Trug039786.1
Basic Information
- Insect
- Temnothorax rugatulus
- Gene Symbol
- cdc5l
- Assembly
- GCA_035220575.1
- Location
- JASTWL010002060.1:2928481-2929934[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.8e-12 4.2e-09 37.7 1.3 3 46 8 52 7 52 0.96 2 3 9.9e-12 2.4e-08 35.3 0.1 1 45 58 101 58 102 0.92 3 3 5.1 1.2e+04 -2.2 0.0 5 17 138 150 135 152 0.75
Sequence Information
- Coding Sequence
- atgcCGCGAATAAAGTATAATAAGTGGCTGAAGATAGAAGATGAACTCTTGAAAGCAGCTGTGCTGCAATATGGCACGGATCACTGGGGTTATATTGCCTCTCTCTTACACAGAAAATCAATACTGATGTGTAAGACACGCTGGTATTCATGGTTATCTCCATATGTGAGGAAGCCCGAATGGAGCCGAGAACAAGATGAAAAGTTGCTACACCTTGTAAAGTTAATGCCTGATCAATGGCAAGCTATCGCATCTATTATCGGTCGGACAGAATTGCAGTGCTTCgagcaatataaatatttacttGATCAAGctcaagagaaagaagaaggaggagacgATGCCATTCATGATTCTCGAAAACTTAAACCTGGTGAAATTAAGTCAGCTCTTCCAGACCCTTCATCTATGGATGAAGATGAATCGGAGACGTTGTCAGAGGCACGCGCCAGGCTGGCAAATACTCGGATAGAAGGCCAAACGTAA
- Protein Sequence
- MPRIKYNKWLKIEDELLKAAVLQYGTDHWGYIASLLHRKSILMCKTRWYSWLSPYVRKPEWSREQDEKLLHLVKLMPDQWQAIASIIGRTELQCFEQYKYLLDQAQEKEEGGDDAIHDSRKLKPGEIKSALPDPSSMDEDESETLSEARARLANTRIEGQT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -