Basic Information

Insect: Temnothorax longispinosus
Gene Symbol: salm
Assembly: GCA_004794745.1
Location: QBLH01003868.1:13190-25181[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1.6e-05 0.0013 18.7 1.0 1 23 336 358 336 358 0.98

2 9 6.7e-06 0.00052 19.9 2.1 1 23 364 386 364 386 0.98

3 9 3 2.3e+02 2.1 3.3 3 23 752 772 751 772 0.92

4 9 2.9e-08 2.3e-06 27.3 0.6 1 23 778 800 778 800 0.97

5 9 4e-05 0.0032 17.4 2.6 1 23 810 832 810 832 0.98

6 9 0.0083 0.64 10.1 3.2 2 23 1126 1147 1125 1147 0.97

7 9 0.021 1.6 8.9 1.0 1 14 1153 1166 1153 1167 0.92

8 9 3.9e-07 3e-05 23.8 2.1 3 23 1385 1405 1383 1405 0.96

9 9 1.3e-07 1e-05 25.2 0.9 1 23 1411 1433 1411 1433 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1.6e-05	0.0013	18.7	1.0	1	23	336	358	336	358	0.98
2	9	6.7e-06	0.00052	19.9	2.1	1	23	364	386	364	386	0.98
3	9	3	2.3e+02	2.1	3.3	3	23	752	772	751	772	0.92
4	9	2.9e-08	2.3e-06	27.3	0.6	1	23	778	800	778	800	0.97
5	9	4e-05	0.0032	17.4	2.6	1	23	810	832	810	832	0.98
6	9	0.0083	0.64	10.1	3.2	2	23	1126	1147	1125	1147	0.97
7	9	0.021	1.6	8.9	1.0	1	14	1153	1166	1153	1167	0.92
8	9	3.9e-07	3e-05	23.8	2.1	3	23	1385	1405	1383	1405	0.96
9	9	1.3e-07	1e-05	25.2	0.9	1	23	1411	1433	1411	1433	0.98

Sequence Information

Coding Sequence: GAAGAAAATGACTTTACATCAGACGGCGAAGAGAGCGGTggtggaggaggaggtggcGAGGAAGCCGTGGATCTCACAGCGACGAGATCTCATCAGGGCGATGATGATCCTATGGAAGAGGATGAGGAAGAAGGTATCGATGAGCAAGACGAGCAGGATGAGGACGAGGAGGGCTCGCGCAAACAGATACATCATCGCCAAGATGCGGAGAACAATAATAACTTTGTGGAGAGCGGTCTACCTACCGCCATATTCCCACCCGCTGGAACTAGTCACGTCACCCTCGAAGCCCTTCAGAATACAAAAGTGGCGGTCGCCCAGTTCGCCGCCACTGCCCTCACTGGGGCAGACAGTGAAGCGGCGCTGCAAGACTTGGCGTTTCTGGAAAACACGCTGTGCACCCTTCAGAATCAACAGGTATTACAATTACAGCTGATTCGACAACTTCAGCAACAATTATTGATCACTCACGGGCAATCGGTAATGCAATCGTCGGCGACGGAGCCAACTGATAGCAAAGAGGCTTCGTCGTCCCCTATTATTCATCCGAAACCATTGTCGAGTCTCGCGTCACCTCCTTCTTCTCGTCCGCCGAGTCATCATCAGCAAACATCACCGGCGCCGCTGACGCCGAATCTGCTTCAGGAACGACCCACCTCGACGAGCAGCGCATCTCCTTTGAATCTACCCCTATCGTCGTCTGGCGCGACGTCGACCGTCATCACGACCACCAGCAGCCAAATGCCGATGCCGCATCAAATGCCGCCGCTCTGCTCGATAAGCGCTTCCCTTGCTTCATCGATCATAACGAATACCGATCCGCCGCCGCTTCACGAGCCAAACACTCTGGACATTCTTCAAAAGCGTACTCAGGAGGTATTGGATAACGCGAGTCAAGGGCTAGCCAACAATTTGGCCGACGAGCTCGCGTTTAGAGGCAAGGGCTCGCGACTCTCTCCTTACGATTCAAAATCGAGCGGTGGTCGCGGCGAGCCCTTCTTCAAGCATCGATGTCGCTTCTGCGGCAAAGTCTTCGGTAGCGACTCGGCGCTACAAATCCACATACGATCCCACACAGGTGAGCGACCCTTTAAGTGCAACGTATGTGGCAGTCGGTTCACGACCAAGGGCAACCTGAAGGTCCACTTCCAAAGGCACACGGCCAAATTTCCACACGTTAAGATGAACCCGAATCCCGTTCCAGAACATTTAGATAAATACCACCCACCCCTCTTGCAGCAAATCGCTTCCGGGCAGAGGCCGATGCCgtccccgccgccgccgccaccaccatcCTCTCATCACCCCTCGTTTCATCCGACAACAACGCACGGTTTCCTCCCACCACAACCGCCCATGCCTTTGAGTCTCACCTTATCCAATATGACGCCTCTTTACCGGTCCCCAGTTATTAATCACCGGGACGATCAAGATGTGCCGGAGAATCTTAGTAAAGTACCCATAACCACCGCTCCACAGACATCTCCCACTTCTCCCGCTGCCATGTTGAATTCTCGTCATTCCTTTCACGACAATATCCATCAACAACATCAAAAGCAGCAGCTTGAGCAAAGAGAGGAGATAAAGCTCGAGCAGAGATCGCCCGGGCAGGAGCAGTATCAACAGCGACCGATGAGCCGGGAAGGCGCCGAGCGAATAACACCCAAGAGAGAACCTGAGGAAGCGGAAGAAGCCGCGGAGGAGGAGAGCGAAGATTTTGAGGAAACCACAAGACGATACCTCAATTCACCCCAATCCGTGAATCCACCGTCCCAGCCGCAAACGTACGAGGATTGTAGTATGGACAGCAAGATCAGCGGACGTTTAGAGGGCGACGGAGAAATGGAAGTAGACGAGGAGACAGAAGAGCAACCTGAGAACCTTTCGGGCAGAGGTACGATCAATCGTTTGCCTCAACAGATCATGGCGTACCCGGGAGCATCGCCGGCCAGCAGTAGCGCGAGTAGCGGTAGTCTGCAGACATCCTTCGCCGGTATCCTGTTCCCAGGTCCGCCGGCTCATCATCAAATTCCCGGTCTTCCTGTTTCGACCCAGGTAGGACCAATTACGACGTCCGGAAGCGAGATGATCGATCCGGCCAAGGATCCAGCGATTTATTCGACTTTACTACCACGGCCTGGCAGTAATGACAATTCCTGGGAGAGCTTGATCGAAATAACGAAAACTTCGGAGACGTCCAAGTTACAGCAACTAGTCGACAATATCGAGCACAAGCTGAGCGATCCTAATCAGTGCATCGTTTGCCACAGAGTGCTCTCGTGCAAGAGCGCGTTGCTGATGCATTATCGCACTCATACCGGTGAGCGTCCCTTCAAGTGTAAAATTTGCGGTCGCGCCTTCACGACGAAGGGCAATCTGAAGACCCACATGGGAGTGCACAGAGCTAAACCGCCGCTCAGAGTGTTGCACCAGTGTCCAGTGTGTCACAAGAAATTCACGAACGCTCTCGTATTGCAGCAGCACATACGCCTTCACACCGGGGAACCTACCGATCTCAGCCCGGAACAGATCCAAGCTGCAGAAGTGAACGAGTTCCCACCCGGTTACCATCCGCTGGCGTCTTTCCTCCCGCAAGGATTTCCGCCGCTACATCCGACTGGCGCGAGCTTCTCCTTGGGATTCCCACCATCCAGGCAAACGGCCATCGAGCAACATTCGCACGAAAGTGACATTGACGCGAAAGAGGAGTCTCAACACCAACGACAGAGATTTATGGAGGAGCACAGCGAGGAGATGGAAGATCAGGAAGACGAGGAGCAAGATCACAGAGAGGACGACGAGAGGTGCGAATTGAATCGCGACAGGCGTAGCGTCGAAGTCGAAGAGGAGCAGGACCACGAGAGTCAAGATACGACCGAGCACAAGGACGTGACGCTTCCTATATTTTCGACCTCGTTGGCGGCGCTCGAGAATCAAGTGAGGACCATCACGACGACGGCCACGACTGCGAATGTAGCCAGGTCGCCGTCCTTTCACCGATACAACGGTAGCGAGAAGAGCACCAGCCCGCCGACCTCCGGTGCCCCGCTCGACCTGACACCCCGCGCTTCGTCCACGCCAGCGTCGGTGGCCTCAGCATCGCCGACGCCGCCACCCCAGACCACGCCGCATCATCCACCGAATCCCTTCGGCATGTTCGCGGGTCTACTTCAAGCGGTCTCGTCCTCTCCTACCACCAGCACGATAGGCACGTCGAACATAAACAGCGTCACCTCGATGAATGCCGTCAACCCGGGAAGCGGGCCCGGCAGCGGACCACTAGCCTCGCTGACCACTTCGGCGGTACTAGCCGCATCGTCGACTTACAATCCGCTCGGCCTAGCTGTCGGAGGCCCAGCAGTGCGTGGCAACACCACATGTAAATTCTGCTACAAGACGTTCGCGTGCCAATCTGCATTGGAGATTCATTACCGGAGCCATACGAAGGAGCGACCTTTCAAATGCACCATATGCGATCGAGGTTTTTCTACGaagAACGATGATTCCGGTCAGCAAGTATGTTCCTGCGCGGACCAACCCTTCGCCGCGAAGGGTCCGATTCTCCCACAACCCAATCCCCAATATCGCTCGTACCCGGCGAGACCGGCCGCCGGAAATAGTGAGAAACCGAAACGCAGGCGGCGGCGGCCTGAGGAACGGAAGAACCGGGGGCGGACAGGAACAGGAGGGGGGCGAAGGCTGACGTCTGTTTATCCTGCCGTCCGCCTGCCCCCGCTGATGCCACCCGCCCTCGGACTTCTACCCTCGGACCACGTCTTCCTGGGTAATATGAAGCAGCATATGTTGACTCACAAGATTCGCGATATGCCGCCACATCTGTTCAGCGATCCCAAGCatcaacagcagcagcagcagcagcagcagcagcagcagcaaccgCAGCAGCAACCGCCGCCGCAGCAACCGCCACAACCGCAGCTGCAACCGCAGCCGCAACCGCAACAGGATCAGGAGACTTCCAGAAGTCCGATGTGCGTCGACGATTCGAGCCTACCGCCCCCACCTCCGCCACCTCCACCACCCCCGCCGATGCCACCAACGTCCATTGAGTCTACGATACCGGTAAAGAGATCGCCGGAGGGAGAGCTGCCGGCACCAAAGAGACCAGCCAGCCTGCCGAGCAAGCATTTGTGCCAGATTTGCAATAAGAATTTCTCCTCGTCCTCGGCGCTCCAGATTCATATGAGAACTCACACCGGCGACAAACCGTTCCGATGCACCGTCTGCCAGAAGGCGTTCACCACCAAAGGCAACCTCAAGGTGCACATGGGTACTCACATGTTCACCAACGGAACGTCACGTCGAGGTCGACGGATGTCGTTGGATATACCTCCCCTGCCAATCACGCCCAAGGACTCGGAGTTTCTGCAACGGCGACCGGACCTCTTTTACCCGTATCTTCCCGCGCCGTTCCTTAACGGCGTCCAGCAAAAGCTGAACGAGATTTCGGTGATTCAAAGTAGCAACGGGTTACCGCCTCATTCCTTGAGCGCGGGCAAGTACGCGGCGAGCCTGTTCGGCTCGGTGTACGGTGCCGGCGCGGGTGGTTTCTCCCTGGACAAACAACCGATGGGGCCGACCAGCAACGGGCCTCTGGACGGCAAGTCCGCGATACCCTCGGGATCCATGCTCTTCCAAACACCGTCGCCCTCGCACTCGCCCGGCGCGTCGTCCAACGGCGGCAATCAAACGTCCGCCAGCGTGTCCTGGACCGGCGATACCCTTCAACATCATTTTGACCGAGAAACACCGAGTAGAACCGAGAATGACGCCACCCCGCCCACAGCACGGCTACCACCGCCACCGGCAAGGGGAGAGGGATTAGCCGCGTGA
Protein Sequence: EENDFTSDGEESGGGGGGGEEAVDLTATRSHQGDDDPMEEDEEEGIDEQDEQDEDEEGSRKQIHHRQDAENNNNFVESGLPTAIFPPAGTSHVTLEALQNTKVAVAQFAATALTGADSEAALQDLAFLENTLCTLQNQQVLQLQLIRQLQQQLLITHGQSVMQSSATEPTDSKEASSSPIIHPKPLSSLASPPSSRPPSHHQQTSPAPLTPNLLQERPTSTSSASPLNLPLSSSGATSTVITTTSSQMPMPHQMPPLCSISASLASSIITNTDPPPLHEPNTLDILQKRTQEVLDNASQGLANNLADELAFRGKGSRLSPYDSKSSGGRGEPFFKHRCRFCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVKMNPNPVPEHLDKYHPPLLQQIASGQRPMPSPPPPPPPSSHHPSFHPTTTHGFLPPQPPMPLSLTLSNMTPLYRSPVINHRDDQDVPENLSKVPITTAPQTSPTSPAAMLNSRHSFHDNIHQQHQKQQLEQREEIKLEQRSPGQEQYQQRPMSREGAERITPKREPEEAEEAAEEESEDFEETTRRYLNSPQSVNPPSQPQTYEDCSMDSKISGRLEGDGEMEVDEETEEQPENLSGRGTINRLPQQIMAYPGASPASSSASSGSLQTSFAGILFPGPPAHHQIPGLPVSTQVGPITTSGSEMIDPAKDPAIYSTLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLSDPNQCIVCHRVLSCKSALLMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLSPEQIQAAEVNEFPPGYHPLASFLPQGFPPLHPTGASFSLGFPPSRQTAIEQHSHESDIDAKEESQHQRQRFMEEHSEEMEDQEDEEQDHREDDERCELNRDRRSVEVEEEQDHESQDTTEHKDVTLPIFSTSLAALENQVRTITTTATTANVARSPSFHRYNGSEKSTSPPTSGAPLDLTPRASSTPASVASASPTPPPQTTPHHPPNPFGMFAGLLQAVSSSPTTSTIGTSNINSVTSMNAVNPGSGPGSGPLASLTTSAVLAASSTYNPLGLAVGGPAVRGNTTCKFCYKTFACQSALEIHYRSHTKERPFKCTICDRGFSTKNDDSGQQVCSCADQPFAAKGPILPQPNPQYRSYPARPAAGNSEKPKRRRRRPEERKNRGRTGTGGGRRLTSVYPAVRLPPLMPPALGLLPSDHVFLGNMKQHMLTHKIRDMPPHLFSDPKHQQQQQQQQQQQQQPQQQPPPQQPPQPQLQPQPQPQQDQETSRSPMCVDDSSLPPPPPPPPPPPPMPPTSIESTIPVKRSPEGELPAPKRPASLPSKHLCQICNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMFTNGTSRRGRRMSLDIPPLPITPKDSEFLQRRPDLFYPYLPAPFLNGVQQKLNEISVIQSSNGLPPHSLSAGKYAASLFGSVYGAGAGGFSLDKQPMGPTSNGPLDGKSAIPSGSMLFQTPSPSHSPGASSNGGNQTSASVSWTGDTLQHHFDRETPSRTENDATPPTARLPPPPARGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00417805;
90% Identity: iTF_01421750;
80% Identity: -