDEPREEKDHFVAQLYKFMDDRGTPINVCPMIGTEDIDLYRLFRAVYKLGGYNRVTNQNQWKAVTRRLGFTMQNSASLYNLVKQAYKKVLHSFEDFYRKLGCTMVNHPRGSMRKQRPGRSLIRDKDRNTPIPPPAPAQVKSDKDEDEKKVVEDEKKEKKEIKKEQMKEEEVVKIKKKEESEGNGSGQESDVNVEGDIESFNNEKSQKPTTQISTLSPTSCSTTTASSSRTKSKSKDDTKKKVIEKKKTETKKQEKKDEKVKEEEATKTRSKAKDDTVRNKGASEGRETRTPSREADKKTMSKQRRLTDEELKKRGRKRKEYETEKSRVDEQLTETAPSYKGPVECGDKLKVYYGPTHESKVTYEAKVIEIEKEGPEPMYLVHYTGWNTRYDEWIKASRIAQNITQAQGRVKRVKATPRPQTPSTNSSNNVKLKGTCNSSANASQSRRRAQSVAPTSSTVQSASTSIKEAKKEEKEKDKETIQPTRSTTPLSVASSSSRTKSPATPANRLTRTTRNAELSGIEHRRRTRRTSGHTDISVASESEDSEGYESDTTEPEQTKTRSRGMEERKRKEARSRAEERIRTDDVISDGDDDKDNLDEPRKGRRLRRTPGKSQGIKSEPDSDQEEQPKGRDFDLNQIRSELKGFDKAVKLEIVRMEPEDEVKLDEKENLTAITASPKLEKTIDSPKVELVETKVESTEDIYEFKEPEPFEFEVRNKRDTNCDKDKLKKRMFEDEAKSPKKKQKTPVTATVVKETKSEPPENDSRKKPRKLFSKRSDDAHETVTTAPSKPQIASCEDVFNKLSESSTSSFNQLKLNVAEESSNKVTGLNLLFNDLPADDEGTRDDSEDRLVISETEVSETEQENVFTYQQDIQFQSSKSPDTAESSKNEANAKVEAKEETPIINTSSNNTPANIPDQKQNQIKSLSSQVAAGQSQPELKMLDSKLLDIVPVPSPIVTPPAPISARLPATSTIEEKLSAAMAFRSKTKDIKKTLDEETPYVVRVIKTLKEKKLDTPNFPQRGKDADCVIPAAEVDKKREHEKNDETLRREIIRAITKRKEEEISKLKKEVEDLSKPKKFSETKIVPERKIKLQEATKDESWRNAGYEMSDKKPEEEYKTMDQKEKDKIENRKKQITQDIIDSTDSSDSEQRLVIDNEEPQDVKVSTSIFDVKLQAELDRIENMQERHARSQVLKTSQNIHQQQEQESTEFKIDATPILMKADEEGETMNSLLCEEEIPGSPAPLSENIEQVNVGPSCSPPKNEVLENNIVLMEMPFASAPTSSQNTTSSCTATLSIALPKTIETAMPVSLSMQQNMSSNMRQSQQQQQQQQQQQQQQQHVLALIPPQRRESNEAAPVMDNTPPTTPDSSISNISGSPRDERTGGSSPTSEDNVKLNRDSSEADNDSAGKGLGFSEDDTLPNSESNSADKILKPPAKRTVEDMQSPKKRKRNRKHSECGSGGGGSVGVGAGVSDGIGLGVGVGIAVGIGVDASVNIGVGIGVGVDVGVGIGVSGNNSSNSNSSNNGSGDGKNGGSSGSGGDGSGGNGGDGGGANNIGNVSGFGNGTGSNGSSGSTVPKKPGRQNGRHGRFGAGSDSDDTSEGSNLCGVNNTPTNHASTITNVPDLSTYSSRSPRPTKYNFYVELDPELDGSQRIAVLQQKLTELRKTYNAVKVELAAIERRRKKLRRREREGTQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00128745;
90% Identity
iTF_00884836;
80% Identity
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