Trug041680.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Temnothorax rugatulus
Gene Symbol
ct
Assembly
GCA_035220575.1
Location
JASTWL010002067.1:3210936-3216063[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.2e-32 1.8e-28 99.7 0.0 3 77 318 393 316 395 0.96
2 2 9.2e-31 7.4e-27 94.6 0.0 3 75 549 622 547 626 0.95

Sequence Information

Coding Sequence
ATGCCAGCATTCGCACGTGGACCACAGGATGGTGGTCCACAGGAAATGAGTGACGAAAGATTGGCACATATTCTCTCGGAATCGGGCCATATGCAAATGCGAGGTGAGCACGAGATATCGAACGACGCTGACAGCAAGAGTCCGAGTAGACTCGGTTGCCCGAGTCCGTTCAACAAAGACAGATTGGACAGCCAAAATAGGAGACTGAAGAAGTACGAAAACGACGACATTCCCCAGGAGAAGGTGGTAAGGATTTACCAAGAAGAATTGGCCAAGCTGATGGGCACGAGAGTGGAAAATCTTCGTCCGCGAGAGTTCCCTAGCGCGATCTTTCCGCATTTTTTCAGTGGTACCCAGGGCGGTCTTCAAGGCATCGAGCGCACCCAGGAAGACATTCGACTAGCATTGGATGCTTATCACCGTGAGCTCCAAAAATTGAATGCCGCACCAGGTCAGAATCCCTCGATGGCCGGATTGCCGGGATTGCCTGGACTACCAGGTTTGCTGGCACTTCAACAGCAAGCTCTTCAACAACACCACTTAGCCGCGAATGGCGGCGGCGGTGTTCAGGACTTGAGTTTAGGCAAAGTGGATCCGCGCAATAAAATGATAAACGGTGTgtcggaagaagaaaaagagaagatggAAGAGGCGATGAGACACGCCGGAAGTGCATTCTCTTTAGTAAGGCCAAAGCAGGAATCGACGGGTCCTCAATCAACGCCCGGCGGTTCCAGCGCGAGTTCACCGCTTGGCAATTCCATACTTCCCCCCGCGATGACACCCAACGAGGAATTCTCTAGTGCAGCGGCAGCCAGCCCTCTTCAGAGAATGGCCTCTATCACGAACAGTCTGATAAGTCAACCGTCCACCCCAACTCACCATTCGGCCAATCAAAGACCGTTGAAAGCCGTGCTTCCTCCGATCACCCAGCAGCAGTTCGACCTGTACAATAATCTTAACACTGAAGATATTGTAAAGAGGGTGAAGGAACAGCTGTCTCAGTATTCGATTTCACAGCGGCTATTCGGCGAATCAGTATTGGGTCTATCTCAGGGATCAGTGTCAGACCTCCTCGCGCGTCCAAAACCATGGCACATGCTGACCCAAAAGGGTCGTGAGCCCTTTATCCGGATGAAGATGTTCCTCGAAGATGACAACGCGGTGCACAAGCTCGTCGCCAGCCAGTACAAGATCGCGCCGGAGAAGCTAATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCTTGTGGAACACCTATGAAACCTATGCCGCCAACGAAACTCGTCCAAGAACAGCTTCAGAACGCAGCGAAGGCGCAAGCCGCCGCTCAAGCAGCTGCGCAAGCAGCGGCGCAACAGCATCAGCAGGAGAATCAGATGCAGCTCGGCCCACCACAACAAAGTCCTCAGCATCCGCAGCATCCGCAGCCGCCACCACCGATGATGTTGACCCCGCCCGGACCTCATCATCCTCATACTCAGCTCAGCATGCAAGAACTCCAAAAgaaacaacagcagcagcagcaacaaatGTCACTACACTCGCCGCATCATCAAATGGCACCGTCGCCTCTTCGAAGTCTTCATCCGCACATTTCACCAAGCGTATACGAGATGGCCGCCCTTACGCAGGATCTCGACACACAGACAATCACAACGAAGATCAAGGAAGCGTTACTGGCTAACAACATCGGCCAAAAGATCTTCGGTGAAGCAGTTCTCGGTCTGTCGCAGGGCTCCGTCAGTGAGCTACTGAGCAAACCGAAACCATGGCATATGCTCAGTATAAAAGGCCGGGAGCCTTTCATTAGGATGCAACTTTGGCTGTCAGACGCACACAACGTCGATCGACTGCAGGCGTTGAAGAACGAACGACGAGAGGCGAACAAGAGACGACGTAGCAGCGGTCCCGGTCACGACAACAGCTCCGACACTTCGAGTAACGACACGGCCGAGTTCTACCACGCGGCATCACCTGGTCCGGGACCCACTACCGGGAAGAAGCAGCGCGTTCTCTTCTCGGAAGAACAGAAGGAAGCTCTCAGACTCGCCTTCGCCTTGGATCCGTATCCCAATGTGGCCACCATCGAATTCCTTGCCGGTGAACTCGCCCTGTCCTCGAGGACGATAACGAACTGGTTTCACAATCATCGAATGAGACTGAAGCAACAGACGCCGCACGGCCAACCGGAGCCGCAATCGCCACGAGAACCCGGCCAACCGTTCGACCCTGTTCAATTCAGATTGTTATTGAACCAAAGACTGTTGGAGATTCAAAAGGAGAGACTGGGTTTAGGAAATGTACCTTTACCTTACTCTCCGTACTTTAATCCTAACCTGGCGGCCCTGGTAGGTAATGCATTGAAGGAACAATGCTCCGGTCTTGACCTCTCCATGAATGCCCTGAAGCGAGAGCCCAATCAAGAATTCGAGGACGAGGACGTCGAGGACGCGATGAGTAATCTAGGTAGCGAAGATTCGGAAGGTTCGGCGGGCAGTATAAAGAGGGAACCCACAGAAACACCGACGGCACCCACGACGGCCAGGTCCAATAGAAGAAAACCCGCGGCACCACAATGGGTGAATCCAGAACGGACGATTACTGGAGTAAAGAGAGAGGCCGAGGAAACTATAAGAGTCGAGCCGACACCAGTGCAGGATCGATACGAAGAGGATGCCCAGAGCGATGTCTCTTCCGTGTCGGGCAACAATGGGGCCGATCGGGATAGCCCGCTTCCTAGTCCAAAGTCTGGTCAGAACAGTCCAACGACGTCGCTCAGACCGCCGTCGGCGCAACAGACGCAACAGTCCACGGAAGAAAGTCCGAAGGACGTGGTGAAACACGAACCGGAGGAAACGTGGGATTACTAG
Protein Sequence
MPAFARGPQDGGPQEMSDERLAHILSESGHMQMRGEHEISNDADSKSPSRLGCPSPFNKDRLDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGTRVENLRPREFPSAIFPHFFSGTQGGLQGIERTQEDIRLALDAYHRELQKLNAAPGQNPSMAGLPGLPGLPGLLALQQQALQQHHLAANGGGGVQDLSLGKVDPRNKMINGVSEEEKEKMEEAMRHAGSAFSLVRPKQESTGPQSTPGGSSASSPLGNSILPPAMTPNEEFSSAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDLYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQQHQQENQMQLGPPQQSPQHPQHPQPPPPMMLTPPGPHHPHTQLSMQELQKKQQQQQQQMSLHSPHHQMAPSPLRSLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPTTGKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPLPYSPYFNPNLAALVGNALKEQCSGLDLSMNALKREPNQEFEDEDVEDAMSNLGSEDSEGSAGSIKREPTETPTAPTTARSNRRKPAAPQWVNPERTITGVKREAEETIRVEPTPVQDRYEEDAQSDVSSVSGNNGADRDSPLPSPKSGQNSPTTSLRPPSAQQTQQSTEESPKDVVKHEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01354489;
90% Identity
iTF_00765420;
80% Identity
iTF_01408052;