Tnyl016541.1
Basic Information
- Insect
- Temnothorax nylanderi
- Gene Symbol
- lov
- Assembly
- GCA_030848795.1
- Location
- JASTWM010000203.1:121415-124778[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.9e-15 3e-12 47.3 0.0 1 44 539 582 539 583 0.95
Sequence Information
- Coding Sequence
- ATGTCGAGCGTCGGGAACAGTCCTAACAGAATGGCTCTGCAATCGCACTATTCCTTACGATGGCACAACCATCTCGCCCATATACAACGGGCGTTCGAGGAGCTGCTGCACGCGGAGACGCTCGTCGACGTGACCCTGATCTGCGCCGACAGCAGCGTCAAGGCACACAAAGTCGTCCTGAGCGCCTGCAGTCCTTTCTTCGAGAGGATATTCGCAGAAAATCCATGCAAGCACCCCGTGATCGTGCTGAAGGACTTCTCGCATCATGAGCTGTCCACTTTGGTACATTTCATATATCGCGGCGAGGTGCAAATCGCCCAGGAGGAGTTACCGGGACTGATGAAGGCCGCGGAGTGTCTGCAGGTGCGTGGGCTGTCGTCATCGGAGCCGAGGCCGGTGTCGACGGAGCCCAGGCCGTCGTCGTTGGCATCAACGCCGACGCGCGATCTTATCCTGGCCGAGTTACCGACGCCGGAAGTCGCGCGACACGGCACACCCGAAGAGGACGAGAACCAGCTGGAGAGCACGAGGGAGATGAAACCCATTCTGTTTCAACCAACGAGGGACCACCCGGCCAAGCCGCTCATTGGCCACATGAACTTCGGTATCCGCGAGAGCTGCGGCTCGCCGTCGATGCCACGCCGGAAACAGGCGCGTCCGCGCCGACGATCCGGCGAATTGCTGCCGCAAGATCTGAGCAGGCGCTCGACCCCGCCGGTCAGCTCGAGTCCGTTGACGAGCGTCCTTAATCTCAGCGGTGGTCAGCACCAggcgcagcagcagcagctgTTGCTGCAGCAATCTCAATATCATCAGCAACAATCGATTAACAACGCGCAGAaccagcagcaacagcaggaGGACATGGCGGAGAATCTCTCGATGAAGAAACCCATATCGCCGAGCGGACTGGATCAGCATCACGTGAAGACGGAGGGCAGCGAGGCAACGAGTAGTCCTCGCGGTTCGCCGCTCACGGGAACCAGTCTGTTGCATCATCCGGATGGTCCTATACCGGACATTCCGGCGGCCGTGGCGGCGGCCGTAGCGGCGACTGTAACATTGTCGCTACCGACGATGCCGACGTTGTCGCTGTCGCAGCCGCATCCTACCGAGTACCTGACAAGCCTCGGCCAGCTGACGAACCAATGGTTGCCCGGGCATCCGCAGAGTCaactgccgccgccgccgccgtcggcCCAGAGTCACCATCCACGCGAGGACAGTCCGCACGGTTCCGGGAGATCTCATCCGtatcagcagcagcagcaacaggaATCGGCGTTGCCGCGACGTAGCGCCATGGCGATGTTCACGCCGACCTTGGACGGCGTAACGGCTCTGGGTGGCGGACTTTTCTCACACCATGCTGCTACGTACGACAGAGGCAACCTCCTCGCGGATTCGATTCTCACGGATAATTTCAAGCCGGAGGCGCTGCAAAATCTCTTCGGTACGCCCAATCTCGGCCCTCCATCCACCAAAAAGACAAAAAAGCATCGAAGTGATAGTGACGCGCCACGTAGATGGACCGATCATAATCCTCGGGCACTAGCAGTTAACAGACCCAAGGGGCAACACAGCGCTCCGCGAGGAGGACCACCAAGGTCCTGGACGAATAACGAACTAACACTCGCCTTGCAACATGTTTGGGAAAAGAAACTAACCACGTCGCAGGCTAGTCGTATGTTTGGCATTCCCTACAACAGCTTACTGATGTACGTGCGTGGTAAATACGGAAAGAGTCTAAAGCTCGAGCAATTACGTAGGAACTGTACCGGCGCCAGCACCCCCGAAATCATGAATAACAATAACATCAAGCCCGTCCAGCAGTCCGCGCAGATGAGCCATGGGCTCACCGGATTGCCGCTGCAGCATCCGGGGGACAACGGCGGATATCCCCATCGCGGTCTACTTGGCAGTAATATACCGCAGCCGCAGAGCTTTTATCCGGCCGAATATGCTGCTGCATCGTTTCCTCTAGCAGTGAATATGGTGCATATGCTACCTCCGAGCGAGCAGAAGGCGTTCGAATCGTCCGCGAACCCGGGCGGCGACGGGGGCGGGGGTGCGTGCCTAGGAAGTGGGGGAGGGGACGGAACCGGCAGCAGTGGCGGTGGTGGCGATTTGACGAACTCGCAGACCAGCGAGACACCATCCCCCATTGTTGACCATCACCATCATCAGGAACCGTCGATGCAACCGCAACCAACGCAATCGGCGCCCGCGTTACTACAGCAGAACGGTTCCGATTAG
- Protein Sequence
- MSSVGNSPNRMALQSHYSLRWHNHLAHIQRAFEELLHAETLVDVTLICADSSVKAHKVVLSACSPFFERIFAENPCKHPVIVLKDFSHHELSTLVHFIYRGEVQIAQEELPGLMKAAECLQVRGLSSSEPRPVSTEPRPSSLASTPTRDLILAELPTPEVARHGTPEEDENQLESTREMKPILFQPTRDHPAKPLIGHMNFGIRESCGSPSMPRRKQARPRRRSGELLPQDLSRRSTPPVSSSPLTSVLNLSGGQHQAQQQQLLLQQSQYHQQQSINNAQNQQQQQEDMAENLSMKKPISPSGLDQHHVKTEGSEATSSPRGSPLTGTSLLHHPDGPIPDIPAAVAAAVAATVTLSLPTMPTLSLSQPHPTEYLTSLGQLTNQWLPGHPQSQLPPPPPSAQSHHPREDSPHGSGRSHPYQQQQQQESALPRRSAMAMFTPTLDGVTALGGGLFSHHAATYDRGNLLADSILTDNFKPEALQNLFGTPNLGPPSTKKTKKHRSDSDAPRRWTDHNPRALAVNRPKGQHSAPRGGPPRSWTNNELTLALQHVWEKKLTTSQASRMFGIPYNSLLMYVRGKYGKSLKLEQLRRNCTGASTPEIMNNNNIKPVQQSAQMSHGLTGLPLQHPGDNGGYPHRGLLGSNIPQPQSFYPAEYAAASFPLAVNMVHMLPPSEQKAFESSANPGGDGGGGACLGSGGGDGTGSSGGGGDLTNSQTSETPSPIVDHHHHQEPSMQPQPTQSAPALLQQNGSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01477024;
- 90% Identity
- iTF_00765461;
- 80% Identity
- iTF_01407511;