Trug003681.1
Basic Information
- Insect
- Temnothorax rugatulus
- Gene Symbol
- ttk
- Assembly
- GCA_035220575.1
- Location
- JASTWL010000026.1:414014-416250[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-12 3.5e-09 37.6 0.1 1 45 361 405 361 405 0.96
Sequence Information
- Coding Sequence
- ATGACTACCTCTCAACATTTCTGCCTACGATGGAACAATCATCGCTCGAACCTGCTGTCCGTCTTCGAGCAGCTGCTGCACAACGAGGCGTTCACCGATGTCACCATCGCCGCCGAAAGCGGTAGGACGGTCAAGTGCCATAAGATCGTGCTGGCCGCGTGCTCGACGTACTTCCAGAATCTGTTCCACGGCCTGCAGGACCAGCATCCGATAATAATTCTCAAGGACGCTGGGTTTCCGGAGATACAGGCGATACTGGAGTACATGTATCGCGGGGAGGTGAACATCGCGCAGAATCAGCTACCCGATCTGCTCAAGATCGCGCAGGTGCTGAAGGTGAAGGGCCTGGTGGAGGAGCACGGCAACCAGAGCAACACGGCGCGCGATCTTCGCCGCGAGGATACGTCGATGGAGCCGTCGATATCGCCGCCGCCGGCAATCAGCACGAGCACCGGCGGTGGTAGCGGCGGCAGCCACTCGTCACCGCCGCACTCCACCGGCGGCTACTCCGGCCTTTACGGGAAATCCGCGGTCTCGCTCGACCGCGTTCAAAGTCATCCCCTCGTTGCGAGCTCGTTGCCGATTACGTGGCCGCTTCCGTTGCACTCCGCGGCCGCGGGTCATCAGCTCCCGACGTCGCTCTCCTCCTCCGTCCTCGTTGGTAGCGCCGGCGCCGCGGCCGGCGGGTACGACAACGGTATCGAGACCTCGTCGCTCAAACGCCGGAAGCCGATGCAGCCGTCGTCGGCCCTGCTGATGAACCACGACACGCCGATCTTGCGCACGGTGCTCGGCCAGGCTCACGTTGACAGTTCGCAGACGATGCAGCCGCTGCTGCAGCCGGACAGCCACGAGTCGGTGCACTATCGCAACGCGAGCAGCAACGGATCCGCGAACGACAGCGACAATCGCCGCAGCAACGACCTGTCCCACGGCGAGGCCGCCCATGCCGACGTTTCCTACATGGACGAGGATGAGAGACAACCGTCCCCGCAGTCGTACGGCGGGGATACCGTGAGAAATACAGCTGCTCCGGACTGCGTGCCGCAAAAACCAGAGTGGAAACGCTATAAGCAGTACACCCGGGAAGACATCTTGTCGGCGATCGAGGCGGTGAAGACGGGGATGAGCGCCGTCGCGGCGGCGCGAAGATACGGGGTGCCATCGCGTACGCTTTACGACAAGGTGAAAAAGCTCGGCATCCCGACGTCGCGGCCGTTCAGGCGCTCGACGAGCAACGGCGGTAGCACGGCCTGCTTCCCGTACGGCATCGGTGCCAATGCGAACGGCGCTCTATACGACAACAACCGCGGCGGTGTTAACGCCCTGTCCGAGAATGAGAACGAGAGCGGCAGCAGTAACATCAACGTCATCGAGAATTTGGCCGGCACCAGTGCCGCCGCAGTTTTTGAGACCACCTACGCGAAGGCAACGAAGGATACGTCGCAGGACCGCGACTCAATGTCAGACTCGATGACCCGTTGCAGCGCGAGTCCGGTGATACGCTGCTCTAAGCAGagacagcagcaacagcagcagcagcagcagcaacagcaggaCCTGGATGATCAAGTAGAAGATCTGTCGGTGAGTCGCAAATCCGACGTTCCGGTGATAATACCGCCGTCCACTACATCGGTCGCGATTAAAGACGAGGCGCAGGAAGCAGGGCTTGATAGTAACGACTGCTGCGACTACAGCTAA
- Protein Sequence
- MTTSQHFCLRWNNHRSNLLSVFEQLLHNEAFTDVTIAAESGRTVKCHKIVLAACSTYFQNLFHGLQDQHPIIILKDAGFPEIQAILEYMYRGEVNIAQNQLPDLLKIAQVLKVKGLVEEHGNQSNTARDLRREDTSMEPSISPPPAISTSTGGGSGGSHSSPPHSTGGYSGLYGKSAVSLDRVQSHPLVASSLPITWPLPLHSAAAGHQLPTSLSSSVLVGSAGAAAGGYDNGIETSSLKRRKPMQPSSALLMNHDTPILRTVLGQAHVDSSQTMQPLLQPDSHESVHYRNASSNGSANDSDNRRSNDLSHGEAAHADVSYMDEDERQPSPQSYGGDTVRNTAAPDCVPQKPEWKRYKQYTREDILSAIEAVKTGMSAVAAARRYGVPSRTLYDKVKKLGIPTSRPFRRSTSNGGSTACFPYGIGANANGALYDNNRGGVNALSENENESGSSNINVIENLAGTSAAAVFETTYAKATKDTSQDRDSMSDSMTRCSASPVIRCSKQRQQQQQQQQQQQQDLDDQVEDLSVSRKSDVPVIIPPSTTSVAIKDEAQEAGLDSNDCCDYS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01408388; iTF_01407501; iTF_01407502; iTF_01407163; iTF_01407164; iTF_01406652; iTF_01406413; iTF_01405886; iTF_01405610; iTF_01408990; iTF_01409309;
- 90% Identity
- iTF_01408990;
- 80% Identity
- iTF_01408388;